Contig Data
morexGenes
Links



Map Locations of contig_50589 (6302 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50589

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65731 1 2412 bp MLOC_65731.1 Available Available LOC_Os08g01360.2, FRAME:+1, EVALUE:0.0, 13108.m00054 protein RING finger protein 13, putative, expressed





CDS Structure of MLOC_65731






Contig Sequence (6302 bp)

>contig_50589 6302 assembly3_WGSMorex_rbca.fasta
CGCCGCCGCCTGAGGCAGCTGTCGGGTTAGCCCGAGGTGTTGTCAAGGATGGCGGTGAAG
GGGCCCTCAGCTGCCCTGCCCTGTCGTGGGGAGTCATGGATCGGAGCGGCGGCCTTCGAC
GGTGCGGACGACGGATCCGGGATCCCTGGTCACTTGGGTGGCGGGATCTTGGTGGAGGTG
GGCGGCCGGTTGCTGCTTCGGCGGCCGGCGACACAAGATCCGTGGCGTTCCCCTCTCCTG
ATTGGCGTGCGGGCCCCTCTGGCTGGGTGGTGCCTCTTGTGGTCGTCGGTACCTGGACAG
GGGGTGGTTTGTGGGGTTGGGGCCGTCCTGGCGAAATCCATGGCCGGCTTGGCCGGCCGC
GCCGACGGTGACGCCTGCAGGCGCCGTTCCCCTTCCTGGAGGTGTTGCTATGGAATGTCC
CCCTCCACTTCCCCTTCCTCTAGGTCTCCGGGGCGAAAGCCCTAACTTTGTTGGGCGGCG
ATGGCGCTCCTAGTGTCGTTCCCTTCTTGAAGGCGCCGCCTTTGGAGCCTTTTGGTTGGT
GGGCGCTTGTGGTCGGTTGGTGGCACCGGCGGTGTGGCCCTCTTTGTCCTGGCATGATGC
TCCCCCTCTTCCGGTGCTGGACGTGTGCAGCGGCCTTGTTCTGCACAAGGAGAGCCTCCG
ATGACTCGTGGCGATGCGCTGACCCTCTCTATGTGGTCATCTCCGACGGCGACCACCCAC
CTGTCGACGGTGCGGCGCCTTCGATCCAGGCGAGGAGGTTGTGGCCGCCTTCAAAGTTGG
GTGTTGGATGAGATGTGTCGGGGTCCGTAGGTGCATGGCGACGACATGCCCCGCTGATGC
CGGTCCCTCTCTCCTTTGTGCTTGCGCGATCTTGGTCCTGGTGCTACATTCTCGATCGAG
GACCTTGGCATCTTCAGCTTTACCCTTCATTGCTTATCTTCAATTGTCGTGGTGTGTGAG
ATTTAGTTTTATGTTATCCGTCGTTTTTGTATCTTTCGTCATGTGTTTTCTTCTTTTTGC
CTGAGGGCGTGTGCTTGTAATCCTGGCCGGTTGATGGCTTTGTTAATTCAAAGTCGGGCT
AGGCTCAAGCCTCATCTCGGTCTCGGTTGATGCCTTTTCTCTAAAAAAAACGGAGTAGAC
GGTAACCCACCATCTAAGTTCGAGTTATTCTGAAATTTCATTTCTTACCATCTTATTGAA
AAAGGTCCCCTCCCGCTTTTTATTCCAAAACAACCAACACCGTACACAGAACATTGCTGG
GGCGAACAACACATCAAGCCCAAAAAAATAAAAATAAAACAAATGCCAACAACGGTAGTT
CGACAAAGAGCGGATGATCCACCATCGCTGCGCCTTCCAGAGACAAACCACCACAGCCCG
AAGCTCCGATCCGCCGCGTGCCAAACATCACCTCCAAGAAGGGATGCGACATCGACGACG
CTGCTGCCCGGACGAGTCGCACGGTTTCCTCCCGCACGCGGAAGGAGGTAGGGGATGGAT
ACCACCGACACCCTCCAGGAAGGAATGGTGGCACCCGCCGGTGTCACCGCATCGGAGCCG
GACGAACCTGTAAGGATTTCTCCCGCACTCCGAACCCCACCGCCCAACCGGAGCTGACCA
GCCAAACCATCGCCCAATCCCATGCGTCATCACGGTAGCGCCACCATCCACGTTGTCTCA
CTGCGAACACCACACGATGCCAAGGAGACCCAAAAGAGGCGCCCAATACCATGCGTCATC
ACGGTAGCGAACACCACATGATGCCAAGGAGACCCAAGAGAGGCGCCCAATACCATGCGT
CATCACGCGAACACCACATGATGCCAAGGAGACCCAAGAGAGGCGCCCAATACCATGCGT
CATCACGGTAGCGCCACCATCCATGGTTGGTGCACGCATGAACTTTCTTTGTTTCTAAAT
ATAAACCTTTTAAAAGATTTCGCTACGAACTATGTATTAGATACCGATATATATAGATAT
ATTTTAAAATATAGATTCATTTGTTTTGTTTCTTATGTAGTCCTAAAAAACTTATATCTA
GGAAACGGAGGGAGTATTTTGTAATGCTTAACAAAAAACAGCCCCAAAACAAATACCACT
AACAGCCAGACCAAAAACCAACAAACAAAAAACATACAAGCAGTATAAACATGATTACAG
GTCCGCCATAGGCACCGATAGATAAAACCTTTAAAACAAAGTGAGAACAATCAAGATTCA
AGATTAATATATTTCTGTCAAGCATTCGTGAACAGAATATATACGTCATCTTACTAGCAC
AAGGCATTTCTGACTGCAACTAACAGTAGATCCCTATCAAACTGCAATAATATACACTCT
TGGCATCATCAGTAGCACACACGCCTCAAGACAATCCTTGCACACTCAGTGTGGTCAGCG
GAGTCATTTCCAGCCTTCAAGGTTCCCAGCTAGTTGGTCAGATTAAAGGTCACCGGTTCT
ATTATCTTTTTACAGGCACCTCCCTCTTGCTCATTCAAATCCGCTTCAGTCGATAGTGGC
CGCCTCTGAACGCTTCATGGAGAGCTTATTCTATGGTAACAGGTGTAACTGGATTTCAAT
GGTGAACCTGTACGGGCAATCAACACCCTGGCAGCGACTGAGCTGACGTCGCAGCAGATA
AGCTCGCATCAGAATCGGAGCAATGCTGCAGGTAGGCCTGAGGGAGCGACTGAGTCGATG
CTGAAGCTGATAGACTCGTCGCTGAGTCGTCGCCACCCTGCAGCTGGGTCTGTTGCGGTG
ACTGGGGCACCATCGTAAATAAGCTCGGCCCTGACTCCGTGCGATGCCTCAAGTAAGGGT
ACTGCTGCCCTGAAGAGCCAGGATAATAGCTTGGAGACCCGTTGTCGGAACGGGGCATGT
GGGGTGAACCTACAAACTGTCCAGAGAGTCCGTAGCCGAAAGGGGAGACATGTGGTGATG
TGTATCTGATGCTGATCGGAGGAGAAAAATGCCCTCCGCCCAGGGAGTGCGCAGATGCAA
GGTGTGAAGAGTTAGACCAGGGCGATGACATTTTCGCAAGGTCTACATTGCTCCTACTTG
TACTGATAGCAGGTGAGTTGGAATAAGATCTGCACTGGTTACGGGTGTGGGGGATACTGA
AATTGGAGTTAGTGCGGGACATGGACTGCCATGAAGGATGTCGGCTTATTGTCCTTGGAG
GAGATGCTGCTACCATTGACCGAAAAGAAGACAAAGCTGTCGATTCAGCTGGTAAGGGGA
TAGCAGAAGAAAGCAAAGGGGTGGACTCTGATGGAGGGAGATTTGACGTTCCAGCATTTG
CATCTCGCTTGCATACAGGGCAGAATGTCCTCCATGATGTGAGCCACAGGTCCACACAAG
CAGCATGGAACTCTGTAAGATGACACAGCCAAGTCTCAGTGCACTGGTTGAAAAATAAAG
CATGAGATAACAAAGAGTTCAGTAGCACTGCAACACTTAATTTTCTGATCTCATATCATA
TAATTCGTAGTGTGGATTTATCTACATTAAGTGACCAGGAAACAAATGAAATCTAGCAAG
ACTATATTCAATTGAGTTTGTATTTCAAACCGACCAAGGGATATTATGTGGAGTTATCGT
GATTATGATGTAAGTTTTGATCAGTGATACCACTCTCTTGCTACTATTCTAGTAGCAAGT
ATATTCTATCTCCTAACTTTAAATCAGCAATGAGTAGTAGAGACAGATTAATCTGGTTGT
GAATAAATTGCACAGGCATCAAGATCCCAAATCATCAGGTTTTATTATGCAATAACTAGA
AAATAGTTCTGATATTTAAATGTGAGAAGAACATACTGTGACGACAAGGAAGCACCCTTA
TCTTTTCACCAACACTGTAGTCTTCCAGGCAAATGGCACATGTTGACGAAGTACAATTGT
CTTCCTGGACTTTTGTAAAAATAAGACTTGGCATTGCCTTGACTAATTGACTACTCATTC
CATGAAATTCTCGTGCTGCAGGTATTCGAACCCTGTCCCTTCTCATTTGGTGTCTTCTCA
CAAAGAAACAAGTGGCCAGAACAGCAGACATAGCAAGCAGTGCTGTGAAAGAAATTGCCA
TGATTGACAAAGCTGAGTTATCACGCGTTGATATTATCCACACCTGAGCATCACTTTGAC
CTGAATATTTTTTCAACACCTCTCCTGACGTCTTAGAGATGAAGACCGCATATATGTCGA
TACCGGATGAACTTCCAGCCACTGTTAACACTTCCTAGTTAAATACTGTTGAAAATATGT
GCACGGAATAGATAATATTGGAGAAAACAAAAGGCTATTGAAAAAAAAAACATGTCAATT
GTCATAACATTTTAATGCCAGATCAAGTTTTACAATTGATTTCTGCTTCCTTTTTTCTTA
GTGAGGTGTAGTCTGAAAAAGGTTGCAGGTGCGTCCAACCATTTAAATTTCATGATACAG
GAGTGGATATTTGCATACGTACTTTTTATTCCTCTGACCTCACTAATGTTAGCTACCAAA
GCATCATGAATCACCCATCTTATATGCAGTGATCATGAGCGACACATTATTAAAGATATA
CAGACTAAAAGAAAAACAATGATGTCAGGACCAAAAGGAGAAGTCAAGGAACATTACTTG
AAACAAGGACACCGTGGTCTTTGTTATCATATACTATCACAGCCTTGAATCCGGCATCCT
GAGCATTTCTAACTTTATCATCAAATTGGCAGCCGCCTCTTAAAACCAATGCAAATGGTG
ATACAGGACCTTCGACTGCTTTCTTTGTCAGAGGACTGCAAGCATCAAGAGGTTCGACGG
TGTAAATTACACCGTTTAAACCTGAACCTTTCACTTCTGGAGCTGCAAAATGTTGAAATA
CCAATAAGTTCTTCTTCAACACATATAGATTGGGTAAAGCAGAACTTAGCTTTGCACATT
ATAAAGCATGTGCAAATTGCAAGAGGTAATAACATTATAAAGCATGTGCAAATTGCAAGA
GGCAATAACATTTTAAAGCGTTTGCAAAAATTGCCATAGAAGAGGTAATAAAAGCAGCAC
TGCCAAATACTCCCTCCGTAAACAAATATAAGAGTGTTTAGATCACTACTTTAGTTATCT
AAACGCTCTTATATTTCGTTACGGAGGGAGTACTAATCTAACTACCAGGATGCACGATAA
GCAATCAGTCCATTCATCGGTGATGACTCAAATTATGGATTCAGAATAATAAAAACAAAC
ATACAGTAATAACGAAACAAAATAGTAGTGAGTTGATAATTGATCGGCACTGAAACAGGG
GAGTATTGGTTGATTCGTAGCACTCACTAAATGTTGCCTCAACGTCACTGAACGATAAGG
TGGTATTATTCGCCATCAGCACCACACTGCAAGCTCCCGGCTGAGCCATGAGACAAACCA
CTGCACATAACCAGAGGGGAAATGATCTCCCTCCTCTTCTTGCACGGTTCATCTTGTCAG
AGTTTCGTCAAAAAATCTTGTCAGAGTTCCTTTCCTTTGGTGCAACTGAAGAGAAGAGCA
AACACCGACGCGCCAAATGAGAACTCTAAACCTGCGAGACACACACTCTCGCTCCAAAGC
ACCTATCCTCTACTAGCCCTGCAATAGCACTCCCAAAATTGAGCCATCAAGCCAAAAAAA
AAAAAAAACAGGAGCAGTGTAACTGTGCGGTAGCAGGGAACAATATCTATCTTTTATATA
TAGCATTCAAATGTAGCACGCAAACGAGAAACCTCTAAAATCGAGAAAAAAAATATGTTT
TCACGGGAGGACGCAACCTGGCCCCAAAGGCCAAATCCTCAGTAGACTCCAAAAACATGC
CGAGGAAGAAAGAATCCTACCAATCCGTAGCCGTGAAATCACCACCCAATAACTTGGAGA
GAAAAGCAATTCGGCCAAAGGATTGCACTTTTAGCTGGAATTGAGCTGAAAAGAAACTAA
TAGCGGCGGCATCCGGCGACTCGGCTATAAAAACTTTGCCAAATTTAGCCCGACTTTCGA
ATCTAATCTTTAAAAGGGCTGACGGATTATTCACCTGGAAACAGAGGAGACGAAGGGGGA
GAATCAGCGCGCGGTTACTGGGTGCGCGGCTGTGAGGAGACCAGAAGGCAGAGAGTCGAC
GCGGGGATGGAGACGTCGGCTGCCATGGGAGGGGCGGGGAGGGGGGGACCGGGCGGGGGA
TTACGCATAGGCGGCGAGACCGACGGCGAATCCACGGGGGGGAGGAGACAGGCGGAGGGG
ACGACGCGAAGTGGAGAGTGGGGAATTAAAGCCATCGTGACAAGAATCTGTCGCGTTGGG
GT