Contig Data
morexGenes
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Map Locations of contig_50815 (5081 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_50815

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65880 1 1012 bp AK377145 Available Available None
MLOC_65879 4 1821 bp AK354945 Available Available None





CDS Structure of MLOC_65880






CDS Structure of MLOC_65879






Contig Sequence (5081 bp)

>contig_50815 5081 assembly3_WGSMorex_rbca.fasta
GGGCGCACCGTCACCGGCCGCCTCGCCTCCCGCCCACGCCCCGACGCGGGCCAAGCCTTC
GCCGACGCCACCTCCCGCGGCCGGCCACCACCCGCAGCTGCCCACGCCGGCCACGGCCGT
CGACCCGGCCAACCAGCACGGCAGGAGCCCCAACAAGTCCTCCACGCAGTCCGCCGGGGA
CCGGGGCGGCAGGGCCTCGCCCCCGCCGGGCAGCAACGGGACGGCAAGCAACAGCGTCGT
CATCGCCGTCGGCGCCGTGCTCGCCTTCCTCGTCGTCACCCTCATAGCGGCCGCCGTCCT
CTACACCAAGAAGCGGAGGCGGGGGAGGGACGACTACCGTCCCGGCTTCAGGTCGCCGCC
CTACTCTTCAGAGCTGCCACCCTCCTCAGGTTCAGGTACCTACCACTTCACTTCAGTTCA
ACCTGATGCTGAATGTGAATTCAGTCCACACTCACACTCACTAATTCAGTTCAAACTGAT
GTTTTTTGCAGTTCCTTCGGGCTCGGCGAACGCGGCGTTGTCGTCGTCGGCCGACCCTTC
CGTCCACACCAACTACAGCGCCGGGAGCCCGAGGCTGAAAGCGTGCGTGTCCGACATGAG
CATGGGCAACTCACGCTTCTTCACTTACCAAGAAATGTACCAGATAACCGACGGCTTCTC
GCCAAGCAATTTGCTCGGCGAAGGAGGGTTCGGGTCCGTGTACAAAGGACGCCTGCCCGA
AGGGAAAGACGTGGCTGTCAAGCAGCTGAGGGACGGCAGCGGGCAAGGGGAACGCGAGTT
CCAGGCCGAGGTGGAGATCATCAGTCGCGTGCATCACCGGCATTTGGTTTCTCTCGTGGG
GTACTGCATTGCCAATAGCCAGAGGCTGCTCGTCTACGATTTCGTGTCGAATGACACCCT
GCATTATCATCTTCACGGTAAGCTTCTTAACATTTTGTCAATATTGTTGTGCAAAGAGCA
TTGCCATATATAGCTTCTGGCTGTACAAACTGAGGTGGTTCTGAAATGTTTGCGGCCGCA
GGACAGGGAAGGCCTGTTTTGGAGTGGCCGGCTAGGGTTAAAATCGCTGCCGGTGCTGCT
CGTGGAATAGCATACCTGCATGAAGATTGTAATGCCCTTTCTTGCCATTTTTTCTCATTT
TTCCCGTTTATTATTCCGGTTTTGTGTTGACCCGTCTGCCTTCTTTGACCAGGCCATCCA
AGGATTATCCACCGAGACATCAAATCCTCAAACATTTTGCTGGATAATAACTTTGACGCA
TTGGTAATTGCATTCCCTAAACGAGCCTGAGAACATCTCATGATTTAGTTCATTTGCTGA
TAAGATGCTATTCGTGAACTCTAGGTGGCTGATTTTGGTCTTGCAAGACTGGCTTTGGAT
GCTGTGACACATGTGACTACACGGGTTATGGGGACATTTGGGTGAGCAAAGTACTGGCAA
ATTCATTAGCATATACTATGATCATATAGAATTGATGACTAAAAAAGTTCACCTTTTCTT
TCTTTCTTTCCTGCAGATACATGGCTCCAGAGTATGCATCAAGTGGCAAGCTGACTGAGA
AATCCGATGTGTTCTCTTTTGGTGTTGTTCTTTTAGAGCTTATGACCGGTCGAAAGCCCG
TCGATTCATCAAGACCATTGGGAGATGAGAGCCTTGTTGAGTGGGTGAGTTATTGTATTT
TGTGTGATAGCCTTGTTCCTATGTTTTTGTTGTTGATTAGAATAGTCATGCCGTACAAAC
TTACTTCATGCATGTATAATGTATTAGTAGTTCTAGAGGTTATAAGTTCAAATTTCACTT
TAAATGCCGGGTTTCTGTATTTGTATTTTGTGTGATAACACATCATGATTTATCTTGTAT
AGAAATATTCTGGCGTTTCTTCCTCACAACATTAACTTGGGTGCTTATTTGCTCTTTATT
TAAATGGACATGTAGTTCCTCCCACATGTTCCTTCATTTAGTTGGTCTGTCCTTGTTTAA
TTTTTTTTTCAAACCGACATTATTTGCAGGCTAGACCATTGCTTAGTCGAGCTCTTGAGA
CCGGAAAGCTGGAAGGGTTGGTCGACCCTAGGCTTGAGAAGAATTTCAATGAGGTCGAAA
TGTTCCGTATGATTGAATCTGCAGCAGCCTGCATTCGACACTCGTCATCAAAGAGGCCCA
GAATGAGCCAGGTACGCATGAACATTGTCTATCTGACCACTTTATATTACTATCATATAC
TCCCTCTATACCTAAATAATTGTAGTNGGGGAGAACTAGTTTAGTTCTCCCCAACTACAA
CTATTTAGGTATGGAGGGAGTAGTATTATGTGGACATTCCGACAGCCAATAAAATGAGAC
GCATGCTTGGGAGGTACCAACCACTAAACAACAAAATACCAACGTTTGGTAAACAATGTT
CATTTAGGTAGTCTTGTCCTTGTCAAATCCTTCTGCCATCAGAATAAATTGTCCTTGTTA
GCGGAACATCGGACATCGTAACTTCTGAGCCTTGTGGTGAATCTCAGCACCACATCCAAT
GCGCACACAGACAAAATTGTATGCCAACTTTACTTCCTAATCTTCTGCAGAAGGAAAATC
ACACCATTTTATTTTATTTGATCTGGTCAGAGGATTAACAACTTGTCATTCATCTCACGC
TCCTTTCAGGTGGTGCGTGTCCTTGATAGCTTAGCGGATATTGACCTAACGAACGGCGTC
CAGCCAGGGCAAAGCGAGCTCTTCAACGTGGCAAACACCGCAGATATCAGGATGTTCCAG
CAGATGGTGCAGGGCAACCAGGATGACAGTTCCGCGTTCAGCCAGTATAGTTGGATCAGT
CGTAGTAGGGCCGACGCCGAGGCCACCTCCTCAAATTCCCGGATCTTGTGATGATCATCA
GGACCATCACTAGTAGCAAGCTTCTCCTTTGTTTATGTGCTCCACGTGTACGTAGCCATT
CTTCTCGACCCACTGATTCGGCCGGGCTGTATCGATCACCGAAAAGTCTGGTGTAATTCT
TGCCTTATTATGATTGCTCATGTGTAGATCACACGAGAAGATGTAATTCTTGTTTGACAA
ATTAAGCTAGCTGTTGTTGTGGTTGTTAACCAACTTGTTAGGCTGCCTGCTCTTGCTGTT
GCCTAACTGAAATAGCACAAATGTTTGAACTTTTCTAGTCTTTCATTTTGTGCTGTTGGC
TTGACAATGATGTTGAGGCCACATCTAAGGGAGAAAAAGAAAAGGATACTGATGAAGTCT
GTTTGACTGACAATATAGTCTTGCTTTCTTCCAATATATTATCAGCACATGTATTGTATG
ATATGCACGGTCAAAATGACGTTGATGTTTCGCTAACTCTAAGATGATGATTCATTACAT
TGAAATCTGGGCAGAGGTTGCATTCTAAGACCAACAAACCCTTGAAATAATTCTTTATGA
CCTCTCAAGCTGAAATATTTTCCATGATGGTGATTTCAGATCAACATCAGCTGCTATGAT
GAAGTACCTTTACCTGTACCAGCAGCTAACATATAACTAACAAATGAAAAGGTTTTCAAA
AGGTACATAATTAACATGTGTTTTTTCACCCAGCTGCCATGATTGCAGGCAGATTTCCAA
ACTTCACAAAATTTTGATAACCAGCCGCAATTCACAAAATTACCTTCAAATTCACTCGCT
TTTATGTCACTCAGCAGTGACAGCCCAAGTTTGCACAGAAAATCTGAAGAAAAATACAGT
ATTAATCTTTTATGTCTATCGTGATCACAATAAAGTGCTGTCATCTTCAGATTCTGCCTG
AGCAGAAGGCAATCTGCATACACTATCTAATTATCTATGGGGAGGTTGGGGGAGTAAGAC
ATACAATCTAAGTGAAACCTACATCCATACATCACATGCTACAATCACTTATGCGCCGTA
CAATCCAGATTTAGTCCGTGAAGTATCGCATTCTTCGTTCCCAGCTGCCATCGACAGGAG
CTCCGCTGCGCAGCAAGCAGAGCGCCATCCTGTTGTTCAGATGATAATACTTGTAGCGCA
ATCACTAGGAGCGTGAGACCACAATCTTTCCGATGGCTGAGATTCAGAGTCAGAGGTATT
GATCCTTGATCGTCTTCACAAGCTCTTCAACCCTCTTTATAATTTTAGGGTTCATCAAGT
CCCTTGCCTGCCCAAGGAGAGTGCCTTCCCTGCTGCTGTAATACGCATCGATTATGGCGC
TTGCCCAAGTGTGCAACACCTCAGGACTCCTGCAATACACCGGGTTATGTCAAATCAGCT
TGGAGATTACACAAAAGAATCTTTTTTTCTGAAATGCAAACAATACTTACGTGAATAATG
TATCGACATTCTCGCCCTGAAGTTCAGGGCCAGGAGTAAAAGCGTCATTCAGCGCACTCA
GACGCTCTGCTGGATCCTCAATCATTATAAGATGCTTTAGTATTCTGATATCCTTTGGCA
TTTGCCTCTGGAGATTGGCTACAGCAGTCATGTATAGATGGAACATTATGTCTTTTGCCT
GCAGAATGTCGGTATATCCGCTTAAGCTGATGAAATTGTACAGAGAAACACAGATAGGAA
AGACACATAAAAGTAATGCATCCCTAGACCCTTACATCAGATTTTGTGATGTCGGTGCCC
TTTGCAGCTGACCAAGCCTTTGAAAGCATCAGCACCAACGCGGAGTCTAGTTCCTTCTTC
TCAGCCAAGTCATCGATCTTTCGGCATGCAGCGTCCACTGAAGGTGAATTGAGTATGTCC
TTTAGCTTTAGTTCCGCAACATTCAACGCTTGAAGACTGCCAGACATGTCATCATGAGCT
TGTAGAGCATCCACACAATCATTTCCAAGTGTTGCCAACTCTGCAAGCAAACCAATGAGG
TGAAACATGGTGAACAAGGGAAACAATGATCTGTAGTTAGGACCCAGCAAGGTAGCAAAC
GAGTGTCCTAACCGACAGTTTACGTTTCTCTGTTACTCCCTCCGTTCCTAAATATAAGTC
TTTTAGAGTTTTCATTAGGAGACCACATATGGATGTATATAGACATATTTTAGAGCGTAG
ATTCACTCATTTTGCTTCGTATGTATCGTATAACTTCNTAT