morexGenes - Barley RNA-seq Database

Contig contig_50665
Source Contig contig_50665
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_50665 (8878 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_50665

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_65790	1	1762 bp	MLOC_65790.1	Available	Available	LOC_Os04g37460.1, FRAME:+3, EVALUE:0.0, 13104.m03577 protein glutamate decarboxylase, putative, expressed
CDS Structure of MLOC_65790

Contig Sequence (8878 bp)

>contig_50665 8878 assembly3_WGSMorex_rbca.fasta
GGACTCATCTTCTTCTCTATGTTGATGACATGATCATCACTCGTGATGACCCCGAGTATA
TTTCCTTTGTAAAGGACCGTCTTAGTGAGCAGTTTCTTATGTCCGATCTTGGACCTCTTC
GCTACTTTCTTGGGATTGAAGTCTCTTCTACCTCTGATTCCTTTTTTATATCCCAGGAAA
AGTATATACATGATCTTCTTGCTTGTGCTACTCTTACTGATGAGCTCATTGTTGATACTC
CCATGGAGCTCAATGTTCACCTCTGTGATACTGATGGTGACCCCTTGCCTGATCCGACGC
GTTATCATCATCTTGTTGAGAGTCTTGTCTATCTCGCTGTCACTCGTCCGGATATATCTT
ATCCGGTTCATATTCTGAGTCAGTTTGTCTTCGCTCCCACTTCGGTTCACTATAGTCACC
TCCTTCGTGTTCTTCGATATATTCGAGGCACAATCTCTCACCGTCTACTCTTTCCTCGCT
CCAGTTCTTTACACCTTCATGCCTATTCGGATGCTATGTGGGCTAGTGATCCCTCAGATC
GTCGTTCACTTCTGCTTACTGTGTTTTCTTGGTGGTTCTCTCTTTGCCTGGAAGACAAAG
AAACAGATTGCAGTTTCCCGTTCGAGTGCAGAGGTTGAGTTACGAGCTATGGCTCTTTTG
ACGGCAGAGGTGACTTGGTCACTGTGGTTACTTCAGGATTTTTGATAATCTGTCACTACA
CCTACTCTGCTATTATTTGACAGTACATGTGCTATTAGCATTGCGCGCGATCGTGTGAAG
TATGATCTCACCAAGCATATTGGTGTTGATGCTTTTTACGTGCGCGCTGGTGTGCAGGAT
CAGGTTACTTCTCTTCACTACGTGCCTTCCAAGTTATAGTTGGCAGATTTTCCGACGAAG
GCCCAGACAGGAGCGCAACATGGCTTTTGTCTCTTCAAACTCAGCGTTGTTACATCATCA
GTTTGAGGAGGGGGGTATTAGAGTAATTTATATATAGCCATATAACCTTTCGTATTTACC
CTTTTGCATAAGGGAAATACTTACCTTCAGCCGGCATATCACACACGAGCGATCTGCCGC
CTCCTCTATACGACGAGTGTACGTGTACTTTACACCTATCTTTCCGCAACATCACGTGTG
CTACAAATTTACCCTTTGCAACAACAGCTATGTTGCAAAAAAAGAAAACAAACAAAAACT
GCAAATATTTTTTTGCAACATTGTCTGTCTTTTTTTTCGAAACAACGCTCATGTTGCAAA
AAATATCGCAACTCAGCCTTTGTTGCAAAAAAATTCTGCAACACAACCTTTGTTGCATAA
AAAATCTGTAACAAAACCTTTGTTACAAAAGTTTCTGCAACAAGGTCTGTGTTGCAAAGT
AATAAAATGTACACCCTGTTGAATTCGACGGCTCGCAAGGCGGCCGATCTTTTAAAAAGA
TCCGCCGACCGACGCGTAGCAGTCCCCTTTGCATAAGGGGTTTCCTGCATATTATACACG
TGTACATGTATATATACCGGCATATGGTCTCCTAGAAATACAAGTTTCATATATTTTCTA
ACAGTGTTTATCGAAGATGACAATTTTAGTTCACAAGCATAACAAATTTGCCTCGGTTTA
ATTTTTGTCAAAAAATTATCGTACTCATAAACTAAACTTGTCATAAAAAGTGTTTAATTT
GCCATGCTAAAAGATCTTATGTCAGTTTTTTAGCATTGTCTTTTTTTGTGGGGTGCTCCC
GTAGATACTGTTGTGCATAGATGAAGTATAAGTTCTGATTGCTACTACTTTGCGCTGTGA
GATTAGGATAAAAGAGACAAGAAGAGAGAAAGTTAGCGAATGAGATGAATTTTCTGCTTT
GTGTACTATTACTCCAGGTATGTGTGTTGCTGCTGCTTCAACGCTTCACTGTTGGGTCAA
CTATTTAGTATTTTAACTATTTGAATTATGAATTATGGGTTGCACCTAGAACAATAAAGT
TCTACCCACTAAGTGATAACCCATCGATTTCATAAGCAACTCTTCCTTCATGCATAGCTC
TAGAAAGAAAACGATACAACAAAGCCCACGAAACACTTTAGTATTATCACTATCGGTACT
AGATTTGTCTTCTATTTGTTTCTTGTGCTTATATTTTAGATAAGTTGGATGCACCAGAAG
TTAGGGAAGTACACCAAATGCTGTCTTCTTGACAGATTTATTGATGTGTTATTTTTTAAT
TTGTTGCATCGGTGTTGAAGCTCTCGTCGTCAAGATGACAACATGAGGCAAGGTGAGAGA
AGAATCTTCAGCGGCGACTGTTGTTTTTTATCCTCAAACCCTAACTCTGTGACCGTATAG
CACTTAGAAGCGTTGTTCAACCCATAAAATATAAAGAACGAGAGTGTACTCAAGCTAACC
GAGGCAGCATTGCACCATATGAGGTCAACCCACACCAGCTCAGTGGGAACATACATAACT
AAGCACACACAAAAAATGTTAAGCTTAAAACAAACACTTACTCGAAGAGACTAGTAAAAA
AGAAATGAGCCAACATATGCCGATCGAAGAAGAACTCGGTATGTCCAAGAATTATTCCTT
CACGTAAGCTCAAAAACCGCAATCAGCAAACCAGACTGCTCTTCTTCCTCGCAACGAAGC
TCCGCCAGTAGGTGGTCACCTCCTTCTCGATTTCGTGCGCAGTCTTTTTCGCATGCTCAT
GATGCCCATGCTTCTTGGCATGCGCGTCCATCTCAACCATGACCTTGTTGAGGTCTGTGA
TGAGGCGCTCGGCGAGGCCGCGGCTGAAGTCCTCGCGGATGACCACACGCATGACGGCGA
TGTGCTCAGCGTCGGCGGGCATGGTGTATGCTGGAACGATCCAGCCGAAGCGGCGCAGGC
TCTCGACCACGTCGAACACCGTGTACCGGGATGAGTCCTTGAGGGAGAAGGCCACCAGCG
GCACGCCCGAGTCCTTGGACACCAGGTCAAAGTAGCCCATCTTCTCGACTCCCTCCCGGA
GCACCGTCGCGTTGTCCCGGCAATTCTGCATGATGTCCTTGTAGCCCTGCATTGCATTTT
TGCATCACATAATTAAGTAGTTTTTCAAACATATATTGGTCCATTGAGTGCCACCTAAAG
CTTTTATTTCTAAATAAATAGAAATGGTGTGTTAGCTATGTCAAAGAACATGCCGATGGC
ATGGCAAAGAAGAAGCAGAATCCTAACGAAACTAGACATCCACCTGAAATGCATGAAGTG
CATGGACCGCTGGTATTTCTTTGCTTGCAGATGCAAAGTTACAACACATGTTTTTCGTGT
TGCTTGCCGAAATAAGAAACAAGCATAAAGCACAAGGCAAAGGATACCCGTCAGAGTAGA
ATGTGCAGAGATGTTCATCAGTGATTTGCAACAGTACTGCAACACTTGGGACATACGTAC
TGCGACACTTGTGACATAAAACCCCGACAGAAACGCACTTAGTACTGTAGAAAAATTATG
GTTAATTACCTCGAATCCGAGACGGATGAGTTGATAATACTGCGCAATGATCTGGCTCGA
ACCTATCCGACAGAGAAGCACATGAACATACTTCAAAACTTATACTGGAACTAACCAAAC
GATTGATGGAGGCGAACGGTGTTGTACCTTTGGAGAAGTTGAGCGTGAAGGTTGGCTGGT
CGGCGCCGAGGTAGTTGATGTGGAAGATGAGCTCGTCGGGCAGGTCCTCCTTGTTCCTCC
AAATCACCCACCCGACGCCGGCATAGACGAGGCCGTACTTGTGGCCGCTGACGTTGATGC
TCTTCACCAGCGGCAGCCGGAAGTCCCACTCCAGCTCCGGGTAGATGAAGGGCGCGATGA
ACCCGCCGCTCGCCGCGTCCACGTGAATCGGCGTGTCCCACCTGATCGATCCACGAAACC
AACCGATTGATCCATCATATCTCTATCATTCATATCTGCAGTTTATTACGCACGCGTCCC
GTCCGGTTCCAGTTTTTGGCATGGTAAATTCGTACCCTGTCTCTGCATTCTTGGCAACGA
GGAGGTCGTTGAGCATCTTGACATCCTCGAACTCGCCGTTGAGCGTGGAGCCGAGGATGG
CGGCGACGCAGATGGTGTTCTCGTCGACCAACTCTACGGCCTTCTCGGGGTCCATGACGT
AGTACCCTTCCTTCAGCTTCACCTCCTTGAGCTCTACCTCGAAGTAGCGCGCGAATTTCT
CCCAGCACACCTGCAAAAGCAAGACATCGATAAATCGATCGACCGGCCAGTGATTGAATT
TGAATCCGGCCGGTGACGATGGAGCCGGCATGAAATGCAAGTGTCTCGGAAATGTGTCTA
CTCTACTCGATTAGTAAGGAATTACCTGGACATTGGCGCCGGTGACGATGTTGGGCTTGT
CGAAGGGCTTGCCCTCGGCCTTCATCTTGTTCTGCCACTTCCTCTTGAACGCCAGCCCGG
CCAGCATGATGGCCTCCGAGGAGCCGATGGTACCGACGCCGACCGCCGTCTCTTCGTCGC
CGATGGGCGCGTTGAAGAGATGCGCGATCATGTTGACGCATCGGTTCTGTTTCAAATCCA
CAGACGTAAGTCGTCATATAGGTGCGTAAAAGAAGAATCGGTCGTCCCAAGCGGGCTGCA
GCAGGATGGACGCATATCGAAGACGGATCGACGAGCGAAATGATACATGGATAGATACCT
GGAGCTCGGTGGTGACGGGGTACTCGTCCATGTCGACGTAGTTCTTGTTGATGGAATCCT
GGATGAGCTTGTTGCACTCGGGCTCCATCCAGGTGGTGACGAAGGAGGCCAGGTTGAGGC
GCGGGTTCCCGTCCAGCATCAGTTCATCGTTGATGATCTGGTACGCCGCCTCCTTGGGGA
TGGACTGCTCCGGTATCTTGAACCTCGGGAGCGCGGTGCGCACGTAGCGCGACGCGAAGG
TGGAGCAGATGAGGGACTCGCCGGAGTTCGTCTGCGCCCTGGACAACGCCATTCTGCCGC
TGGATCACTTCGCCGTCGTGGCGTACTACGAGAAGAGGAGGGTGAGCAGCGGGTGTCACA
GACGTACAGGTCGACGCAGCGGATCGAGTTGCGACCAATTAATGGTGGCTTCTTGTTGTA
TAGGAGAGGAGGGCGTGCATGGCCGCGACGTGGTGGAGGCGCCACGGTTCTTGGGGGGGA
GGGGGCTTCCACGCCATCCGCTCGCACGTCCAGCGCCGTGCACGGCTTCCGCCGCTGGAC
TCGGGCTCTGCTCGTAGCCGTGTACCTGGTTCTTCTCTCGGGCTCTGCTCGTAGCCGTGT
GCCTGGTTCTTCTGTGTTTTCGATTTTTTGTTTCGTCTTTTGCGTTCTGAATTATGGCTA
TACTCGTCATGTATATTATTATTTAGAAATAGATTAAATTGAACCGGCTGATTTTTACAT
CGAATCCAGCTGGATCATACGACCCTCATCGCTCACACGCGTACTCGCGTGCGTCAACTT
GTTTTAAGCACGCCGCCCCTCGCGTGACACACGCCCTTTCTCGAACTCATCGATCGCTTC
ATCCACCTTATCCTTCTTTCTTACCCGAGTCGTCTTCTTTCTTGGAGTCCTTCTTCCCCA
ATCCCATCTCCATGAACGAAAGATACCCAAGCAGGTTGTCTTTGCAAGCCCCGCCCAAAC
CGTCGTTGTGAGCTATACTGAGGTTGCAAGGCAAGGTGCCGACCACCGCTCCCAAGTCCC
AGGGCACCAGCATGCGAGATCGAGTCACGGCGGCGCCCCAACGCACCGATGGATGACCCC
TTCCAGCAGGCATGTTTGCGACCGGCCTTAGAGCACCAGCTGGCCATGGATCTCAAGGGA
AGGGGTGAGGCGATGCTTTGTGGTGCTGGAAAGCACTGACGGTGTCCAGCGCGGCGTGCT
CTGCTTGCGGTGGTGTAGTGAAGTCTGCCAGGTTGCAATGGAGCGCTTGCGGAGGCTGCA
ATGGAGCGTTCCGCGTGTAATTGAAGCTCCATCGGGGCTGCGTTGAAGCGACGTCGGAGC
TGCAATGAAGCGCACCGGAGCTTTATTGAAGCACGCTAGAGTTGCACCGAAACGTCACGG
GGGTCATTGAAGCTCGATGGGGGTGGCAATGGAGCGACGTCGGGGATTCTGATTGAGCGT
CGCTGGTGCTCGCGCCGCACGGTGCTGCCATGAAAGCTGTTGCGCTAAAGCTTTTTTCGG
CCGTGCTCGTAGTTGCCATTTGGGCAGCACCCGGATGGCTCCCCGGTGTTGCGATGCAGC
GGTTGCCGGCAGCTCCGGTCGGGTGCTGATATTGGATGATGTGTGTTGCGTGGTGAATGA
AAGAACAAAGGAGGAAGACGTTGACTCCGTTTGTTGCGATGGCACGGTCAGTATCCGTCG
GATCAGACGGCTGGGTAGGTGGCTTAATTTTGTAACACTTCAGCCGACTAATTTGTAGTA
GGCGTCTTATTTTTTCAAAATGGAGGTAAAAAGTTTTGCCTCATGGAAAGAAGGATGTCA
TCTAGCTCATCTTTTTTGGCCCAAGGGGGTAGACTCCAATACCTAAATTCTGCTTTATCC
TCCCTGCTAATCTTTTTCCTCTACAGTTTATTTATCCCACCAGGAATTCTTAAACAGTTG
GAAAGGATTGAGAGGCAATGTTTTTGGAGAAGGAATAGGCAGGAAAATTCACCTTCTCTT
GCTGCTTGGGATTTGATCTGCAGGCCCAAGAAAAAGGGTGGATTGGGCATTCCAAATCTG
GGGTTACAAAATGCAGCACTTTTATTGAAGCATGCCAACCAATTCCTGAACAGATTGGAT
CTCCCATGGGTAAAGCTAATCTGAAACACTTACTATCATGAGAGAATACCAGAGGGTACT
GAGCCATGTGGATCACATTGGTGGAGGAATATTTTGAAACTTTTGGATAATTTTAGAGAA
GTCACTTGGGTGCAAGTGAAGCAAGGGGATACTGTCCTTTTCTGGCAGGATAAATGGAAC
ATTGGTAACTCAGTAATCCCTCTTAAAGACAGATTCTCCAGACTATTCTCATATGTAAAG
GACCCCTGGACACTGGTCAAGGAAGGACTAAGCACTAATGACCTATCACTCTGGTTTAAT
TTGCCTCTTTCTGAGCATGCCTTCGTGGAGTTGTCTTCACTCCAAGTTCTTATAAGGGAT
TTTGAACCCAGCCCCAACCAACATGGTGTTTGGTCTTGGATGGGAACAAATAAGCCTTAT
ACACCAAAGTCCTTTTATTCCTATGTGCACAGAGAACTACCATTTAACCCTTTGCTAAAT
TAGATTTGGACTAGTTGTCGTACCTTGAAGATCAAGGTTTTTTTGCTTGGATGCTCATCA
TGGACATATTGAACACCAAGGACATGGTAGAAATGAGACATTGGCATATGGAGGATGGAG
TTAACTGTAGGATATGCCATGCCCAAGTCACGGAAGACATGGATCATCTGTTCTTCTCTT
GCCTTTTCAACAGTAGAGTGTGGAACTAGTTGCAGGTTGATTGGGGCGATAGTAACGATA
TGGCCGTTGCAGCATCCCATGCAAAAAAAATCTTTTCAGCAGCCTTTTTTCTGTGAGGTG
GTATTCATGGCTTGTTGGAATATTTGGCTTGTGAGAAATGCAAAGATTTTCCAAAATGTC
CAGCCTAGATTTGATGTGTGGAAATCATGATTTATAACTAATATGACACTTCTGGCACAC
ATGATAAAACCTAAGTTTAAGGAAGATTTGCCGAAATGGGTTTCTTTTTTGCCCCCCTTA
ATGTAGCATATGTATTAGGTTAGGTTCCTTAACTTTCACTCTTTTAATTTGGGTTACCGA
GGTTACCATGTATATATTGTAATATTCTGTTCAATAAAGCTTAGGGATAATTAGATTTAT
GCCCCTAGTTGTGTCCCACTCGGGTATTTTACCCCTAATATCCAAAGGTCACCGGTTGTG
TCCAAGTCACTTCGCTCCTCTTATGCTTTTGCCCTTTGACCGTTTGACCACCAGTTTGAA
AACTTCATAACTAATTCATACTAAATCAGAAAAATGCAAATGAGATAGCAAAATGTTCGG
AAAAACATCAGCTATATGTCAATGTCATTTGCATTCATGACAAAGGTGTTGTAAAGTGCC
CATCTGAGTTTTAGCTCTTATGATACCACCATGAATAGTAAAATATTAACAAAATCGAAA
AATTCTAAAAAAAATGGTGGCAAAGAATGACAAATGTTTTAAGTGCTTTCCAAGTTTCAT
CAGCGAACGACATTCGTGGAAGTCGTGGCAAAAGAAACAATCAACACTCCAAAATAAAAA
AAAATTGCCATGACTTCCACGAATGGCATTCCCTCATGAAACTTCGAAAGGACTTAAAAC
ATTTGTCATTCTTTGCCACCAAATAGTTTTTAGAATTTTTATATTTTTTATATTTTACTA
TTCATGATGGTATCATTAGAGCTAAAACTGGGATGGGAATTTTCCAACACCTTTGTCATG
AATGAAAATGACGCTAACACATAGGTGATGTTTTTTCGAACATTTTGGTATCTTATTTGC
ATTTTTCTGATTTAGTATGAATTAATAATGAAGTTTTCAAACTGAAGGTCAAACAGTCAA
AGGGCAAAAGCATAAGAGGAGCGAAGTGACTTGGACGTAACCGGTGAATTTTGGAAATTA
GGGGTAAAACCGCCGAGTGGGACACAACTAGGGGCATAAATCTAATTATCCCTAAAGCTT
ATAGGCTGTGGGGGGATTCTGCCCTTACATTATTCAGTAAAAAATGGGTGTGTCCATCAA
GGTTTATTGTGACAAACTAACCACCAAAGAAAGCAAAGACACAAATGATACAAGACGCTC
CAAACAAAACTCATGATATGTGACGAATAAAAGTATAGCTCCAAGTAAAATTACCGAT