morexGenes - Barley RNA-seq Database

Contig contig_50674
Source Contig contig_50674
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_50674 (8376 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_50674

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_65797	1	613 bp	MLOC_65797.1	Available	Available	None
MLOC_65795	1	663 bp	None	Available	Available	None
MLOC_65796	2	888 bp	MLOC_65796.1	Available	Available	None
CDS Structure of MLOC_65797

CDS Structure of MLOC_65795

CDS Structure of MLOC_65796

Contig Sequence (8376 bp)

>contig_50674 8376 assembly3_WGSMorex_rbca.fasta
CCTTCAACCAGCGAAAGTGAGACGATCATTCTCTCCCTCCTTGAGCCACTCCACGGTCCT
TCAACCAGCGAAAGTGAGATGATCATGATAAATCTCTAGCATGCGTGGAATCTGAGGGGC
AATAGAGACTATCGTAAAAACCCCGGAGTGGTTGCCAAATCCAGGATTGAGATCGAGAGC
ATGGGGAATTGAGGAGAGAATTTCATTGTGTCTATGAGCCAGTAATGCCAGACTTGGCAA
CAGGTGTTGTGAGTGTATTCAGCAGGCTGGATGGTTGTTCGATGGGAGAGACGGAGAGCG
CTAGGATTGGAGATAGAGACTCTTACGTGAGCACTATGTTTTTGTCAAATTATTTTTATT
CCTTAAGAGTCTACACATGCGCCTATGAATTGGATATGCCCTAAGCATGGGGAAATGATT
CAGTCACCCAAGTAATTAATCGACAGGATCAGCAGAGGGCTAATCGCTCCATCATTTTGC
CTCTTAATCCATTCGAGAGCTCACATAAATGAAAGGATGGAGCTTAGGAAAGATGGTGCC
CATGAATGTGGGAACACCACACCTGTGGTGCCCATGAATGTGGGATCATCACACCTATGA
TGGCGGGTCATTGGTGGAGTTATTTACCCAAAACCACCACACATGGGGCTAGGGTAACCG
GTCACTACCAAATCTGAACCGGGTCACAAAGAACCAGTGTTTCTCGGCCTGAGTAACACG
GAGCACTAACAACCCGATTTGACGTCGAAAACAGCCAAACCGACAGGTGCGGCCGACCTG
TCGTGTCGAGGTGGCGCGGGCTGACACGCATCGTCTAACGGCGGCAAACGACCGTTTCTT
CCCCGTGTATGAGTGCCCCGCGCGGGTCGCTCGTCGGACCAGACCACAACAGAACGCCCT
CTCTCTCTCCACTACGACGCCCGCCGTCGTCGCCATCGTTGACTCGCCGTTGTCCGCCGC
TCAACCATGGTTTCTTGGAGCGAGGGGTCAAGTTGTTCTTCGGATGACGAGTCAGCGACT
AGCCAGGTAAGTTCATTTGGGGATTTAGCATTTAGTGTTAGATTTAGGGTTCTTCATTTG
GGTATTTCCTAACAGCTCGGTTATTTGTTCAACTTTTAGCTTCCTAGGACTATTCTATGC
TATGAATGGAGTGCCATTGCTCATGAACTCTCTCCTTGTTGTCTAGATCTAGAGCCTTGC
CTCGGGCTAGTTGCATTTCAATCTATGGACACTAGTCGGTGTTTTCTTACTTGTGCAAAG
GAGAAGGTATGTTGCTTAGTATTGTGCAAAAATTTTACTGCCAGTACAAAATTATGCTCT
ATTAAATTATTTGGTGCAAATAATATTGTTGATGTTATAATCAGTAACAACATATATTTA
TTGCTGATTTTTTGGATTTTAGGCAGACCAAAAGTGCAGCTATCTAGAGTGGATAGACCG
TGAGTGGTCAATGGCTATGCAGTTCTGCATAGCAGAATTGTGGAGCATGTATGACAAAGA
AAACGAGGACAGACTCAGAGACAATGTTAAGCTTGGTGAAGAAAATTTCAGAGTAATTGG
AGAAAAGAGGAAGATGGAGGAACAACTTAGAATTTTCAAACTTGATTTTACAAAAATAGT
GGCTGACAAGAAGGAGGCTATTAGTCAGTTGGGCAATGCTAGGTTGGCTCTTAGTGATGT
GAAAGAGGAGATTGAGAAGAAACAGTTGGCAGACCATGGTTGCACCAATCTACATGAGGT
ATTTAGGACAAAGCCAGAGAAGGAGAAGGACCAACTTGTGGTAGAGAGAGACCAATTGAA
GCAAGAGAAGAAAAAGGCGGAGTACATCATTTCTGATTTGATGAAACAAAAGCATGGCTA
TAAGGAGAAGATCAAGAAGTTGAAGGAGATTTGTGATGAATTTTTATTATGTAATAAGAA
CTTATGGCAATATACTGTTGTAATGGTTGAATTTGTACTGAATTATCCAGTTTATCTCCA
AGACTAGAATTTGAACTTATGGCATGAATTTGAACTAAATTTGAACTGAATTTGCACCAC
TGAATTTGCAGTACTGAATTTGGACTGAATTTCTAATTTGAACTTATGGCATGAATTTTT
TCAATATCATAAATGTCATGGATAAAGTGCACATGCACTTGGATACATAGTCAAATAGGT
TCAACATAGGAGTACTTAAGTTCAATATCATAAATGGCATACATAAAGTGCACATGCACT
TGGATACATAGTCAAATAGGTTCAACATAGCACTACTTAAGTTCAGTATCATAAATGGCA
TACATAAAGTGCGCATGCACTTGGATACATAGTAAAATATAAACTCTCACTAGTTCCTAG
TGGCATATAAGTACCCCTCCATCCTTGAGCTCATGTATCTTGTCCTCTTTGGACTACTTG
AATCTTCTCCAGTACTTTTTGGAGGATTGAAGTTTCTTGCACCTCTTCTTGCACCAACAC
TAGATGTACCAGAAGAAGAACCCCTAGCACCAGCAGCAGATGAACCCCTTGAAGCAGCAC
GAGATGAACCCCTTGAAGCAGATGTAGAGCTTGCACCCCTAGATCCAGTAGCACATGTTG
AACTACCACCTTGCTACCATGCAGTGGTTGTTCTGTTTTCCTACAATTATTCTTACTAAT
AAGTGATAATTAATGAATGATGAGACAAAGAAGGAAGTCAGAAAGAACATACCATGTGTT
TGTTCCTCCTAATTTGCAGATGAGACCTCAATGGCTTTCCACAACTTGTGTATTTGTGGC
CCTGCAACTTGCACTTACTACAAGTTATAGTAGCCATCCTTGATGTGTGCTTGGCTTGAG
GAGGCTCAAACCTTTCTTTCTTCCTTTTCTCTTATGCTGATCCTTTCTTGTCTTCTTTGA
ACTGAGGTGGGTCAATGTCAGGAGTTGCGGTTTTCACCCAACAATCTGGACCAGGAACTG
GGTAAATTATAGGCTTGTATGACTCCAAGTACATAGCCTTTTTGAAGAACTCATTTACAT
GGTCCTCTGGTCCAGCTAACAATGATTTGCAGTCCCTTGCATATTTCTTGTTCATCTCTA
ACTTTTCAGCATAGGTTGGTGCAATTTCGCATCTTGCAACTTGTCCAACCTCTCTCTTTT
GCTGATACCTTACCAGAAATTTGTCTTTGATCCCATTGATCATAGTGACAAACTGGCTTG
TTCCTCACATAAAGTATGTAGTTATTAAGAACTTCACATAAATTATTGATCACCGGATCA
GTTTTGCAGTTAGTATCCATTGCATGTCTTGACCAAGCTTTAGGAAGAATTCTTGACATC
CACTCCCAAACAGCATTGCACTCAGCCTTCATGCTCTCCATTGCCAACTGAAAGTCATGT
TCACTGTAAACATATGGAGCTACATCCATGCATTTTTCAAGTCTTCTCTGAATCCTGCTC
TCTGAAAATTGGCATAAATGTGCCTCAAGCAGTACCTATGAGGGCAGCTTGGAAAGGCCG
CAGTCACTCCATTTAGTAGACCCTTTTGTCTATCAGACATGAATGTGTACTTCTCATATT
TTCCCTCTTCAATCCCTCCTAGGGCATACTTCAATTGAGTCAAAAACCAGGACCAATTTG
GTGTGTCTTCAACTCCAACCATTCCAAATGCTATGAGGTACATATTGTTGTTTGCATCCC
TTCCAGTAGCACCTATCCCTTCCAGTAGCACCTAGTATCTGTGCTCCACTAGTCAACTTA
ATAAAACAACCATCTAGGCCTATGAATGGCCTGCATCCATTCAAAAATCCTTCAACACAT
ACATTCAAACAGAAAAAAAAGACCATGAAACCTTTGTCCTGCAATTGGATTTTCTTTGGT
TTTTCACTCACAGTAGTGCCAATGCATCTAGAACAGACCTTAGTCCTACAGCACACCTAG
AACTAACCCACATTATCCTAACTAGGTAGTATTGCTACATCTAATCCTAGGCAGCACAGC
TAGAACTAACTAACATTATCCTAATTAAATAAATACAATAAACTAGGCATAGAGATTACC
TGGTGGAGATGGAACAAAGGGGGATACTTCCTTCCCCAACAAATGAGTGGGCGCCGCAGC
CTTCTCTGCCTCCTTCGCGGCACACTTGTCTGCCTCCTCCGCATACGAGGACGGCAGCGG
CAGGACACCTTTTTTCCGCGCCGATGAGTCTGAATCCACGTCGCAGAGGCCATCGGGGTT
GGGCACAAGTCGCCAACAGGGTCCCATTGCGGACGACAACCACCGAAAGAACGGTCATCG
ACGCAATCAAGACTTTCTCCGACATCGTCGCCGTCGAAGCTGGTCGCCATTAGTCGTGTG
AGGAAACTGAATCGGGACCGGAGGAAACAGCGATTGGGTGACCTAAGACATGGGGAAGGA
ACGGCCGTCTGCCGCCTTCTAACAAGGCGCACCAGCCGACGCCATGTCGACCCTGCCTGT
CGGTTTGGCTATTTTCGACGCCAAATCGGCCCGTCAGTGCTCTGCATTACTCATTAGGCT
CATTAGGCTCAAAAATGATGGTTCTTTGTGACCTGACTCAAATCTGGTACTGAGCAGTTA
CCCTAACCCAACTGTGATTGTTTTGAGCAGTTACCCTAACCCAAGTGTGATTGTTTTGGG
CAAATAACCAGTTACCTTACCCCAAAGCCGTGTTTGGGTTCTCGTTTGTCGCCTAAATAC
ACTTGTCAAATATATACAAATCTCCGTGATTGTTTTGATTTTCAAACCAAGCGCGGCACA
AGTGTGGTGGTTTTGGGCAAATAACTCTCATTGATGAGCCCAAGCCCGGTGACATGGAAG
TTAAGGGTTTGAGAAATTTATAGGAATTCTGAAGGATAGGAACTTTGTAGGAAAAATTAC
TATGGGGCCTTTGGTTTGTGTGAATGGATTTCTATTCCTAAAATGCTATGTACTCCATCC
GTTCCTATAGGAAATGAGATGCATGCCTATCTCACTTCCAACAACTGTCCTATTCCTATA
ATATTCGTATCCTATGAACCAAATGAGGTTCAAAGCTATTAGCAGGGTTGTGATTTCATT
TGCATCATAGAAATGTTGCTATAGAAATATTGCATGCTCAAGAATTTTTTTGTTAAAATA
TTATCTTCTACTCCCTCCGTTCCTACGTACAAGTCTTCTAAACATATAAGTCTTCTAAAC
GATTTCACTAGGGATCTACATACGAAGCAAAATGATTAAATGTATATTTTAAAGTATGTC
TATATACATTTACAGAATGATTGAATGTTATATTCTAAAGTATGTCTATATACATCCGCA
AAATGATTGAATATAGGACTGGACTAGGCAGCGGCGCCGTACGAAAGCCTTGCCGTGCGG
CGGCTCCTACAGACTAAGCACGACCTGCCACATGCAAGATTCCCTTTGATGTTTGAAATT
TAAAAANNNNNNNNNNNNNNNNNNTTAATTCAATCGATGATCCGTTTTCTCCATTGACTT
TCTCGCGACGAGTTCTTCGAAACTAGATCCCATATCGACATGTTCCGTCAACTATTTTTT
TTCATTCATACTTGCCACATTTTTTGACTCACTTGCCATATTATTAACCACTTACTTGTC
TAAAAAATAACGTGATTGTCACTTTTTAATATTGTTTTGTACAAAGTCTTGTAGTAGTTT
TCATCATACATGATATAAAAAGCATGTAGTAGGTTGTGTTTGTCAAATTAAATATGTCAA
CTTGTCATATTTACATACAAATTTGCCAAAAAACTATTTTGTGTGCTTCTTAGTTTAACT
GTGCCAAGTTGTCATATTTACAAACGATGACCAAAAAAGATTTCTTGTGATCATCGTTTT
TAAATAATATTGAGTTGTCATATTTTTGCGTGTGATCGACTAAAAAAAATTGTTTGTGTT
TGCCAGTTTGATTATGTCGAGATGTCATATTTATACAGAATTTTAAAAAAAATATGACAA
TTAAGTTATTTTTATCACACAAGTAAGTACTTACTAATATGACAAGTGCAACAAATGTGG
TAAGTACGAGCAAAAAAAAAGTTGTCGAAACATGTCGACATGAGATCTCGTCATGATAAA
ATCAGTGATGAAAACGGATCGTTGATTGAAAGATAAATCTTTTTAAAAATACAACGTTGC
TAAGCAAGCTCTTCGGACTTACGCACATCAGCCGCTGCATGGGAAAACAACCGTGCGTTG
TGTGCAGTTCAGATTTTTCCTTGAATATATATTCTAAAGTATGTCTATATACATCCGTAC
ATAGTCTATTAGTGTAACCTCTAAAAAAGGTATATATAGGAACGGAGGGAGTAAAATGCT
AATCCTAAACAAAAGAAGATGCAGGTGGCATCTCTTCTAGCAAACCAATCTGTCCAAAAC
ATGATAATACACGCAACAGTAGAGCATCCAGACAGTAATGCTTATACAAGCAAAACGAAG
ACATAAACCAACGCAAGAAATACTCGATGGCCAAATATTAGCAGCAAATAAAGCTCCAAA
ACAGTGTTCATACGGTTCCATAGATTGGTCATGATAGCAAAACTCCTGATACAACTAAAA
GCAACGATAACAGGCCTACTAAAGTGCAGGTTTCTGGAATAAGCGAGTTGACAGATGGGA
TGAATGGTGCCATCGTGCCAAGAAAGTATATCCGCAGTCAGCCGCAGCCAAAGACAAACA
TAGCTAGCTACAGCACACCATCACCACCACCTCAATCAGCTTACTTAGATCGCTGCCTCA
TCTTTCGGCGCTTCCTTTTCAGCCTCCTCATGCGCTTCTTCTTCCACTGAATCAAGATAT
GAACAAGTTAAAAAGGATCGTCTTAACATAATTATCCAATACAGAAACAGCACACATCTA
TGAGCAATTTACGCTGCCAGCAAACTACTGTACGGATACAAGAATAGACAGTTGCCTTAC
AGGCATGCTGTTTGCAAAAAACAACGCAAGTATTCCCATGAACCACAAATGTAAACAGCA
TAAAGTTGGAAGCAACCCCAAGCAAGGCAACAAATCAAATCAGTTGCCCCGTCCGAGACA
GGTTGGGAACAGTATAATTGAAATGTGCAAAAGACTTGACTGACAAACTGTCTCTGCTGC
ATCATGACAGTTCGACATAATTAATAGCAAGCAGACAAGCACATTCTCTACAGCATACAA
AATTTAATGAGAGTCTACACAGCACACCTTAAACATATGGTACTACAACCAGATGTGCCA
ATTCATCTTATTACTTGAATCATGATAACCAAAAAAGAAATTCGCAGGTTTGAACCAAGA
TGACGAGCACAAAGGACCAACCTCCAGAGTACATAATAGAAAGCCAGAGTAAACTTCATC
AAATTGTTAATTCAGCATCTCGAAGGCTCATATCAAGTGTATTCGTTAAAGAAACCTTCA
CCGTGGCAGGGAAACCGAAACGTGCCGAACGACCCACGGCGCGCGCGCGAGAACGACGAG
CAACGCAAGCACGGGACGGGAGCAACGGAACACGAGATACCAAGCCCACACGACACATGG
ATCGATCTAAGGTCACACGAGACAGACCATGTCAAGCCATTGCCACTGCCACCACCGACG
CCGCCGCAAGCGTCGTCGGATGGCACCTCGCGTTCCATCCCGGACCGGCAAGAGTTGCTC
GCCCCGTCGCAGCCGCAGCAGCAACGGGGGGCACAGGCGCGAAACGGCGAGATCTGCGGC
TCGCTAGGGTTTCCCTGGAATCCGAGCCACTCGAGCCTCTCTCTTTGTAATCATAGCCCC
AGCTCGACAAAGAAAGGGCGCACGAACGAAGGAACGAAACTATCGCGGGGCCGAACAGGA
TATGTGGCCCGGGATTAGAGCGCCGGTGGGGATTGGGAGGTTACCTTGGCCCTCATGGTC
GGTCGACCCCTCGCGAGATCTCCTTCTCGCGCCTGCGGCTTCTCCTCCTCCTGGGGCGGG
GGCGGGGGCGGCGGCGGCGGTCTTGTGGTGGGGAGTGGAGGAAGTGGGAGAAGAAGAGGC
GCACTGGGGGGTTACAAGAAGCGAAACCCTAGGAAGGCAGCTTCGAGAATATGGGCCTGG
GCTGCTCAATAAGCAATGGGCGTATTGGGCTGAATGCGTTCGAGGTAACTGTGTTTTCCC
CGCAAACAGGAAAATTTTATTCGTTCTAAGGCCCTGTTTGAAACCATAATAGATTATGAT
AATCTGAATCATGAACATAGATTATATAATCTGGTTTATAAAAATAATTCAGGTGGACAT
GTTTGGAGGTCAGATTATATAAACTGTAAACCAGTTTTTAAATTGTAAAATGACATGTTT
ATCCTCTGTTTACAAGGAAAAATAGGAAAGTGGCGGTGGCACTGCGTAATTCTCTTGAAG
TTTACAAGGGTAACACGTCATTTGTAATCCATAATC