Map Locations of contig_50593 (10041 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_50593

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65736 3 1745 bp AK366843 Available Available None





CDS Structure of MLOC_65736






Contig Sequence (10041 bp)

>contig_50593 10041 assembly3_WGSMorex_rbca.fasta
AAGGTAATATTCTAGAAAGACTCAAATGTCTAAGCTTAGGGACACCCTGAAAGGCATCCC
CTCTTTCGTCTCGATCAATCGGTATGTCACTTGAAGCTATATGATGTTGGTCACATGAAA
AAAGATTATGGCCAGAATCTTCTGGCCTAGAGCACAGAGTGCATCCAGACGTTGCTCTAT
AATTGCACTTCCTGATTTGATCAGTCGTGGAAAAGTTATTGTTGATCGTTTGTCAAAGAA
AAATCTTAATCTTAAAGCGGAATACGAGCTCTCCACACCTCTGAAAATATATTAGTCACA
GACTCACGATGCCAGAGCATGGGTAAAGAGATCTCACCGAAAAGATACAAGAGGAAGTCA
GAGGACAGACGACATCATCCTCGGTATCCGAAAGCAAAGGGAAGGTGGCAATGACACAGT
GCTACATAAACAACTCCACGGGATCAAGGGAACGTCGAAAGGCCAAATCCCAACCCGAGC
CAGCCGGCTGATGAATAGTAATATTGAGGAGCATCCCCATGCCACCAGTCAAGCCAGAAG
CAAACCGATTTCTATTGTTAACCACAAACTTTACATTTCACAGAACACATTTCTAACCTT
GACAAAAGAAAGTCAAATCGTGCTTTTTCAGAAACTGTTCATATATTCGAAAATTATTTC
CATTTTTAACATTTGTTCAGGAATTTCAAGAAATGTTCGCGTCTTTGGGAAATTGTTTGG
AATGTTTTTGTTCTTGTATTGAAAACTTGATCACAAACTCAAAATATGCTCTTGTTTTCG
AATTATTGGTCACATATTCAATTTTTGTTCGTTATTCAATTTTGTTGAAATTTTCAGAAT
TTTTCTTCATATCAAAATTTGTTCTAAAAATTCAAGATATGTTCATGATTTAAAAAAGTG
TTCCCGTTTCTCAAAATTGCCAATAATACGAAAAAAATTCATGTTTACAAAAACGTTCAG
AATATTAAAAAAATGCCCTTTTTTGAAATGATGTTCGTATTTTCAAAAATGTTCAGGAAT
TTCAAAAAATGGTCCTGCTTCTCAAAAATTGTTTAATCATTCAAACATTGTACCCATTAT
CAAAAATTGTTCAAAATATTAAAAATTGCCTCATGAATTCAAATATTGTTTGTGTTTTCA
AAAAATGTTCGAGACTTTTGAAAAATGTTCAACAATATAAAAAGAGTTCCCATTACAAAT
TTTGTTCTCAAAATTCAATAAGTGTTTGATTTATTATAAAACATTGGGGATTTCAAAAAA
TATTGCACTTTCCAAAAGTTGTTCCCATTATCAAAATTTTGTTCTCAAAATTCAACAAAT
GTTTAGGAATTTCAAATTATTTCTGTCAAAAAATGTTACTTTTTAAAAATCTTTAAAATT
GTCGGATTTCTTCAAACAATTATCACAATTTCCAAATAAAGTTCGAAAAAAATCAAAAAA
CTGTCTGGATTCTACTTTGTGAATAGTTCTTATACCATCAGGCTCCGCTTTTTGAACGAA
TGTCTGTTAACTCCACTAGTTAGCTTCTCTTGTATGTAAGATGGAGGTCAAGAATTCAAA
TCCCAGTCCAGATTTTAGCGTGCTTCATTTTTCTTTTTGGCTGCGCTATCGGGGTTCTGT
GTGCATCGCGTGGCTGTTCGACGCAAAACGCGTCGAATAGGATCTCCCACTCTACCTTGT
AAAAATGTTTGACACAGTTCCAACACAAAATCAAAAGTGGGCTTAGCTAGGCATCAGACT
ACTGATGCTTTACATCCATGAGACTAGTCGTTGGCCATCGGATGAAAAGAAGGAGGTACG
TCCGATCTACTAACTTAGGCTCACAAAAGATTAGTTGTAGTTGCTAATTGAGTGCTTTCC
TAACTGCTCCCGTAATCCACGCGCCTGCATGATTGGCTCCATCCGTTCTTTTTCTTTCTT
CCTTCCTTCCTAGAACGTTGTTTTTTTGTTGGATGCTTCCATAAATCACCCTAGCTTACC
AAGTTTCTACACCTGTGTGATGGAAGCATGAAAATAAGTTTGTTCTTTTAGGAAACATGT
CCCTAAATTCTAGGTTATAAACCCTGTGAATGATGCTTCGATTCTAGGTGATAAATCTCC
AAAGTACTACATGGTTGTTTCTCTTCCATAACACATATGGCAACGGAAGCATGGGAAGAT
TCCTATCAGTATCAGACTACTGATTAGATGTGTTTCACATCAAAGTTAGATTCAATTACC
AGTTCAGATTTTTTAATTCCAATTCAAGCTGAAACAAATTTGATTCTAATTCATGTAAAA
AAAAGTTTGCTTCCAATTTAGTGCTTCCATCTATGGGACCTTCCAGGATTGATACTTTGT
TTTCTTCACCCGATTTATTTTTAGATATATTCTTTCATAAACTCAATATTTTTCTTCAAC
AATAGCCAAAGTAGTTTCGATCTAAGAGGAAATATGTATCCATTATAAATGTTTACTTTG
TATCCCAATGAAGCAAGAATTTGTTTCTGGCTACCAGAAAACCAGAAAATTTGTTTTCAC
TCAAATTTAAATTTGCATCAACGGCAACAATTAAATTTGCTTCCAATTAAACATAAAATG
GTTTCCACGGTGTCCAAGCGAACAAAAGTTTGCTTCTAAAGAAAAAGGAATCTGCTCCCA
TCCACATAAAAATCTAATACAATTAGAACATAACGAATTAATCTCATGCGAGGTACATGT
CTAAGATACTAAGATGGCTAGGAAGCAAGGGTATTGTCTTGGCCTGCGGTTGCATGATAG
GCAATGTGTAGGGGAGAGATCGCCTAATGAGTAGTTAGGAGAGCAACATCCTCAAGGGCA
GCCTTAATCGCTGTCTCCACCCATGTCTGCACCACCTCATTCATCGCCTTCAGATCGACA
CCATCAACATCATGATGAGAGGTTAATACGGCATTTTTGAGAAACTAGTGATACACGGTT
GGCATTGTTCGGTGCAAAGCATCTGCACAACATGAAGCAACAATTTGATATATCATGACA
TACATGATAGGTACTGGAAGCTTTACAAAATTGAGATGAAGAAAAAATTATATGTTGTAG
GGAACATATTCATAACATGAAAGTAGGAAGCATGGCTTACACAAAACAGTCGATCTTTCA
CACCATACATGGGGCTTTTGTTAAATTTGAAGGGTGCCAAAAAACACAAAAAGGTAGAAG
CATGAACTATAGAAGAAAACTACCTAAACCAAAGAAATATGTGTATCATAATATGGATGC
GTGGAATATTACAATGGTGATAAAAATGACAACAACACTTAAAAAGAACAACATGAACCA
TGGAAGCATTCTTACTAGACAGAAGAAGCATATGAAGTATAGTTTGGATGCCCCATAAGT
AGTAAAGATCTAAGACAACATCTTTCAATCTGCATGCCACATAACGCTTCGGCATACCCT
ATGTATGGAATTCTTCATGATTCCGGGTCAGCTGAAAACATAAGTGAAAGCATGTTACAA
CAACAATTTAAAAATATTGAATTGGAAGAAATATATATAGAGCCTAGAAGCATCTATGTA
TAGCAATTTAGATGCTACAGAACTAAGAAGCACAAAAATAATAGTTGGGAACAGATCTAA
ACTTGGATGGAACCAATTGCTACACATTCAGATTTTAATTGTCAGAACTGCAGAAGAATC
TAATTCTAGCACAATATTTTGTATCACAAAATTACACTACAGTAAACTAAGAGCAACTAG
GGGTGGAATATTAAGAGACCAGAGATGTGGATACCTAGAGGAGAAGGTATGTTGTTGCGT
GGGTGAAGGACACAACTTGGTACCTTTGTATGCATCGCAAATTGTTAGATGACTTTTCGT
AGGTGACTTGGGATGGGAACGCCAAGCATGGAGTTGGCGCCACTACGTGCGGTGATGGAA
GTTTTCCCTGTTGTGTATTGCCATGGGAGCCACTGCCATGACCGCTTGGTGGAGAGTCGG
GACGATGGAGGTGCACTACTGCCGCCGTCGAGTGGAACAGGGAGTTGTCGCCGCTGCTAG
GGTAAAACATGGGGACCAGATCTTGCTCGTGATGGGATCTGGTTTTAGGGGAGTTAAAAA
GGATAGACGTGAAAACGCAGGCTGCGTAGGATGGTTTTGTCAATCAATGGCGATGGAGGA
GCCTGAGCGGAGGATTCTATCAGACTATTGATGGAAAGAGTTTCCCAAATCAAAATGGGA
TGAATCGGAAGCTCAAGCTTCTTTTTGGCTGCGCTATCTGCGTGTGTCGCATGGTTGTTC
GACGCAAAACGCGTCGAATAGGAGCTCTCACTCTACCTTGTAAAAATGTTTGACACAGTT
CCAACACAAAACCTAAATGGACTAAATTGGAAGCTCAAGCTTACAACATGCCTACTCAAC
AAGGGCCCACGGGCCCAATAAAAGCAGCCCGGAATAAAACTACCCATAATGAAAGTAACA
TATGTACTAACATAGGTGTCAATTAAACAAAAAGTGTGATGTGATAACTAATAAATGAAA
AGAGAGAAATTGAGTAACTTTGGTAGTTACTCACACTACGATTAACATAACGCATGCAAA
GGTAAGATGAGTCTATAAGCTAATAAGTAAAATGCCCTATATTTTTTGGAACGCGGTCCC
TTAGGGCCCGATTCATTAAAAAAAGTCGAAAAGAGTTGTTCGGTTAATAAATGGAAAACC
GGGTTGAAATCGTTACAATAAGCCTACCAAAACAAGGCACACAGGGCGATGTGGCAACCT
ACACAAGAATACACACGCGCCGCCAAGAAGAAGAGCGGCGTCGACGTTGCAATCCGGCAT
CATTGTCTTCACACCTCCGTGAGTGCAACTCCGATTACGCCATCGACGACCACCGACGTA
GCCTCCACCGCAGACGAGCACACAGGCCTCCGGCGGTCAATGCCAAACAGTCCACCACAC
GCGCCGGCGACCACGCAGCTTTGACTTCATCGACGAGCATTGAAGGATAAAGAGCGTTGG
ACCTGCGCCGAGCCAGCGCCGGAACCGACCACCCATCTCGCGTCATCGTCACCACAAGGC
TCCTCCTCAAACAGCTCCAACTTCAGAAGACAAGAGAGGCATGGCGACCCCTCGAACATG
ACGGATGAGACCGACTACCAGAACACAGCAGCAACTCCTACTCCGCTTGAAGCGACCATC
GTTGCCACACAAAAAGCCGCGCAGAGCATCCACATTCCCGGACGGCCCCCAGCCGACCGA
AATGTCGCGAACATCTATCCCATGGAGCATGCAAACGAGATCCAAAGCTCTTCAAGATGA
CGCCCCCAAGAAGGAAGCGACGATGCCGACAACGTCGTCCAACCCAAACGGGCCTAAGAT
TTTCACCCGAAGAACTGGATCCGAGGGTGTGCAAGGAGAGACTCCTCGACGGTACCTCCA
AGGAGGTGAGACGACATCCACAGACGCCGACACCATCGGCCGGCAAGCTTTCGCCTGGAG
CACCTCCCAACACCACAACCCCACGCACATCACCTCCGCTAGCCCGCACGCCTCACACAA
AGCCATCACGGCATGACCACGCAGAAGCCACCACCAACATCCAAAAGTCCCCACAGCCTG
GAACTTGGTCATGGAGACAAGTTGCAGCGACGATGACCTCAACAGGGTCACGAAGTCCGT
AGACGCCACCATCATCGCCCCCGATCGCAGCCAGGCATGGTTTTCACCGCTAGCTGCACC
ACACGACGAAGACCGGCTGGTCCAACCGGCATAGCACGACCACCGCTTCGCCAGCACGAG
CACTATAGTCATTGCCACCCACCACCGCCTCAGGATCCATCCTCCACCGCAAACCACTGC
TCAGCCAGGGAAGGTCGACTAGGCCCGTCGGCATAGGATCCGCCTCGCCGGATCTGAAGG
CACAGGAGGAGCCTGACCAGATCGACGACCGCCCCGCGCCTCGCTGCGAGAGGCCAGCCA
ACATTCAAAGATGCCGCTGGGGGGCCCGAAGCTTGACCGCAGATCGTGGATCCGTCGTTG
CCGCGAAGCCGGAGAAACGCGGGAGTAGAGGGCGCCACGGTCGCCGGGCCCCGTCCAGCT
CGCAAGAAGCCGGCACGCCACCGCCGAAGCAGGAGTAGCACACCGCGCCGCCGGAAGCCA
CACCCAAGGAGAAGACGACGTCACGAGAGAGGGTCTGAATCAGAGGGGAAAAGAAGTCGC
CGCGGGATGCCCCGCCGCCGCCATCCGCCACCCGGGCTTAGCCCGGCAGCATCCTTCGAT
GGCGACGAGGGAGGGGAGGGGGCAGGTGGGTGGCGGCGGCGGTGGGAAGGGTTTCCGCCC
GAGCCGCCCGTGAAGGCGATGCCGGGGAGTATAATCAACGGGATCGGATCACCGGACAAG
TTGACGCGAGAATGGTGCCTAAAAGGCTCAATATTACTACGACTATGTTATTATTTACTG
TAGTGGTAGTAACTTAGACTAATAAGATATACTCCCTTTGTCCCAAAATAAGTGACTCAA
AAATAACTCAGTTTCATACTAACTTTAGTATAAAATAAAGTCATTTTTGAGTCACCTATT
TTGAAACGGGGAGAGTACATATTACTACTCTATGTTACTCCCCATTGTAAATAGTTAATA
AAAGTTAATCGCCGGACAGTTAAAACAGTCCAAGTCAGGACTGAACAAACTAACCTGTTC
AATAACTGTCAAACTGTTGGGCTTACTGTTCCAACCTGCATCATGTGTTTAGCTGTGAGC
GTTTGGACACTCCTCCGTACCGTCCAAAAGATGTGGGCATATGCAGCATGGACCAAGGGG
AAAGCTTCAGATCAGACTCTTTAGACTTTAGAGAGGTCTCCTGCTCTGTCAATATGTCTG
TATCAATTTAATTCATGACCCCATTATCCACCACTGTTTGTTCGTTTGCCCCTCTCTAGA
GCTCCGGAGACGGTCCCCATTTTGTCGCCGATCTAGCATCCTAAGCATGCAGCCATTAAC
CTTGCACAGTTGCGAGATCTGAAGAAGAAGAATAAAAGGCTGCGACATCTGAAAGCCTAT
GAATGAATCCTGAATCCGGTGTTTCTGGCCAGTTAACTTCTCCCAACACATAGCCAAGCT
GGATTTTAAATAACTCGCAGACAGTACTTCTATTAACCACTTGGCACAATTTGGCGATCA
AGTGAAGGGCAATCTTTGCATACAAATTACAAATTTCCTATATAAAGACGTAAATAAATA
AATAAAGAGCATAGAAAGGCAGTTCATGGAGCTAGTACAAATGGCGATCCAACTTTGGGA
TCTTCTGAGCAATGTGCTTATCAGCAATAAGTAGTATATATAGATACTATACTAGTGCTA
TTGGTCTTGGTTCTTGGCAGTCCAATACGTCTTGGCGACCAGGAGGATCTTCTCCCGGAC
GAGCGGGCCGTCTTCGTGGTCGACGATCTGGCTGTCCCACCTCATCCCGTCGGCGACGCT
CTTGACCTTCACCAGTATGTCCACGTCGTCTCTGATGATCACTGTGCCCTCAGGCCTCAG
GATCCTGTCCATCTCCAGCAGAATGGTGTCCATCTCACACCTTGCAGAGTAGCCAGCCCG
TCAGTCGTCAGAGAGTGTAAACACTGACGCAAATTACAGGGGAGTTTTGATGCAGATTAC
AGTATGTTACTACCTGTTCCTGTACAGAGTGAACACGGAGTCGGCATGGATGAGATCGTA
GGTCCGTGGATAGGTGGACGTGCCCTCGCACCTGCAGTGAATTAATGAATGCACCGAGAT
CAGAAACCCATGCGAAACCACGACGCCGACACCGACACCGGCACACCGCTGGTGATCACT
GTGGTAGGGACGGCCATGCAGTAGCTAGTACGACTGGTGTGCCCGGTGGTAAGAGGACTA
ACCAGTCCTGGTAGCTTCCGATGAGGCCGCGCTCGTAGACCACCCCGAGTGCGCTGGAGT
TGGCCACGGTCGGGACCATGTTCATGACCCACAGCGGGTAACTCGCCAGCGCCGCCGCGA
AACCGCCGAGGCGGGCGTTCATGTCGAGCACGTTGCGGTACCGTCCTTTCTGCTCGAACT
GGTTGATCACCGCCTTGTAGTGGCGGACCCTCTTCCTCCACAGCTCCGTGTCCTGCAAGA
ACGCCTTGGCCGTCACGCCCTTCACCGTGCCCCGGGAGACCCTGGGCGGCACGGCGGTGA
GCCTCTGCGGCCATTTCTTCACCGCGCCGCCGGCCACCTCGCTCGCGTCCGAGACCTCCG
GCAGTGGCGTCACGCAGGCCTCCATCTTGTCGTACCTACCGCAAGAGGTCAATTACAACC
AACAATGAAACTACCTACTGTCAGTAGTAAGTAAAAGTTGATGGCTCGATGTGATTACCA
TGCTGCGTCGGCGTTTTTCTTGGAGCAGAAAGGCGGGGACTTGGCGGCCTTCCAGAATGC
CTTGCAGCCGGCGTGGTTGTCGGGTTTCTGCCAGACGGCGATGTCGCCGGCCTCCTTGAT
CTTCTTCCAGCAGAGGCTCCGGGCGACCGCCTCGATCGCCTCCTGCTCGGCGTTGAGGTC
CTCCTTGCTCCTCTCCCACCCCTTCCAGTACTTCTTCCAGTTGATCGGCGGCCCGGACAG
GATCCAGTACCCGCCGGGGCGCAACACGCGGTCGACCTCGATCAGGTACAGTCCATCTGC
ATTTGCTTGAGTGACCATGGGTGGAATAATGGAAGTGCGTTCCGGTGAAGAGATGAGGGT
GGGCGTAGCGTACCGTAGAGGTGCCAGGGGATGAGGCAGCGGGAGCAGTGCGCCATGTCG
AAGGCGCGGGCCGGGTAGGTGAGGCGGTTGGAGGCGAGGACGCCGATCATGGCGGGGACG
CCGCGCTCCAGCGCGAACTGCACCTGCGCCTCGTGCGAATCCCGTGGCGCGAAGGACATG
GCCAGGATGTCCCTCGACAGCAGGTACGCGCCCCAGCTCGCCACCTGCAGCACGGCCCGC
TCACTCGTCACTCGTCAGAGAGGAATGCTACGTACCGCTCCTACTACGTGCCATTTCCAT
GCTACGTACTACCACCACGGCCGGTTTGTTCTGAGGTCAAAACTGGAAAGTTTCTTCCTA
CGGGATTACTTCAGAGTTCAGATTGCAGGCCGGCGTTTGCGCAGGCAAGTGGTTCTGAAA
TTCAGCCGTATGCGGATCAGCCAATGCACGTGAAGCGAAGGCAGTACATTTGTTCACGAA
AAAGTTACCCTGTAAACGTTACTGAAAAGATAGACGACACTTGAACGGTGTCGCAGGTGC
AGACTGGCAATGCCCATAATTGCCCTACTGTGCATTCGTTGAAAAAAGATGGCCATTTTT
TTGTCAATAATTTTGTGGCACCAGTTGAAAAGCGACAAGTCAAGTTTTCTTTGATGGATG
ACAGCTGAGAACTGACTAGTCCAGGAGAAGCGAATTTTACAGTCCACTCGTGCTGTTTCA
ACCAAATTTGTTATCTTTACTCGTACTAGATGTAGTTCATAGTTGCATAATTCACAGGTT
TAGGTGAAAATTTGAACAATGTGCTATGTACTGCACTTTGTTCAACATTCTGCAGTTTCT
TCTCTCTAGTACTACTACTATCTGAGTAACTGACGGACCTGTTTGTCCTCGGCTGAGCAA
GAGATGTTCGTGTTTCCATTTCTAATACTACCACAAGAATCGGTTTCGAGCAAGCAATCC
ATTCTAAACCTAGTTAATTAAGAAGCTTGGTAACTTACCCCGCAGCCGGTGTCGAGCGCG
GTGCGGATGGAGCCGTCGTGGAGCGGGATGAGCTTCCCGATGTCGTCGATGTAGGCGTCG
GCGCCGTGCGGGAACATGGTCCCGCCGCCGGGGAACCGGAGCTTGTCCCCGTCGACGCGG
ATCCAGTTCTGCACCGCCTTCTCCACGGTGAGCTCCTTGTGCGGCACGTTGGCGAACCAC
GCGACGTCCCGGCTGGCCGGCCACGGGAACGGGTTGCGGTACCCGGCCGGCGCCGGCACC
AGGCACCGCAGCCGCTCGCGCCCCGAGGGGCAGTGCCGCTCCCGGTACACCAGCCGCTGC
CTCGGGTCCCGCCGCGGCCGC