Contig Data
morexGenes
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Map Locations of contig_50621 (6396 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_50621

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65750 9 4847 bp MLOC_65750.3 Available Available LOC_Os05g05950.1, FRAME:-1, EVALUE:0.0, 13105.m00632 protein TOC159, putative, expressed





CDS Structure of MLOC_65750






Contig Sequence (6396 bp)

>contig_50621 6396 assembly3_WGSMorex_rbca.fasta
ACAATTAAAGAATCTTCTAATATTTATGATTTTGCACATGTTTTTTTGGACAAACGTATC
ATATTGTTGCTCATGTGATATAATGATGGGTTTTCAAATAATTTGTTATTTTATCTTGTG
TGTGTGAAGGAGGTGGAGAGGAAGGATTGTTTTCACCTGTTGCAACGCACGGTCATTTGT
GCTAGTGGAGAATAAAGCATGATTGTAGCCCTAACAAGTAGCACCACCTGAGATTGAGAC
TGAAACCAGTATGATACAACGTTTTATTTCTTTGCCATCATATGATACAGCCTGTTAACT
ACTACTCCCTGCCGAAAAGTCTTACATTTGTGAACAAAGGGAGTATAAAAAATAATACAA
GTTCTGGGTTTGTTCCAAGCCAATTAAACTTGTTTAAGTCTGACCAAGCCTATAGAAAAT
ATATTAACATCTAGAACATCAAATTAGTCTCTTGAGATTCTTGTAGAAATATATTTTCCT
ACTCTTTGTATTTCGTGTTGTAGATCTTGACACATTTTTCTATAGAACTGGCCAACAAAC
CTAGAACTTCAATTAATTTGGAACAAGGGAGTGGTCTCTAGCATGTAGTATGGCTGATTG
TAAGTTGTTAATGATTCCAATTCCACTATTCCAGAATGTCCTAGTGCAGATTTCAATGTG
CTGATTACCAGTGAGCATGACTTTATTCTAAAGCAAGCACTGTTTCTAACCCTGCAAAAT
CCCCAATGCAAGACCTTGTATCATTGCACATACCACCATGCAAAGCTGATAATACTTCGA
AATGCAGAAGCATCTGAATCTTGAAATGCAAACAGTGCTTATTTCCTGGTCATGCGGTAA
AGATCATCACAAGCACGATATGCCATAACAAAAAAAGATGGACAACGGTAATTGATAAAA
TGGTAGAAGGATCATATAGATCTACCAACATTATTGAACTATAGTTCCAGATGAATATGA
CAACACTCTCCAGCCAAAATTATGATAGGAACAATCTGCGGGGCAGAAAGGGAAAAATGG
AACTGATACAGATTACCGGTTTAAGAGATTAGGAAAATTGCTAACACAACACATGGATGA
GATATAAGTAAATAGATGCTCTTCTTGCCAAGCTAATAAGCAAACGATGGTTCACCGGGC
CGGAAGCTCCGGTAGATGGAGGCTATCACTGGGACAAGACCCAGCAGCGCGATCTGGACC
TGCTCCGATGTGCTTGTCCTGACGGTGATCTGTCCGCTCAGCTTGTTGTTGAGCCCAAGG
CGAACAGCCATCTTTGAACCCCTTCCAATCGAGAACTGGGACTGCAGATTAGCCCCCAGG
GCAAGGTCGCGGCGCCACTTCATGAGGGACAGGCCCAAGGTTGACAAGGACTGGCCAATT
GGATAATCTTTGTCTTTTAAGCGCGCTTCCAAATTTGCTCCATAGGCGGTATCCCCCTGA
GCCCGCATTGCACCTGTGCTTGCCACTAGCGCCAGCCTCTTACCAACAGAGAGCTGGTCC
TCGACCTTCAGCCCAGTGGCCACAATGTCACCCAAGAAAGTAACAGAGAATCCTCCAGTG
GTTTTGTTCTTCTTGATACTCTTGAATTTGGTCTCACCACGGAGGATATAAGCAAGCTGC
CGCCCAACAGTCTGGATGTCAAAACCAGCGAGGGAAGACGCGTCCTCTCCATGCTTTGCT
GAGATGGAAGAATCCAAATGGATGCTAAATTCCTTCTTGTCCTTGGTAACCTGAACTGCC
ACAGTACCTGGGAATTTGTTAAGGAGAGCGAGCGACTCTTCGACACTTACTCCATCATAG
CCACAGTCATGATCCCACCCATGCGCATCTAGAACAGGCCTTGCAAGGACAGTAGAGGTT
GGTTCCAGAAAGCGGTAACGGTATGTTGGATTGTCACAATCAAATGAAGGAGGAAGCACC
ATGTCAGGTAAGGGAACTGAAACATTTTCTGGAGGAGGATCCTGATCATTTTCGCCTGCG
ATACTAGCATACCCATAAGCATCCATATCAGACTTGCCTCTCTTCTTCATCTCCTTTAAC
CTGCGGAGCTCATCCTTCCACTGTTTCTTCTGGAGAAGCTTGACCCTGTAATCGTACTCA
TCAAAATAAGCATTCTTCTGCTCTTTTGTGAGCCTTGCAAGCTGAGCTTTGGTCAAAGGC
TTGAAGGGAGGAAGTTGATCATATTCCTCTTCATCTTCATCTTGTTCTATATCAGAATAC
TCATCCAAATCAATATCAGAATCTCCTTCGTTACCACCCTGGTCAGGGGAAAGTTTTGGG
TGAGCCCTTGACTGCAACAGCGAGGATAGCAGGAAAGGAAGTGGCGGGGAGCGGAAGCGG
AACCCAAAAAGCTTCCCAGGAGAAGGATCCTGAAGCTTCAAAAGCGAGTTGGCTTCTGAT
AATATCTTTGATGAGTAGCACAAGAGCAGCATCTGATGCCTCCAACTTTGGCCATTTGGA
AGCACTTTCTGACCCTCACGATTCTTCCGACAAGAAGGATGGTTCTCAACAAGGGCTACT
GGGTTCATCAGACGCATATCCCCTGCAGCCTGCCTGATGGATTGCTGGATAATGTGGGAT
CGCTGTGCCATCAATACCTCATATGTCATAGGGGCACCGTTGAGGCCTTCAGGAGGAGCA
GAAGCAGCATGGGTGAGAGCAACAATGGCATTGAACCATATGGAAGAACCCAGAACAGAA
GTAATGGTTTTTAGAAGAGGCAAATCATTAAGATCACGGCTCAGACTATCGAGACGGTCC
ACATATAGAACGATATCTGGGGGACATCTCTTGGTATATTTCTTGACGGATGAGAGAATT
TTCCTGTTGGCTCCTTGGTCCATCACATTGGGCCGAAGACCTGGTGTATCAATGATCCGA
ATCTTGACACCATCCACATTACCAACAATTTCACGCACGCTGGTGGTGGCTGCACCAAAA
GCATCAGTTTTGGACTTCACTTCGCCAAATATAGAATTTATAGTTGCACTTTTGCCAACT
CCAATCTTCCCCAAGACAAGTATGTTGCAGGAGAAGCTCAAATCCTCTTTTCCCTCCGCT
TCAAGCAGCAAGGCTTTCTTCCGTGCGTTCTCAAGGCTGAAAGCTCTGTTTGTCTGCCTT
CCATGTCGGATACCCTCGGCAAGGCTCAGACGGTACAGCACTTGTGCTGCTACTGTCTCT
TCAGGGGTCGCCCCCAATTTATAGACAAGGCGCAGAAACTTTACACGAATCAACTCAACC
TTGTCATGCAATTTCTTCTCTTCCTCTGTCATCTCGTCATTAGGCTCAGCAGTCACTGCT
AGCTCAGAGGGGCTGAAGAGGTTTGACCGGGCAGGTTGGCGGGGGGCAGTTGGCCTCAAA
GATGGGGCTGATGAGCCCAGACCAGCAGGTCTATCCATGGAAAAGATTCTGGAACCATCT
TGCGAAGAAACTGTGATGTTCCCATCCGGGGATGCACCAGTAGCAGCTTTCAGTAGGGCA
GCTAAAGCAGCAGAATCGAACCCCTTCTCATCATCATCCTCATTATCGTCGTCATCATCA
TCATCCTCAGAATCATCAAGAACAATCTGCCCATCCATGCTATTAGTGTACTCCCTTGAG
CTGCTCAAGCCAGACACAGGACTACCACTTGAGGATCCTTCACCAAGCTCCTTCATGATC
TGCTTTGCAGCTTCAGAGTTCTCTATGATTGCAACTCGTGCAGGACTCCTGTCAAAGCTC
ACCTCATCATCGTCCTCATCACCCTCATTACCACTCCCATCTTCCTCATCAGCTGCAGCT
AAAACAATCTCATCATCAACAGCCTCTACTTCATGGTCAGCAACATCTTCTGCACCATCA
TTCTCCTCACCACCTGTGTCTTCCTCATCAGCTGCATCTACAGTTTTCTGGTCATCAGCA
GCTGCAACCATAACTATCTCATCATCACCAGCCTCTTCTTTGTGGCTAATCACCTCTGCA
GCAGGTTCATTCTCATCGACATAATCATTGTTTTCCTTGACAGGTTCTGGAGCCAACTCC
CGAGACAAGATAACATCATCGCCACCAGCAACAACACTCTCAACCTCTGTAGGCTTCTCA
ACACCAACATTTTCCACACTTCCACTAGCAACCACCTGGTCCTCTGCATTTTGTGCCTTC
TCATTGCTTTCAGTAAGCGGAATGTCTGCGCTTGAAGGAGCAAGCTTCACCAAACTCTCC
GAGCTAATGTCATTGATAACCTGGTATGGATCATTCGAATTCTTTATATCCCAAATCCAC
ATTAATGTTAACATTACTAGCAAAGGAATTAGATAGAACATGCCCACTTACCTCAGGACT
TGCATCGTTTTCTGGCTCAGGCTTTGCCGCCTCATCTTTCTCATTAGCCTGGTAATCCAA
GCTACCATTGTCAATAACCTGGTTTGGATCATTTGATTTGTTTAAACCCCAATAGTGTCA
ACACTAGTAGTAGGTAGTAGCAACGAAATTATATTGGGCATGTCCACTTACCACTGGGCT
TGCATCGTTCACCGGATCAGGCTTTGCAGCCTCGTCTTCCACATTAGCATGGTTCTGAAC
TGGGCTTGCATCATTCACCAGATCAGGCTTTGCAGCCTCCTCTTCCACATTGGCATGGTT
CTCCACGGTACCGTTATCAACAACCTGGTTAATGGCATTTGAGTTGTTCACATCCTCTAA
TGGTGTCAACACAACTAGTAACAGAACTAGAACGAATATGTCCACTTACTACTGGACTTG
CAGTGCTCTCAGGCTCGGGCTTCACCGCCTCGTCTTCAACATCAACACGGTTACCGCCGT
CAGTAACCTGGATTGGGTCATTTGAATTGTTCATACAAAAATCCTACCAGTATCAATACC
ATCAACAAAAAAAAATTGATTGATGATGAAGAAGCCCACTTACCACTGGACTCGCATCAC
TTTCAGGCTCCTGCTTTGCAGGCTTGTCTTCCACATCAGCCTCATTCTCCAATGATGCTT
CTTTAGCCTCTTCACCTCCCACCGCCACCATCTCAGCAGGCTCTTCAGCCTCACCACCCA
AATTGCCATTGGCTTCAGCTGTAGGAGCCACCTTATCCTCCGGCTCCGCCGCCTCCATGC
TCCTGGTGGAGGCCGTAACCGCCTTCTCGCTGTCAAACTCACCATCATCTTCGCCTCCAG
TGGCCACCTCTGCAAGCTTCTCAGCCTCTGGTTTCTCCTCGGACAATTCAGCATCGACTG
CCACGTTGCTCACTTCCTTCACCTCCAAAGTGGCACTTTCCTCTGGTTCGCCGGTCAATT
CAGGCTTCTCCTCACCTACCGGCGCATCAGGGGATGGCAGGGAAGCAGCCCCCTCGCCCA
ATTCACCATTGTCGGATTCAGGCTTCACTGCAACAGGCGCCTGCACCAACAACGCAGCCT
TCACATCTTCCACCGTCAATCCTCGGTCACCTTCCTCCTGCTCCTTGGCCGCAGCCGCCG
CCTCCTCCTTCCCTTCTCCCTCCCCCTCGCTTGCATCTTTCCCATCTCGTACCGCTGGTT
CCACCTCCCCACCGTCCTCCGCCTCCTCGGCCCCGCCGTTGTTGGCCTCCGAACCAGTAA
AGCTACGGTCTTTCCCCTCAAATCTCACCTCCTCGCCCTCCCCTACTCCACCCACCTCCT
CCGGCGCCGCCCCGGCACTCTTGGTCCCCTCCGCCGCCGCAACCTCGTCCGCATCAGCCG
CCGGAGGCCGTTCGTCGGCCACGGGCGCGGCTCGGGCGTCGGTGGTCGCCATGCTGCCGC
CTCTTGCTCCGCCCACAAGCAAAACAGCAGCAGAAGTCGTCGGATTCCGTCGTCGGAGGA
GATGGAGGGGATGGGAGGGGAGAGGGGAGGAGAGGATAAGGTGAGGGTTTTAGGTTAGGC
TACTCGATTTATCTCGTGAGTATATATAGCTCAATTCGATTTGGGTCTGGTTTGGCGTGT
AATTCTGGGACGAGATGGCAGCCAGCCAGGGTCCAGGGGTGAGATGAGGAAGCAAGCAAT
GGGCAGATTTGGGGCGATGGTGATAAGGCGTTTATTTTTATGGACTTTTATTACTACTTA
AAATACAGTTGCACTATTTCATCTCGTTGAGGGCTCGCGCGTGAGCCGTCCGTTCACGAC
AAACTACTAACAAAAAGATGTCATTTCATCTCGCGATGTACCTGAGATGTATGGTCACTA
AGGATTCCCTCAGATCCACTGACTTCACGCTGCAGCATTAGCCCTTTACAGCCCTCTAAT
ATTCATCCAAAACTTATCCAACGATGTATATGAGATAAGGCAAAAACTTTAGCATTTAAC
TGTCTAGAAAAGGGCGGGCACGAAATTTGGGATTCGCGAGCACGTCCGGAACACTCCCGC
GCCGCCAACCAGTCGGAGAGGAGGGGCGGCCGCCGC