Contig Data
morexGenes
Links



Map Locations of contig_50638 (7273 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_50638

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65765 1 1374 bp AK361278 Available Available None
MLOC_65766 1 603 bp MLOC_65766.1 Available Available None





CDS Structure of MLOC_65765






CDS Structure of MLOC_65766






Contig Sequence (7273 bp)

>contig_50638 7273 assembly3_WGSMorex_rbca.fasta
CAGCCTCTCTCTCCTCTCTTTTTATGATAGACACATCATATGCAAAAAAAGGAATCTTCC
TCTCTCTATATATATCTCTCCTCATGTGACCGGCTGGATGGGAGCGCGGCTGGAAATCCA
AGCCTCCCCAAACCGTTTTTTCGCCGGTTGGCCCCAGGCAACGCTATTTCGGCCCCGGTG
GACGCCTAACGGCTGGAGATGCTCTTAGCAGTGTCATTGCTACTACTAAACATTTATGAA
ATAGTTATTGTAGGAATGACACTACTAAACATTCATAATAGATGATATTCACGTTGTGTC
TGATGCATATATTGGGGGAAAACTCAACTTTGTAGAATAAAACCCTCAAACTAGATGGAT
AGTAATTATGGGGGTACAAATATGAGAGAAGAGCAACATATGGGTGCATTGAGGCATGTG
ACATGCATGTGGGGTGGTGTTTTTGACACATGACTGCTTTACTTACTTAAATCGTTAACA
AAGAAAAATGAAAGGAAGGAATGAAAACACAAAAATGGAAGAAAATGAAGCAAAGGAAAA
ATAACAAGAAAAAGTAACCAAAGAGAAAACCCTAGAAACCCGAAAGAAAAATTCGTCCAT
GAAATCTGCAAGATAACCAGGGCCGAGAAAAACCGTAAGAGAACAACCTTCAAACCCGTC
CTACTAATCGGTCGGCCAACTCAGGGGGTGGTTATCTCTTGCAATAGCATGAAATAGATT
TGAACTCCACTACAATTCTGACGTTGTTTCTTTGCCATGATAAATCATACATTTTTAATA
GTAAATTAGTTTATCCGATCATGAGAAGTATAGTTGGCGAACCTGACAAATTCGTTTCAG
TTCAATTTTCTGTCCTGCTTGTAAACCAAATTTATCATCATCATGTCAATATAAATGTCC
ATAAAAAACATCACATTTAACCTCCTTTTTAAAAAAAAAATAACACATCAGATTTTCCAT
CTCTAAAAAATCAACGTCAGATTTTTAGTGTTTTCGATAGATTTTGCAGGCCAGGCCAGT
GACGGAGACAAGGGGTGCCAGCCAGGGCCCTCCCCCTAACATTAGTGATTTAAGCCTAGA
ATAAACAGTAATAATTATTTTGTGTGTGTTAAAATAGTGTTTTTGATGGATTGATCCTGC
TTAACAAGGTTTAACTATACTTGGCCTTCCCTGTCCTAATTTTTGGGTCCGCCACTGTTG
CAGGCATCTGGGGCAGCAAAATGTACTCAATTTTTTTTCTTTCCAAATTCATAGGCGATC
ACCATGTGCTATTCCGGTGGCAAACAAGGAGTTTTCTCGTAGCAGGAATGCAACTATCGG
AAGCTTCGCGCCGGCAGATCACCGACACCGCGCGCAAAATCGTCCTCTTGTGCGTTCTTG
GCCGCCGCACCAAACCAAACCAGCCTCAGCGGACGGGAGGGACAGCAGAGCAGAGCACCG
ACTCCTGTCCATGTCCATGTGCGGCCGCCGCGGAGCGTGGAAGTCAGACAACGACAACCA
TCCGAGACGCGTCATCCCACCACCTCCGCCCGTGACAGCGCAGTGTATTAGATGGCCGGC
GCTAGCGCTTACCAAACCAACCACACTGGAGCAGAGCCAACGGCAGTATCCCGCCCGGTT
CCACTTCCACTCCACTTGCCTCCACATTTCCTCCTCCTTCCCAAGAAGCAGAGCCGAGCA
GAGCAGAGCAGAGCAGAGCAAGGTGTCATGGCGATGGCGCCGCGGGCTGTGTCCTTGTCG
GTCGCCGTGGTGGTGGCGCTCCTGGCAACGGCGGACTCGTGGCTGTACGAGGAGTTCACC
ACGGACGGCAACGTGCGCGCGGACTACAACGCGCAGGGGCAGCAGGTGGCGTCGCTCATC
CTCACACAACAGTCCGGCGGCGGCGCCTTCGGCTCCCGGCGCAAGTACCTCTACGGCGAG
TTCAGCATCCAGATGAAGCTCGTCCCCGGCAACTCCGCCGGCACCGTCACCTCCTTCTAC
GTACGCGTTAGATAAGATTAGATTCAATTCAGATCCGAGCATTATAAGTACATGGTTCAC
CAGATTGACTGACCCCGGTGTTACTTGCTGCCGCAGCTGTCGTCGGGCGACGGCCCCGGG
CACGACGAGATCGACATGGAGTTCATGGGCAACTCCACGGGGCAGCCGGTGGTGCTCAAC
ACCAACGTGTGGGCCAACGGCGACGGCAAGAAGGAGCACCAGTTCGACCTCTGGTTCGAC
CCGGCCGCCGACTACCACACCTACACCATCATCTGGAACCACAAGAACGTCATCTTCAAG
GTGGACGACCTCTTCATCCGCAGCTTCACGCGCTACGCCGACCTGCCCTACCCGGGCGCC
AAGCCCATGTCCGTGCACGCCACGCTCTGGGACGGCAGCTACTGGGCCACGCAGAAGGGC
AAGGTCCCCGTCGACTGGTCCGGCGCGCCCTTCGTCGTCTCCTACCGCGGCTACTCCGCC
GACGCGTGTGTGCCCAACGGCGACGGCCGCCCGCTCTCCTGCCCCGCCGGCACCGGCCGC
TGGATGGACCGCCAGCTCGACGACGCCGAGCGCGGCACCGTCGCCTGGGCCAGGCGCGAC
TACATGCGCTACAACTACTGCGACGATGGCTGGCGATTCCCGCAGGGCTTCCCCGCCGAG
TGCTCCCGCGGCTGAACAACCGATTGACTTCACTCACGCCTTCGTTAGTTCCCACGGATT
GTTCGTTGTCCATTCATTTCTGGTTTCTTGGTTTTGTTGGTCTATTTGTTCTTGATTCCG
TTAACTCTCCGCTTATTCTTACCTACTAGATGGATTAGACTAATGATAATAAAGTTCAAT
TCTTGGAGTAAATACTGGAACAAATAGTGAGCATTGTTCAATGAACTTGCCGTCCCGGCA
ACTGCACAATGGCGCATGTCTCGGACGTACAAACGAACCAGACTGTCAATCTCGGCTTCG
GCTCTGATTTGAATTACTTCGGGGTTCGCTGTAGCGCGAAGCACTAATTTTTCTCGGTGT
TTTCTTTTTAACGTTTGCCAATTTCTTTTCCAAACGCCGGCCACGGCGAGGGCGAATGAG
GCCTTATGCATCGCTTAGATGACGTGTCTACAGAAATAAATCATTTTTTAAGTACCGATG
ATTATTTATCTATTTTTAAAATTTAAAACGAAGGCAAAAGCTTTTGGAAATCGTTTAAAA
TTAATCGGTTTCGTAAGTCGCCTCTAACCTGTGCCACGCGTCCGGTTGGATCCACGCGCT
ACTTATCTCTGTTCCTCCCTTGTCCTTTCCTCCCCTTAGCTCTTCATGCTTAATCTCTGT
TCCTCCCTTATCCTTTCCTCCCCTTAGCTCTTCATGCAAAAGCGTTGAGCCATTCGTACT
TCTCCCCCTTTTTCTTCTTCACACATCCTAATCATGGCAGCGCTATCGTCCGCCACCGCT
CGCGTTGCTGCAACGACTTCTCCTACACGCCACACCGACACCGCTGTTGAAAACAGCCGT
CACCTTACGCCGCTGCACTGCAGCTCCCGCAAAGCTTGCTTGCGCCATCGTTGCCACCCG
CAACGTCGCAACTTCTGCCATGGCCGTCGTGTGCTGCATCACAACATCCTTCTTCATCTT
CTGCGCTGCAATGGACCGCTCCCGGGGCTGTAATGGAGCGCCGCCGAGGTCGTTGGAGCT
CTGTCGTGGTTACATTCGAGCTTCACCGGAGCTGCAATGGTGCTTTACTGGAGTTGCAAT
GGAGCTTTGCCGGAGGCTCGATGCGGCGTCATCGGCGGCTGTCGGGGGCAAGCATTTGGT
GTTGCATTGGGGTGGTCATCGTCGGCTCCATTGCAGCTCCATTGGGGAACTTGCCGGTGT
TGCTATGGAGCTATTGTCATGGCAGCTCTCCTGTGCTCCGATGGATGCTCGCCTGCGACT
TTCGGTGTTGCAGATGGAGGCTGGTTGGAGGTGACACGAGATTCCGAGAGAGAAACGTCT
GCGTGCGTATCTAAGGGCTGGAATGAATTGATTGGATGGCTGGGGACCCGACTGATTTCG
CTAGGAAAACAGTCGAATGATTCGTAGTAGTCACCAAAGCTTTGCCTTATTTCGTTAATA
AAGAAAAAGGGTAACAAGTTGTTCGGTTAATTAACAGGGAGCCACATGAAAACCGCTACA
AATACGTGCACAAAAAGAAAGGACACCTCGGTCGACCAGTCTACCCACAAGACTCACACA
CACCGCCAAGGAGAGGACATCGTCAAGGTTGCCAGCAATGTCATCGTCGTCACCTCTCCT
CGAGGAAGCGACTCTCACTCCATGGCTAACGACCTTTCAATACCCCAACAAACGAGCGAC
ATGCGAGAACTCCGTCGACCAATGCCAAACAGTTGACCAAACGCATCGAAGACCAGGCAG
CTCCGACTTCCATGACAAGACTCATAGGAGAAAGTAACTTGCATAGAACCAACATAGCTC
GACCTGCCCATCACACGACATCATTGCCGCCACGTCGCCCTGCAACTCTATAGCTCCAAC
TTCACGCTTAGGGATAATCCATATAGCAGACGACGAAGGAAAGTTACGATCCTACTCTTC
TTGCTACTATCACTGTCGCCACACAAGTGTCAACGCCACACAAACACCACCCTCCGGGCA
CCTGCCAGCCATGATGACGTGTACATCCATCCCGAAGGAAGCAAAAAAGGGATCAATATC
TTCATGGCGTTGTCCAAAGAGGGAAAATGACACCAAAGACGCCGATGCCGCCCGACCCTA
GAGCAGAATCTTTGCTTTCGGCCGACGAGCTTTCATTCAAGAGTTGAGGAAGCACATATC
TCCCCGACGACGCCTCCAAGGAGGATTACAACGTCCACGAACATCGTCGTCGCGTCCGAC
AACATCGGTTAAGTATTCATCCGGGGCAGCACAACCACCACTCCCACACTGCCAAGCACC
TCGACTGCCTACGCATCCCCTGCGTAGCAAATGTGCCGATCACAACACAGGGACCACCAT
CTCACAGCGCTGCCTCGCAATTCTGGCAATCCTTCATCGAAAGGCAGCCGCAAGAGGCGA
TGGTGCCCAGCCAGCTACCTGCATGAGACTAGTGCGCAACCCACGAACAGGGGGCTATTT
TTTATTAAATTTTATAAATAATATGCAGATTGAATTATTTTCAGGAATAATACACCATCG
GCCGCGACTTAGCCGATAGGCACGGCATCTTTCAACACTGAGGATGTACAAAGGCGAGCG
AAAGGGCCATGCATCTGTTGGCTACGCTACGGCCGAGAGGTGCCAGTCGGCTATGCCTTG
ACCGATGGTGTATTATTCTTGTAAATAATTCAAACTGCATATTATTTGTCAAATTTAATT
AAAAATGTATTACTCAAAAAAAATGGCCGCCACCCCTCCCCAACCACGCCGGCCAGATCC
GAAGCCGCAAGGCCCCCACAGGGAGCCACCGACCACATTGCTCACGGATCTGCAGCAGCA
TCAGCAAGGGACGACCGTCGGAGCAGCCAATCCCCCGGGATGCGGCCATGGCCACCAGGA
CGCCACCACTGCTGAGTGCTGAGCCGGATGAAGGAGCGCCCTCCCATCACCGAGGATTCG
CACCGCCGCGTAGGGGAACCCTCCGCATGCTTAGCCCGGCCGCATCTCCCGGCGACAGCA
AGGGGGTGCGGGAGAGTAGTTGGGCGCCGACAGCCGGCGGCTAGGTTTCTCCGAGTCGCT
TGGGGGCGATGCGGCGGTCAGATACCGGTGGAGCTGCTGCACGTGCACACACCAGGCGGT
GCTACTTACTGCTACCTACTCCTACCATGCTCATTCATTTGGTGGTTAGTAGTGCCAGAT
CTGTCGCCCCTCAAAGTGGGCAAATTCATGTGAGTTTAAGAGTGTACGTCCGCCCTTAAA
CTCGCTGAGACCACTTGGTTGGTTGGATCATATGCACCACTGCATTGTTTGGAGCTGGTA
AAAAAATCATAGGTTGTTAGTAATTATCATGTTTTTTTATGAAGTTTTGTGCCTATCAGA
GTAAGGACAGTAGTAAATGCGGCTGCCGACTGTAAGCTAATGCAATGTCACACATAGTCT
ACTCCCTCCATTTCTAAATATAAATCTTTTAAACAATTTCAACAGGTGTCTACATACGAA
GCAAAATGATTGAATGTAAACTCTAAAGTATGTCTATATACATNNNNATGTAGTTCACTA
GTGAAATCTCTACAANNNNNNATATTTAGGAACGGAGGGAGTATCTTATAGCTAACATTA
TAATACTCCCTTCGTCTGGTGAAGATTGTACGTTTGGCTTTAAAATTTGTTCACAAAAGA
ATGTACTTTTATCTTTCCAATACACTTTAAATTATAAAAAATGTTTCTCTCTCATCACAC
GGTAATTAAGATCAATAACATTCTACATATAGTCTTTTTAATTTCTACATGCACTTAGCT
CATTAGGGGTGGGTTAGGTAATTAAAGAGGACAGAGATGGTGGCTTGCACCTTTCCAATG
CATTTTTTTACTTCACTTTATAATTTGTCTTAAAATAGCTATATGTACACTTTTCACCGG
ACGGAGTAGTTGGTTGAAAGAGTGTACTAATTATTTATTGTATGGTTCACCTTTTCATTC
TTACAAAGTGTATAGGAGCACGTGTTGGAGTTGACTCTTAACGAAGAGTTTGCTTACCTT
TTCTCTCCTCTTCTCTTCCTCTAACTAAGCAAAAATATATTACTTTATTTCTTATAACCA
GAAACAGTTTTATTATACTTGCTCTCATTGCACTGGTGAGGACTTGTGGCATGATGATTG
ACGGATATGCTCCCAATCCATCGGGAAGTAGAATAGCATGCTTGATGTCACCTTGATTAC
TATTATTGGTCAAAGTCTGTACTATTGTAGTATGTAGCATGTTAACTACTACTAGTGAGA
TGGTGTGGTTTTGGGACCCTTGTCTTTGATTCGTCAGACCGTTATCACGCCTGTGGTCTC
TGATCGAAGAACATCACACATGTTGCCCCTGTAGTCTGTAGTGCCATTTCTTGGCTTGGC
TCCCATGTACATTTATTCCAGCACCTGCACATGGGGAACGGGGTGTAGTCCCTTTCTTTC
CCTGTCCATCGACCATGATTTGAATTACTTTGTGTTTTTTTCTAAATATTTGTTTAAAAA
GACCACTAGTCGAATGTTATTGTTAAAAAAGACCACATGCGGTATGAAATGCGAGAAAAT
ACCTTCATTTTTCGTGACGGCAGGCGCGTCAGGTGACGCGTGGCACCTGCCGTCACGGGC
CGAGACGGCTGGG