Map Locations of contig_50614 (6285 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50614

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65746 2 1928 bp AK356632 Available Available None





CDS Structure of MLOC_65746






Contig Sequence (6285 bp)

>contig_50614 6285 assembly3_WGSMorex_rbca.fasta
AGAGCATTCGGGTTCTTGCATTGTTTGTTGTGGTATTGGTGTTCCTGAGGTAATCCTTCC
TGAGCTAGCGGAGGCCATTGCAATCCAGAGAGGCTTGCAATTTGCTTTGAGTGAAGGTCT
TCAGGAGGTCTTACTTGCTTCTGGTTGTTTGACGGTTGTTCAGCGTATCAATTCGCCGAG
CCTGGATCGATCTATTTGTGGTCCTGTGATTCAAGACATCAAGCAACTTAGAGCTTTGTT
CATTAGTTGTTCTATATTTCATGTGCGTCGGGAACAAAATGTTGTTGCACATTTGTTGGC
TCGATCATGTAATCAGCTAGAGTGTCGTGTTTGGCGTGGTGTGTCTCCGGAATGCATCCG
GGAAACTATTTGTATGGACATTATACCATGATTTATAAAGTGGGTGTGTTATCAAAAAAA
ACAAGATCGTTCGATCGACGGCCACGAGTCGTTCGGTCTGGGTGTCTCTCAGACCGAGTG
TCAGTGCCATCGGCGTCCTAAAAGCTAAAATATTTAAAACAAAGAAAATATTTAAATTCA
TTCGAATGATTTCAAACTCACGTAAGCCTCTTTTTCCACGCAACACCTAACATGGGCCAC
CCATCGCTTTTCCATTCCAACCTTATTTTCTTCCTCCGCTCACATTTCTTCTAGTTGCTT
TCCCTTATCCCCATCTCTTTGGCTATGGGACACAAGCACCGCAGGCCATGGCATCAGCCA
CCGCGTCGCGACCCATCACATCAGCCATCATGTAGCAATTTCGCAATTTCATTGTCGTCG
TGCTGCATCACCGCATCTGCTGCCGCCGTCGCCGTGTTGTGTCACCACATCTGAAATCGC
CGCCGCGTGCTTCACCATGACGAGATCCCCTGGCACCCCCACGCGTGTGATGTGTCACAG
CAATTCAACGCCGTCGTGTTGCATCACAACATCAGCCACCGCCGCCGCGTGCTTCTTCGC
AGCACCCCGACGTTGTCGTGATGCAATGGAATGGAGCACCACGCGTCAGTGGCCGCGTTG
TAGGGAAGCTTCGTCAACGGCCCGGGTGCTGCGATGGAACCCGCCGTGCCGACTACGCAC
TATAGTGAAACATCACCGACGGTCCTCGGTTGCTGCGATGGAGCATCGATGGAGCACGGC
CATGCCAGCGACAACGCTGCAGTGAAGCGTCTTCGACGATGGAGCATAGTTGCGTTGTGG
CGAGATGGTGCGGCTCCTACTGCAACATGGGACGGCGTTGCTTCCAACTGCGACGCGCTT
TGGTTGCTCCCGACGCGCTTTGGTTGCTCCCGCTACGACTACGATGAGGAGGGGGACGAC
CCCGCAAGATTCCATTGACCAGATCCAATGAGTGACAGGCACCAAATCTGATGGCCCAGG
ACCCGACAGATTTCTCAGGGAAATTAGTCAATTGATCCGTAGCAGGCACCTTAAAAACAA
TTGCTAGTTATTGGTTCCAAATTTTGACGCAAGACATGCTAAAAGTTCACAGAATACCAC
CACAAGACAAGAGAAAGAGTCTATGAATGGTTGCATCTGCTGCCTCAGACAAATCGGACG
GTGTGCGGCCCAGTCACGCTTGGGAGAACGTTTGTGCTTTATGAAAGTATAATTATATAG
CTAGTGTAAGGTACTATACACGCCCTTTCAAAATATAAGTAGCATCACATGGACGTTAAA
ATGGGAATAATTGAAGACCAACAGCCCATCAGACATTCTTTATGGCCATCTAGGACATCC
TCCCTCTCAATCAGAGTCATCCTGAAAATGTGAAATACAATCAAATGCGTAGACGTATTA
TACATCTCCTACATATAGAACCAAATATATGCAGTATATAGAAAAACTGTAGCAAGAAAA
CAGCAGGAAAAAAAAGATGTCACTTGATTTACAGTACCTCACTGATACTATCCCACATAA
ATGGGAACTCGCAATCCACATGACCTCCAACATACAAACTTTCGCCAGCTGGATGCCTCA
AGTCCACAGAACCTTGATTCTTACAACCAAAGCAATGTCCTTCAAAAACAAAAATATTGA
ACTAATTTTTCAATATCCTAACAAGAGAGAGAATCATTTAAAGCATAGAAATCTTAATAA
AATACTACCTCCGTCCTAAAATTCTTGTCTAAGATTTGTGTAGATATGGATGTATCTAAC
ACTAAAACTTGACTAGATACATCTATATTTAGACAATAATTTTAGGACGGAGGGAGTATT
AAGTTCTAACTTAGTAATATGCTACAAAAAAAATTATCTACAACATCATAACTACCGTGT
GAAGATAGACGGCATGACTACACAACTGGGCAGCGAGTTGAAATGAGAATAGCCAGAGAA
AATAGACTGACTGCTCTTGTTTATCTCGCTAAATGCATAGCATTTTTCATATAATGTATG
GTGGATGCTTAGGTTTTCGAATTGTAAAATCCTAGAATTCCCAATGCATATTATTATTTC
CTAAAAGTAAGAGAACACACACATATACATGGTATTCATTCATGGTATTACCAGAATGTT
AACAAGAATAACAGGATATAACTCTTGTTCTCTACTATTACCAGAATGTTAACTAGAACT
GGAATCCTGATTTAGCCCGTTTCACTAGCTGGTGAAGGGAGTAGAGAAACAAAATACATG
CTTCCAACGAATAAAAAAAAATCTATGATAAATGATCATTTTAGGAGTGGCTGTCTCTCT
GCTCCTCTTGAGATCCCTGGCCATTGATTTTTCTATAGTTCAATATGCAGAGAATACCAT
GGTTATCATGAATGGTTCATCTGGTCGGATGCAGATTCTCATGAATACCTTGGAGGATTT
CGCTAAGGCTACAGGGCTCAGGGTTAGTTTGCCAAGTCCTTCAGCTAACTTCTATATATT
TATGTTCGATGGTCTTCAAGCAGACCCCATTTTCCCCAAGATTTGGAAGAGCAAGTGCTT
GCCCAAGCATAAGGTTTTTGCCTGGCTTTGATTATGGAAAGATTGGACACCAGAGATTTA
ATCATCAGAAGGCATATTGGCATCTACTCCCTCCGTTCCAAAATATAAGACCTTTTAGAG
ATTACACTAGAAGACTACGTACGGAGCAAAATGAGTGAATCTNNNNNNNNNNNTATGTCT
ATGTACATCCGTATGTAGGAGCTTGAGGACCGACCAGACCCTAGCGGAAGTGTCATCACC
GGCAAACAGAACCAGGAAGATAACAGACTCAAACCATGGTGATTGCCTCCTCATGTGAAG
GATGGCTTAAGGCAAGACTCTACTTGAATACAAATATAACTGTATCTATTTTTTTTTTAC
ACGCACAGGGATTCAATGTTATGTAAGACTCTTGCCTATGAACAAATCAAGTAGAGTACC
AATCAGAGACAAATCCTGACTAGATATGAAACAACAACTGGTAAGGTGACAGATCTAGGA
GACCTAACCATCTACGCCACACCTGCTGTATGTTAATCCCCACATGACAAAACATCAGAC
AGCAGTAGTAAATTTACACACAAAAACTTGCTCATCTATTCATATTAATCGAATTATTAT
AGTAATACTACTACTTAAGAAGTCACTTTGTATGGCTTTATATTTTTAAGATTAACAAAT
CCAATCCAAGCACGGCAAGTACATATAAATAGATTGACTATGCAAACTAGAGGGAAAGCA
ATTCATCAACGGTGCGTCTGGATTTAAGTCAAAAATTAAACTAGCCTTGCTGGGCAAGGT
TAGTCGGTTCGTTTGGACGGAAAATCTAGCTTTTGATGGCAATTAAGCCTGTAACCGCTT
CCAAAACCTCGCTCACGGGGGAGAGTCAATTTGGCTGGCTCATGCGGGCAAACCAAAAGG
CGCAAAAAGATCAATCCCACTTCCTGTACACCCATAACATAACTCCCTCGTCCATGAGTC
GTGGTCCAGGATGCACCGCTTCCATTTGAGTTGTTTTCACGTGATGTTATCCGTGTACTG
CATGTTGCAACCAAACAGCCAGATTTGCTCTTACGAGCTCTTGCTCAGACCGGCTAGGAA
AATCTACCCTAGCTAAGCAAGGCTAGCTGATGAACCAAACACACCGCAAATAAGAGTTCC
TAACATATTAGTAAATGCAAAACAGCATATTTCATGCAACCCGTTATATAGCACTACTAT
ATGACTAGTAGTCACGTACAATTAAGAAAGCATACCATTGTCATCAGAATCCAAAGGCTT
GCAGCAAAGAACATCACACAGTTCTCCTTCGTCTGGGATCACTTCAGCAAAAAATAGAAC
AGTGGAACCAGCCTGCTTAGCTGTAAAGTTGAAGTGTTCATAGAAGTTCATGTTTCCTTC
AATAATGAAAACTTCATCTTTACTTTCATCAAACACAAAACGCATCTCCTGAAAATATTT
CTCAGATTAAAACATGGAAATGTGCTCAAAATAAAGAGTTGCAAATTTATAAGGAAAGAG
CACAAACCCCAACAAGATCCTCGTCGTTGTTATATTTCTGTAAAGCATATGCCATGTACT
GTTTCTTACGGTCAGCATCACGCTTTAGCATTTCCTTTTTGGAATATTTCTTTTCTTCTA
CCTCTCTTTCACTAATTTCTTCACCCGCCGCTGCCTCCAAGTCACTCAACCTCCAACTTG
TCAAATTTCCAAATCTATCGGTAAGATAAGGATCTCCGATATCGACTTCATCGTCACTGC
CATCATTAGAACTGAAAAGGATTGCAAATGATTTCAAACAATTTTAAGAGAATAATCAAT
CATATAAGCACCCCATTGATAAATGAGTACAGATATTTTTATAAGAGAATTATGAACAAA
TCGTATATAAAATCATTACAGAAAGACTACTCGATAGTACGTCATCCATTATACATGGAC
CCGGATATATAGGGAACATCAGATTTTTAGGCATGGCAAATCGAACATTTTTCATGGCAA
ATTATGTTTGCCGAGGATGGCAAGTTTAGCTGATGAGCATGTCGAATTCGCCCCAGTTCA
TTTTTTTGCCAGGAATTTGCCGTGCTTGCAAACCAAATTTGCCATCCTCGCACCAACATA
AATTGCCATGAGAAACGTTTGATTTGCCATGTGTAAAAATCCGACGTCAGATTTTTAGCC
TTTCTGTTATACATAGCAGTCCCACATACAAATTTCTTTGAACTGGCAAATATGTGTTGG
ATTGCTAACCAGCTAGCAAGGCACGGTGACCTCTCTGTGATCAGCAAGATGAAACCTTCT
CTGATCTCCTCACTGGATGCAGAATATCACTTCACCCACAAATGACGATTTCAGGACATG
GTTAGCCTATGGTGCTGACCAAGTGATGGGAAATGTTATAAGAATGAGACCGTTCATCAT
ACTCTATGTGGCGCAACTGGAGCCATCGTAATGCATGTGTGTTTGATGGGGAGAGGCCAG
ACCACTAGTGTGACAGCCAAATGGAGGTGAAGTTGTATGGGGCAGCCACTTCTTGAATAC
AAATAAGTTCTTTTGACCTCAAAAGTAAGCCAGAGAATGCAAGATATTGCCACAAGCTTA
GACGTGTTCAGTGAGGTATGTTGCACATGGAACCAGATGATGACAAAGCAGGTTTGATAA
GTAGGTGGCTGATGAATATGAGAGGTCCAAGGTAAACGATTTGATTAGCTATCAGAGACC
GATTAAAAAAGAGTCCACTTAAGTTGTTTATCTTAGATTCTTTATCTCATCTACTGATCC
TATCTTTTAATCTCTTACATTTTCTTCTTTTGTACTTCTTTGGTGGGGAGCTTACGATGT
GCTTGCTTATGAGGCCCTAGCTTTATCCAAGCATATTGCCCGCATTTTTGCTCAACATCT
GGTTGTGGGCATAATTGGAGTGTTTTTGAGTTTGTAGATAGTTAGCGTCTTCTTGGTTGC
ATACTTTGTTAACTTGCAGCCTGTCGGGCCTCAGGGACCGGGGGTACCCAGGCCCGTCGG
CCTGCGGCCCCAGGCACGACGCGGCTGGGCAGGCCTGGTTCGGCCCATCGGCGAGCCCGG
CAAGGAAGGCCATCGCTAGGCAGGCATCTGAGGACCGTTGCCAAGGGCCACGAGAGGGCG
TTCGTCGCGAGGACGCGCCTTGAGGCCACCCCTGAGACTCTCGTGGGGCGGGCCCTGCGC
CCCGCGTGGGTGACGCAGGTTGCGCAGGCGGCACAGGAGCGGTGCCAGCGGGCACGGGCC
GGAAAGCTTTCCACTTTCATGCCAAAGGAGCAGGGTCAGCTGGCGGGCTCCTAAAACGAC
TCCCAAAGGTTTTCGGATCGGTGCAAGAGGACCAAGGCTAGGGGC