Contig Data
morexGenes
Links



Map Locations of contig_50881 (4504 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50881

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65924 1 2811 bp AK363404 Available Available None





CDS Structure of MLOC_65924






Contig Sequence (4504 bp)

>contig_50881 4504 assembly3_WGSMorex_rbca.fasta
TACTTATTTATTATATGATCCACCATTCATTCTCACAAAGTGCCTAGGAGCACGTGCTAG
AGCTGGCTATTAACTAAGAGCCCGCTTACCTTCTCTCTCCTCTAACTAAGCAAAAATATA
CTACTTTATTTCTTATAGCTATTGTACTTGCTCTGAAAGCATCTTGTTCTCCATCACTAT
ACTGATGCATCTAAGAGTGGTCCTCCTCTGCTCCTGATTCTGATAGTGAAATGGTGGATG
GGTTATGACAGTGAACACCAACGCTGGCAATTTCAGATGTTTCACCAATGAACAAGACAC
GATTAGCTTCCTAGCTGGTGGCAAAGGTCCAACACTATTTATTGCATTAATCTTCCAAGC
CCATTTACCATTCTGTTGTGCATGACCCCATCTTTAGTTTCATTTTTTGCAAATATCATC
AGTGTGCCACTAAACATGTTAAGTATGCATAACTCGGAAATGCCAAGTTTTCAAAAAAAT
TGTATATAATGTGCGATTTGTATCTCAGGACTCTAGTGCTACCATATTGGCCTTGACATG
ACTACTCCAGCATACATCCAACATGCCATGTGAACTAGAATCAAACTGGTTGCTCATGGT
TTGAATACGCGTGCACATATTAAAAAGTCCATGCAGCTAAGCATGAAGTAGACACTTCAA
GAACTACCAAGTGGCTAGATCTAAGAATAAGAGATTTTTAATCTAAGAATAATCCAAGAC
TAATTATAAACAAATTGAAAATGCTACTCTTGAGTACGGTAACTTGAATCTTTTACTGAA
GGAAACTAGTCACAGGTAAAGCTTCAAAAAAGAAGGGGAAAAAAACTAGTCACAAGCATT
CAAGCAAGACAAAAGATATATATATTCTAGAAATTCAGTGTCTAAACTGAGGAAGTGCAA
ACATGAGTTGTTTCCACAAAAGTCCTTCTCAGGTGAAAATTAAATAAAAATAAGGCAGCA
CCTTAACATGACAGCAACAGCAAGAACAAGGACCTGGAGTGCATCTGTTAGCCTTTCTAA
TCTTCTCAGTACCATTCCCATTTTATGGGATGTCCCCAAAGAGGACCACTCTCATTATCA
TCACCGCTAGTACTACAGTTCTAACAAACAATGGCATTTATCATACAACTAAAAATTGCA
AATTCATTAGCCATTTATCCATTGAAAAAACTGTGAAAGTGACATGGAGAAGGGAGAGCA
AGAAGCATACCGTGAAGCATGTTGGATACACTTCCCCTGCTGTAGTAATCGTACACGAGC
AGCTTCTCGTCCTTGGAGTAGTAGTACGCCCGGAGCTCCGCCACATTGTCGTGCCGAATC
CGCCCAATGAGCTCCATCTGCTGCTCGAAGTCGCGCCGCCCGGCACTGACCTCCTTGAGC
CTCTTCACCACCACGGTCGTCGCGTCCTCCAGCAGCGCCCGGTACGCCGTGCCGAAAGCT
CCCTTCCCAAGAACCTCGGCGGAGGCGTGGAGAAGGTCCTCCAGATCGAACGCCAGTGAC
GGTCCCTCGAAGAACACCAGCCGGTTGCCGTCCCCGGCCTTGCCGGTCACCGCCTTGGAC
TCCGGCGACTCCCTCCCCTTCTTGTCCCCGCCCTTCCCGGACAACGTCCGGCTCCCGTCC
TCGCTGCCGCCCCGCCGGTTGCAGAAGGCTATCAGCAGCACCGCCACGACCGCGAACAGC
ATGACGCACCCACCGACGATAATGGCGAGAACGACCGCCTCGCTGAGCCGCGCCCGTTTC
TTGGCGGGCGCGCCGGCCGCCGGCGGGGCGAGTGACGGTGGAGGAACCGCTGGCGACAAC
GGCGCCGACCGCGTCATGCTGTTCCCGGCGAAGGAGGCGTCCGAGAACCTGAGGAAGGAC
CTGGGCACGGGGCCGTCGAGGTGGTTGTTGGAGAGGTTGAGGAACTGCAGCGCCGGGAGG
CCGAGGTCCGGGACGCGGCCGGAGAGCGAGTTGTTGGAGAGGTTGAGCGCGACGAGCTGG
GTGAGGTTGGACAGGCCCCAGGGCAGGGTCCCGTTGAAGCCGTTGAAGGAGAGGTCGAGC
ACCTGCAGCGTTTTCAGCCCCGCGATGCCGGACGGCAGGGCGCCGGAGAATGCGTTGCGC
TGGAGGTGGAGCCCCGCGAGGCCCGGGAGCGCGAGCAGGTCCTCCGGGAAGGCGCCGGAG
AGGCTGTTGGCGCGGAGGCTGAGCACGCGGAGCGCGGTGAGGCGGGCGAGCGTGCGGCGA
GGCACGGGGCCCGTGAGGGCGAGCCCCGGGAGGCGCAGCTCGACGACGCGCGAGCCGTCG
GCGCTGCAGGTGACGCCCGTCCAGTTGGCGCAGACGGGACGGGTGGCGGACCAGTTGATG
CGCCCGGCGCGGCCGCCGCCCACCCCCGCGAGGAAGTCCAGCAGCGCCGCCCTGTCGGCG
TCCGGCTCCGGCGCCCCCAGCATGGCGCTCAGCAGCAGCAGCGCCGCCAGGGTGAGCAGC
CGGGGCGGCATGGCGCCGCACTCTCTCCTGGTGCGGGTGGGTGGTTTCTTGGACGGAGCT
GTGGTGCTCTGCTGCTACTTAGTTGGATCTGGGTAACGGAGGCGCGGAGTGGAAGGGACG
GGTAGGGAAGGGAAGAAGGTGGCTGCTGTGCGGTGCTTGGGGTGGGGAAGTGTGCGTGCT
GTGGGAGGCGGGGCGGGTCTACGACGGCGCAGCGGGAACGAGTCGGTAGGGGGGGTCGTG
GATTCGTGGAGCTTGTGCTGGATTTGTGGGAGCTGCATGTGCGGGAGCGGCGGGGTGGTG
GGGTGGTGGGTTGGGCGTGGGCGTGGGCGTGGGCGTGGGCGAGGGAGAGCGGCACGGCGG
GCCGCGCTGGGGTGTTGTGTGGTGTCGGTCAGATGGGCACCGCGCGGCGAGCGATTGGGC
ACGAGAGGGGTTTTGTGTGCCGGGGGCTCTCGCGTCGTGCAGTCACGCCCTCCCTCCACG
GCAGCAAAACCTAGCCTAGCCTTGGTCCATCCATGCCTCCATGCCTCCATCTCGATTGCT
GCTTTCCAAATTGGTTATTACGATATTTTTGCCGTTGGGATTTTGATAAGATCGGTCCGG
GTGGGCAAGGTGGTTGCACCGCATAACTTGGAAAGCAGTCACTGGACGATGCCGAGATCG
TTCTGCACTTGGGTGATTCGATCGCACCAGTACCATATTCTTGTTTCAAACTAAGGCGCA
TTAGTTTACTCGGTTAACCATGTGCGAGTGATACGCTTTACATGCCCTAACATGTCTTTT
TACAAAGTCAAAAGCCACACACACAAAAAAAAGCGCTGCGTTGGCCATGGCGGATACAAA
GTCGGAAAAAACACCCTGTGCTCAAGTACCACTGACAACGTTTGCAAGCAGTAGACACAT
CCACATCAACAAAACAAACCGAGGCAGCACGGTTTATCTTTGGAATTCAGATGGCGCGAA
AAGCGAACGATTCCTTTGCATTCTGCACAAGGAGAAAAAAAACGGAAGCGGCCATGATGA
TTGAGCCCAGCAGAAGCTGCCGCTTGGCTGCTCGCTTTCACCTTTTCTTTTTGTCAGATC
ATCCAGACAAGTTTGAACGTGTCAGGCCACCAGGAAGAAGAGCTATTCCTACTCCTTCTA
TCTCGCTTCTGGGCCACTGCCATTCGAAAGCATCATCAGATCGCAATCATGTCAACGGGG
GAATCAAACAAAAAACTATACTTACTACTAGATTAATTAGCACAGCCTACTAGTAATTGC
TTTTCGGCTTCAAACAAAAGAGGAACGGCTGCTCGCAAGTTGTGCATGTGTACTTACACG
TACACGGTACACGTCTCGTCGGCCTTTAGCATGTGATGATGATGGGTGCATCATTATCAT
TGTTCATGATTCGGGAGTCGTTAATTTAATTGTTCGTAGGAGAAGCAATTAGGTCATCAT
TATGTGCACCAACCGCTGTCTGTTGGCGACTTGGCGTACTAGTGGTGGCATGGAAATGGA
GGATTGGATTAGAGGTACCGATGCATGCATGCACGTGCTAACGTGCAACCTGAGTTTGTA
CGCTCAACGGTGTTGAATGGATTTCAGGTCTCAAGATGCTAACAGGGAGATGAAAAAAAA
ATGCTAACAGGGGAATACCTTGTCAAGGCCATACTCTTAGGATTGATCGTTTTATTGCAG
GAGCTAAAAAAATTAAAAATCGATGCAGCTTTTGAATGTGCAAAAATTCCAGGTCTTACT
CGTGGAGCAACGGCTACTCGTATTCGAGTTTTTTGCTGGATCAAAAAGAAGTGAATGTGC
AAATTCAAGCCTCTACTCGAGTCATCACCTCGGGTCTTCAAGCATAGGCTATCGCCCTTC
TCCTTACCGCAATTCTCCTTACTGCACAGGTTGTTCATCAGCTTAGGATCTCTCGTCCTA
CATTTCTTATTGATTATCTTTTTTTGGCAAAAGCTGTTAGAAACATTGCATGGAGAAAAA
AAAATCCACGCACACATAAGATATATCCATGGTGATGAACATCTATGAGAGGAGAGATTG
GATC