Contig Data
morexGenes
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Map Locations of contig_50625 (4012 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_50625

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65752 2 1056 bp MLOC_65752.1 Available Available LOC_Os01g67110.1, FRAME:+3, EVALUE:2e-58, 13101.m07276 protein expressed protein





CDS Structure of MLOC_65752






Contig Sequence (4012 bp)

>contig_50625 4012 assembly3_WGSMorex_rbca.fasta
TACTACCATTTGTTGTGCTACTAAATCCTTGATGCAGAGAGATATCCCACGTGCGATTGA
ATTGACAACTCAACTGTTACGACCAATAAATATTCTTTGGCTTTCCTTGTGCCGAATCAA
TAAATTAGGGTGAAATACTATCCTTGAAGACTGTCGCGACCCCCTATACTTGTGGGTTAT
CAGTGACGTGCAACAGATCATAGAACAACAACTCGACCTCCGCCCCCTTGAGCAGCATCC
GCAGGAGCACTTCGGCAATGGCGGTAAGTAATTTCCCCCTCCCCACCTACTACTTCACAT
TTGATTTGAGTTTAGGTTCGATCCGCGTTAGGAGAACGGGGAATTGGGGTAAACGCCATA
GGAGTGACTACCGATGGGTATGAGGTTTTCGATCCGGATTTAGTACAATAGGAATGAAGA
TTATGGTTCATCTTACACAATAGGCACAAATCTTAGCGTTGGGGACCGTGGGGGCGGTTG
GAGCGGCGGGTGGCCTTGGCCTTGGTCTTCTCCTCGAGCTGCTCCATTGTCTCTTCTTCT
TCGCCATAGTCTAACTCGATTAGCATGCTTGGGTATCCTGGCTTCTGTGCCCTCACAATC
ACCGTCGCCGAATCTTCTTCTTCCACCTCCATAGCCACCGCTTCTTGTTCCTACTCTAGA
AAAAAAATAAGTTTTAAGACAACATGAGCATCCCATGCCCCCTGCTTCACCACAGGGTGC
TGAACCGTGGACAAAATATTAATAGTTTGACAACAAGTTCTCCCATCACCGCTAAATAAC
CAGAAGTTCATACTAACGTAGTTCAGAGGGCGACAACTGTATCACCGATGCTATTGTGCG
TGCTGCAGCGCACCCTGCACCCAATGGAGTTGTCATGGTTGTAGATTTGAACCTTGAGGT
CAAGGCCGGAGATGCGCAGCACGACGAAGTTGCCGGGGACGATTCTGTGGCGGCGGCAGA
AGTAGTGCTAGCCTCGACCAAGCACCATTTGCCCCTCGAAGTTCTCGATCCGAACCTAGA
ACTCACACCACTTGTTCGCCCAGGCCTAACCACGTGCAGGAGCTTGACCGTGGGCCACTC
CTTCATCACCTCCATGAACTTGGGAGGGATGACGAGCATGACGAGATCCTCCTCGTCTTG
GATTTGCACGTAGAATCAAAGGGGCTCTCGGGCCCCTCCTCATGGACAGTCCTAGGAGCT
CGTCCCCTTGAAAGTGACACACTGATGAAGGCGACCCTGTCATGCAGGTTCACCCTCTTG
AGCCAACAGTTTGTGGGTATGCAATCAACGATGGCCTTTGCGCCGACAACGACATGGGTC
CTCCTCCGTCATTGTCCCACTTCATCTTCATCACCTTATCAGGTAAGAATACATCGATTA
GTAACATGGGCATTGGCATGATACGTTTGTACTAGTAGTACCTAAAGTATCAAACACATT
GGTCCTACCTATCATGAATGCCATGCACGTAGCAAAATCATGCATCAATCTAGCTAGCAT
GCACATGAACACGAAGCATGAACATCACAGACATCACCAATATAGCTAAGTAATACATGA
ACTCTAAGCATGAACATCAAACACATCACCTAACTCGCATCATGAACCCTAAGCATGAAC
ATAAAAAACATCACCTAACTAGCATGATGAACACATTGTTGCGCACGAGCACTAGGCATG
AACATGAAACACAATAGCTATCTACCATGTCCATGAACACAATGCACATCGTGAGCAGTA
CGCACTACGCTTGAACATGAAACACACAAAGAATTTGTTGCTTAGAACCCACTCGTACGT
GCCAATCCATTAGTCGTGTTGACCAGACAACTTGTCACGTGCGAATTAACTTGTGGTTGG
ATGGTTAGAGGGACCGACGTATCCCAGTCTATCAGGGTTCAATTCCTAGTGCTCGCATTT
ATTTCTGGATGTATTTCAGGATTTTCGACGATGCTAATTCAGTGGGAGGAGACGTTCCCG
TCGACGATGAGGCGTTTATGATGACTTTGTAGATCTGAAGATGATATGCTGGCTCAGTCT
CTTGGAGGTGTTCATAAGAATAGGGTATGCATGTGCGTTCATAGGGATGAGTGTATATCG
TATAGTATCGTGTTAAAAAAACTTGTCACATCTAGCAAATAGATGCTTATATTTTGAAGT
GAGGGAGTTTCTTAATTTTGGTTTACTTAGAGCATTTCCACCAGATTACAACACCGAAAT
AGCGATAGCGCGGGTATTTTTTCTCTCAAACAGATGCATAAAACACACGGCATCAAATCC
GAAGACCCTACTTGTAGCGGTCAGTGCGTATAATCCGACGCCCCAAATATGCAGCGTGGA
AGGTAACACGTCAAAAAATTACAGTGCAAACGCTGATGTTTTTTATGGCGCACTTTATTT
TATAGCTTGTGCTGGACACTGTTTTTGTCTCCGGCGTAAAAAAAAACATCGATTTTTAGT
GTGCCAGACATTTTATTTGTCGCTTGTTGAAGATGCTCTTAGAAAAATCGGAAGAAGGGG
GCTTGCTCTGTGTCCGGCTGGCCGACCCGCTTCCGTCCATAAAGGCAAAGCAACGGCTCT
CTCCCGACTAGCCGTTGCCCCTGGCGCCGCGCCCCCAACGGCCATCTCCACCGCGCCGCG
CGGCATAAAACCCGCCCACCCAACTCCTCCACTCCTCACTCCTCACTCCTCACTCACCAC
TCACCATCCCCAGTCCCGATCCACCCCACCAAGCAAGCAAATCCCTCTCGATCCGACCGC
GAGCCAACTCCCGCCGGCCGAGATGGCGTCCGGCAAGGTGCACACGCACAAGGCGTTCCT
CCTCTGCAACTACGCGCTGCTGGGCGCGGCCTCCAGCTGCATCTTCCTCACGCTGTCCCT
CCGCCTCCTGCCGTCGCCCTGCGGCCTGCTCCTCATCTTCCTCCACGCGCTCACCGCCGT
CTTGTCCGCGGCCGGGTGCTCCGGCTCCTTCACGGCCGGCCCGGCCAACCCGGCGCCCTG
GCACACCGCGCACACCGCCGGCGCCGCGCTCACCGCCATCTTCCAGGGCGCCGTCGCGCT
CCTCGCTTTCACCCGCACCGCCGACTTCCTCGCCGAGCTCCAGTCCTACGTCCGCGACGA
CGACGGCGCCGTCATCCTCAAGATGGTCGGCGGGCTCGGCACCGCCATCTTCGTCCTCGA
GTGGGCCGCCCTCGCGCTCGCCTTCTCCCTGCGCCTTGACGAGGACGACGACGGCGAGGA
CGACCTCCGCCGCGCCAAGAACTGGGCCGACGCCTACCATGTCTGAGCGGCGAGCCTCCG
CGCTCACCCGCTGGAGCGGCGGGCGACCGGTGCCTCCATCCAAGATGTGTCGATTTGGTG
TTATTGCTGTCGCTATTCTTTTGTGCTAGTGCCTAGTACTGTGCCTACCGAGATCTCAGA
TTCTTTTGTACTACTAAGATATGATGTCAAGGCAAATGTATATTGCTTTTGACCCCATTT
AATGGAAAAAAATATCATTATATTGCTTTGGATTTGGGTAATTGGTCGTAAGTGCTTGAT
TTATGCAGTCAACTGAATTATATTGCTTTGGATTTGGGTACTTGAGGCCTGTTTGGATGT
CCTCCGCTCCGCGTCTTCACTCCCGACGTTGGAGGAGCGGCACTTAAAACGCAGAGTGGG
GAAAGAGATATAGGCTTGCCGAACGCTCCTTGGTTGAAGTGCATGATTTATGCAGCCAGA
TTGAACTAGATTTATGCAGTCAGTCAATTCAGTTATAACTTGGGGAAACTTGTGCTGTCA
GAGTTCTTGCTGAAATCAAACAGGTTCAGTTATAAGAGCAAATACTAGTATAGCCAGCTG
CTGGCTATAAGCCATTGCCATGTTATCTATAGCTCATTTTATAGTCAACATGCACAATAG
TTCATTGCAAAAGTGTACTACTTCTTTATTATATGGTCCATCTTTTATACTCACAAAATG
CCTAGGAGCACGTGCTAGAGCTGGCTGTCCGCTTACCTTCTCTCTCCTCTTC