Contig Data
morexGenes
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Map Locations of contig_50716 (4372 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_50716

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65823 1 610 bp MLOC_65823.1 Available Available None
MLOC_65824 1 529 bp MLOC_65824.1 Available Available None





CDS Structure of MLOC_65823






CDS Structure of MLOC_65824






Contig Sequence (4372 bp)

>contig_50716 4372 assembly3_WGSMorex_rbca.fasta
CAATTCCATATACTCATCTTTTCTGTACATGTACTTGTAATGATGTCCATTCTTGCGAAA
CGACNNNNNNNNNNNNNNNNNNNNNNNAGGCCCTCGCGTCAAAATAAGGATAGAATCTCA
TCTTCGACGTTACAATGGCACACCAAGCATTGCAAAGTGCAAGGTCGTCCTTTTGGTTGT
AGTTATGGGTGTGGGTCCTCGAGGTCTTGATGCTTGCTTCGATCACCTCGACAACCTCCA
CCTCGGTCACCACCTCTTGGACCTCCTTCTCGGACGTCCAAAGTGAGACGGGTTTTACTC
GACCGTCGAAAGATAAAGTATATTTAAAATAATTACTGCGTTAACATTTTTAGGGGGTCG
TCCGCCATAAAGGAGTAATGCGATTTACTTTCTTAGAGCAACTTCAATGGTGCGACCCAT
TTCGTCCGCCGTCGTCCGTTTGGGTCCGTGCGGATAAAAGTGATGGCCAACGGCGGACCC
ATTTCCGAAACGCGTCCGCTTTACGTCTGCGCCGACCCATTTCTGGCTCAAATTTGGGAC
TGAAATGCGTCGGCACGGACACGAAGCGGACGCGCGCGCCCTCTCTGTGTATGCATGTGG
CCGGCCTGGCCGACTTGTCACATAGCCACCCACCCACCTGTGCGTGCTTACTTAATTCGC
TGACCCACCCCATTGTCACAAAGATGTTGTTCACTTGCTTTTCGTTGGATACATGTGCTG
ACCCATTTAAAGAAACAGACACGGACATGCCGGTGGACGACCCAAACGAACAAAAAGAGA
CAAAACCGTCATCCGTTTGGATCGACCCGTTAAAGTTGCGCTTATGGCTCTATTGAGGAT
CGGTTAGAAATGCCTCAAAGGTAAGGTCCTATACAAGTCTCCCATTGCCAATCAGTGCAC
CTTTTTTTTTTCTAACTTACCAAAGCTCTCTCTTAATAATTCATGTATTTGCGCGGCGAC
ATCGACCCTAAAAAAATTCATGTATTTGCATGACACCGATGGAGCAGCCAAAAGAAATTT
TGTTTTTCCACGCCGGATGACAAATGCAGCCAAAAATATACTATATCGAAAGCCGCAAGC
CTGAATTTTGCCTACTACTCCCTCCGTTGCAAAATATAAGATCTTTTAGATATTTCATTA
AAAGACTACATACAAAATAAAATGAGCGAATGTACACTCTAAAATATGTCTANNNNCATC
CGTATGTAGTTTATAGTGCAATGTTTAAAATGTCTTATATTTAGAAACGGAGGGAGGGAG
GTCATATTCAAAAGGAAATATACTGCATCTTCCAATCAAGCAACCTGCTCTGCGCAAATC
CCGGCTCGTCGTTTGGACGAACCAACAAAACGCTGAGGTGGATCAGCTCGTACTCGTACA
AGTATACTCCATTAAAAATCGCATGTGGCCGCGGTCCGACATGGAGGCACATCACACGTC
ATTCACAGGTGGAAGTGGAACGCCGCGTCCGCACACCGCCGTTTCCATCACGGGCACTGT
GACGCGGGCCCCTCCTCCACCGCCCCTAGCCGTGGCGCCACCTCACCATCGCTTCCGGGT
CATGGGCTCCAATCATCCCACCCCCCGCTCCCTGCGCCCACCAACTCCGTGGCTCCCTAT
GCGGCGCCTCACCCGTCACCTTTGTGAAAGCTCGGCGTTATGTAGCCGCAGCCACACCCC
ACCGCTGGCTGGCCAACACGAAAGTCTGGATCGAACCGGCGTGCGCGATGGCGACCACAC
ATGGCATGGCATGGCATGGCATGGCACGGCCGCCGAAAGCGAGCAGCGCAGCTGGCCGGC
CGGTGCCACGGGAGATCACGGCGGTGGAGGGACACGCAGGCGGGGCCGGGGCTGACAGCC
GGCCATGTCGACTGCTCTACTCTAGTATATCTCTTCTGCGTGATGTGGCACCAATCAGCC
CAGCGGACCGTCCTACCGGGCACTGGCCGTGGCCGGCGCATGTTGGACGCCCGGTGCGGA
CTCTGCTTGCTCGTCGCTTTCCATGCCATCTGATGATCTGAATGGCCGGTTTAAAGCGAC
GACAACGACGGCGGCGAGAATTTTCTCGAAAAGAAAGCTGCCCAACCCCATCGCCTCCAC
TCCACCGGGGCCAAAAATCATCTGCAAGCAATTAGTTTAGAGGAGGAAAGAAGATTACAT
GGGCAACCAAGGGGTTTCACTCATTTTGTAAGAGCTCAGCTACCTTGCTGCGCATGTCCG
TCTCTCGACCTTTCGGCGGCGGTGACCGGCGAGGGAAGAGATCAGGTGGCGACGATTAAT
TAGTGGCGTGCTACTTCGTGTTAGTGTAATCTCGCTGTCCCGCTGATGATATCCCCGTTG
CTTTTCTGATAAGTTTCTTGTTTTGGAGCGTGAGGTTGATCCATGGACAACTACCCCTGC
GGCGCGGTAGTAATCGTCTTGCATATATCTACGCTAGCTTTCGGGCAAAGGTGGTGGAGG
CCGGAGCAAGTAGACGAGCCCCAGAGCCAAAGGTGATGGGGGACATCCATCCAGTTGCTG
TCATAATTGTTGTTGCTGATCGACTCTGAAGCATGACACATGCAGGCTACCACTGTAGCG
CTAGAACAGGGACACGATTCCAGCGGTGATTGCTTGGGGATCTGGAATTGCTCTCACAAA
AAACCTTGGTCCATTCGACACCACCACCTTATTTTTTTTTCTATAATAAAAGAAACTTTT
ACCCCTGGATTACCTAGCACATCATACATACTGTGTATGACAATATATATATATATATAT
AATCGTTTTGCAAAATGAGTGAATGCCGCCCTCCCCCTCTCCATCAGCAAACATATGCGT
AACCAGGACCTTAATTAGGTTTCACCGATCCACATCACGTCACATCTCGAAAAGAAAAAG
GAAAAAGAAAAAGAACATACGTACTGCTGGAAAAGAAAGTCTATACGGTAGCATAGGCCG
GGTGGCCACGTACTACCCTGAGACGGAGAGCTAACCTAAATCCCAAAACCAAATCGCGAC
TATTCAGGCGCGCACATTCATCGGTTCCAACTCCATTGTCTCCACGCCAACCCGGACGAC
AGCCGCCCCTGCTCAGCTATCGTAATCTCGTACGTACAAAACAAAGGCTAATCAAATACG
TTTCGATCCAAATCACAGATGATGGAATCGATTACTGCTACGGCTAAATCGGCGAGGGCT
TCATTTATATTTAATTAATCGGTAAGGGATCGACGGTCCGATGGAAAGGACGGCGCAGAA
CGTGCAAGGAGGACGAGATGTGTTGTTGTGTACACCTCAAAAGGTCCCACTTGCATGTTG
CCACTGCCACCAGGGCCGGATCAGGTTTGGCCAGCACACGGCACACACATCAACGTGACA
GCAGGGCCGATCGTACACGGAAACTTATGGAAAATGGAAAATAAGTTCAAGAATCTCGCA
ACTTTTCTCTCGAACATATATTTGTGTGTGTGTGGCACGACCGATCCTGATCGAGCAACA
TGTGGAGCGAGATGAACTAGACGCGGGCCGTGCACGGGCACCCTGGTATGTTCTTTGGAC
CCTTTACACAGTGTCATGACTCACGGGCCACCTTTTACTTCGATGGCATGACGCGCACGT
ACAACCGCACGTCGTCAGGACGTGCTTATTTGCACATACAGCTCCCCAGATTCCCGATCA
TCATGAGACGGACTCGGCTTGTTTATTTCCTCGACCCGTCGATCGGCTTCGTTTTTAAAT
TTTTTTGGCCTTCGATTTGCGTTTGTGTTCTCCCCGTTTTGGCCTCCGGAGGCCGCTATA
TATAGCCTCCATTGCTCCACACAGACACACACGCCTCACACTCTCTCATCGGATCAGCCA
CAGGCACACAACAGGGTCACAGTAGCACTAGCTTCAGCTAGCTCCGGGCATTTTCTTGCT
TCCACCACGGCAATGGCCACCGCTGATGTACGTATAGCTAGCTTGCCTCGATCGGATCGA
TCGATCGTCTGTTCTCTTTCATGTTCTCGGATCGATGGTCGTTCCGATGGATCTACGCGA
TCTGACGAACGCCCATGATCGTGGTCGAGCTCGAGCTTGATCGGTTTGTGTACGTGCTGG
CATGTGCGTGGGGCTGATGGCATTGAGTGTGCAAACGTGCAGGTCCAGAACCCGACGGCC
GCGCTGACGGAGGAGGCGCCGGCGGTGGAGACGCCCGTGGCCGCCGAGGAGGCCGCGAAG
ACGGAGGAGGTCCCCGCGCCGGCGGAGGCCGAGGTCGAGGCGCCTGCCCCCGTCGAGGTC
GAGGCGGCCAAGGAGGAGGCGCCGGCCGCCGCCGTGACGGAGGAGGCCAAGGGGCCCGCG
CACGCAGCTGCCGCCGAGGCGGGGGCCGAGGCCGTCACCTCTTCCGTGAGCA