Contig Data
morexGenes
Links



Map Locations of contig_50566 (5258 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50566

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65714 1 1031 bp MLOC_65714.1 Available Available LOC_Os07g48550.1, FRAME:-3, EVALUE:8e-88, 13107.m05202 protein no apical meristem protein, putative, expressed





CDS Structure of MLOC_65714






Contig Sequence (5258 bp)

>contig_50566 5258 assembly3_WGSMorex_rbca.fasta
GTGGGGCCGGAGGTGGAGGTGAAGGGTGGGGCCGGAGGTGGAGGTGAAGGGCGGGGCCGG
AGGTGGAGATGAAGGGCGAGGCCGGAGGTGGAGGTGGAGGGCGGGGTCGGAGGTGGAGAT
GGAGGTGGAGGGCGGGTGCAGAGGTGGAGGGCGAAGGGAGGAGCGGAGGCGAAGGTGGAA
GAAGTTGACGAAGATTTAGAATACAGGCTGATTTAGAATTTGAACCGGGGGCATAATGTC
TATTTGTCCATTTTCACCTGGTTGGAAGATATTCCCCAACGACCTATAATACGGAACCGA
GGGAGTATGTGACTATGTGTGTGTGAATGTGATTACCATATTTGTTAAACAATTATGCCG
AACCATTGACATCATCGATCGAAAGAATAATGAATTAACCGAAGAAATCCAGTATTTGTT
AAGCAATTGTAAGTAGTAAAAAGTACATATAGTTTGATATCAAAAGTTAATGAAACAACT
GATCAATAGAAAAGGTAGCACCATCCAAATAACCATCTATATATAGCTACCAACAAATTA
AGACGCTCTAGTCCGGGTGATAGATATGGATGGATTCATCAGTCATCACATCTTCCACAT
GTAGTTTGGGCTCTACTGTTGCGGCGCCGGGGCGCCGGCAAAGTCTACGGCGCCTGACGG
GGAGTCCATGAGGATCGGCAGGTCGGCGTTGTTGAGCAAGTCATCACTGTTGAATATCTC
ATCGAGGAAGGCGAACGGGTCCTCCTCCTCCATGCCCCCATCGGCCGCCGGCGCCATCTG
GGGCGCATTGTTGGCCGCCGAGTCTTTGTTGAACAGCCGGCAAACAGCCCAATCGTCCTG
CAAACAGCCGGAAAACAACACGAGGAGAATAAGAAACAAGAAACAAATCTGGAGCGTGAC
ATGTGATGTGACTGTGAGCGCGTGGTCCAGCCAAAATCGATTCTTGCCGTACCTTGGCGG
AGCGGGGTAGGCGATGGGGCAGCTGGCCCTCGAGGCGGTATTCGTGCATCACCCACGACG
TCTTCTCGCCGCTGGGGGCGCGGCCAAGGTAGAAGACGAGCGTCTTCTTCATGCCGATGA
GGACGGCGCCCCGGCCCTTGCCGCGATAGATCTCCTTGTCCTTACCCGTCGCCTTCCAGT
AGCCGCTCCTAGTCGCCCGGTTGGTACGCGTCCCCGTCGGGTACTTCCGATCCTTGTGCA
CGAAGAAGAACCACTCCTTCTCCCCCATCTTCGCCAGGCCTGCAGAAAAACCAACTGGCC
ATGAGCGCCCTACCTCCCATACCTGCAAATTGTCGAGTACTATACTAGTAGTACTGCACT
TACTCGGGAGATCCCATGGCTCGGTGTTGTTGATGTTAACGTCGGGGACAACGAGAACGG
AGGAGTAGGAGTTGCTGATCTTGGGGGTGAGGTAGTACGTGACCACCTCCTCGTCGGTGG
GGTGGAACCGGAACCCTCGAGGAAGCACTAGCTGCGGCTCCTCCCCCCGCAGACCCATCA
CCGCCGTCACGTCCGACATCGCTGCCGCCTCTCGGATCTACTAGCTTACCTTGCTACGCT
GTGGAGGAACCAGATGAAACGGGGGTTGAGGAGGAGGAAGAAGAGCGAGAGATGTGAAGA
GGTTTTTGTCTCAACGTTTTGGGGTTTAGAAAAGCGGCGGGGTGGGCGTGGTTATATAGC
ATCCAGAATGCTGTACCACGCAGGCCTCACTTATTTACTGCACCTCCATAGTTTAGCTAA
TATTGATGGCTACTAATTCTTTGTAATGCTTTATAGTAATTCCAAGGAAATAAATTAATG
CTCTGCCAAGCGGCTAAGTATGTCCTAATGATTTGCTCATGATAGCATCCTGGATAACAA
CAGCCATGTGAAATGTTAAGAGGTTGCAAACATGATTTTAAATAGCGAATTAAATTGACG
CAATCGGGGCGATATCTTCGTTCGCAAACCGCCCCGCAATTTGAGTGGCATTGTGAATCG
CCGAAGATAGCGTCGATGAAGATAGCGCGGTGCCAAATTAATGCCGGATTATGAGCCGAA
AGTTTCGCTCCAATGCAGGGCTGCCGATAAATCCTTTATCTTCTGCAATTTTAATTTTTG
GTTGCCAATGATACAATTTCTGGATAACAACTGTGTAATAACCATGTCCTAATCTAATGA
TATAGTCCTCCTTCTGACCAAATAATTATTTCAGTGTTACTAATTTTATTTTATATGTTG
AGTACTACTACCTTGTATGAAAATATAAGACATACTAGTAGAAAACAGGGCTTTAATCCC
GGTTGCTAAGGACCTTTAGTCCCGGTTCATCAATCGGGACTAATAAGTTGGGATTAAAGC
CCTCCCTCCCCATTAGTCCCGGTTTGCCACACCCCAGGACTAATTCCATTCCACGTGACT
GGTAGAGCGCGCCGTGGGCGAGGCTCTTTAGTCCACTAACAGCTTCGGAGATTTGGGGTT
CATTGTTTATTTTTGCTTTTCATTTTCTGTTTTCCATTTAATTCTTTTTCATTTCAAACA
TAACTTATGCTACTATATACCGTACACATTATGTATATATCATAGATTTTCTCGTATGAC
CAATCATATATCATAGGATTTCTTGTATGACCATATATATATATGCATACACACATATAT
TTGGTATATACAATTTTTTCTACAACTTGCAGATCATTACACGCATGCATTAATTGGTGA
ACTGGCATTCTCCGTCGGGATCTATGACCTGCTCAAGCAAAAATCCCGCCATTTCCTCTT
GAATAGTATGCGGTCCTCTGGTAGGAGCCTCTGCCGCATCTCCGACATCTTTAAAGGAGA
CCAATATAAATATATTAGTTATGTGTATATATACTAGACCATGATAAAAAAATGAGAATA
GTATTTACATACCGAACGACGTGTGCTATCTCTGTGTCGTTCAGTCATAAAGCGAATGTT
CTCACAAACATGGAATAGTCCTCTATGCCTATTGCATGAATCACTTTACGGGAATAGAAT
TCAGTCAGATAATAATCAAGCATGATAANNNNNNNNAAACTAGAACTAAAGAGATGCACG
GATATAGCTAGTACTACTTAATAATGGTACTAAGGAGTCATTGATTACTTGATATCAAGA
AATGAACTAAAGAGGCCGACATAGTGTGATAAAGATTGAAATCACCTGTCGAGCATCAAC
TTCAGGTCCATGTACTCTTTACTGTCTTTTTTAGTGAGTTCAGTACTTCAACTTTTCCCT
CGTCAACACTAATGATTAGCAGTATCCAGTGGAAACTGCATTGTATAAGCGGGCATGCAT
AACTCATTAAATAACTACGTACACTTAAGTAAGGAAAATAGAATTTAGTTGTAAGGAAAT
ACTAGTTCTGATTGGGTATTTAGTACCTCCAAAAACCTATACAAGTTCTCCTCTGTTTCA
TCTTTGTGCTTTATTAACGTCTGACCACAAATGGTATTTTGGGTCAATGAATCCAATGTC
AAAGACTCCATCTCTTTTCATTTCAAACATCTTCATTCTGCATAACACCACACAAAAGAA
TATAGTGAGGATAATTAGAGGCAAATGAACGACCTGATGAGCTAGAGACTTAAATTACAG
AAAGAACTCACTTACAGACAATAGCAAGTGACGAGAGATTTGTCGAGTGCATCTTGATTG
TATATCTGAAAAATTCTTCATTTTCAATCCACAAATCTTTTGCATTGAAGTAATGCTATG
GCTTGACTTTCGCCATGAGGCTCTCGCGACTGAGTTTTACTTCCCTCATGTACCAAGTAT
GCAATTTGTACATTTGCGTTCGTAGCTGCCAGACGTCCTCAGGCCTCACTAGAGGTTGCT
TGGTGACAAATTTCCATGCTAGTTGACCCTCTTTCACCCTAGGCTTTACTCGTCGCCCAT
CGTGCCCACCGGTACTCACCTTGAGCGGCGGAATCGATTGCACTACTTGTTCTCCCAGTC
GGGGAACGGTTTTCCTGCTTTTCACACTACCGCTCGAGTCCTTCTTTCGCTGTTTATGAT
ATGACTTGCTAATAGAGCGCTCATAGTCTGATCGACTTCTCTCCGGAGGCGGATTAGCAA
GATTGTCCAGAACGCGTCGTACGTTTCCAGAGCTACTATCTCCTTTGAAGGCGGGGGAGG
TTTCAGTCCAAAATGGGCCTTCAATTCAGAAGCCACTTGGGCGTCTCTTTCCCGAGTGCT
CTTCTAGTAAGCCAACTTATTTTTGGTAGGAGGGGATGGTTTCTTCCTTGGTGATCTCTT
CCGCTTTGGACTTTGTTTCCTCACCAGAAAATGAAATGACCGCGTACTCGCCCTGGGCTC
TGTCTCGGGGTGGTGGGGTGGAGTCGGCTGACGCGGTGGCGGACTCGCGCTGGGCTCCAT
GTTATGGTGGGATGGAGTCGGCTGACGCAGTGGCGGACTAGCGTTGCGCTCCATGTCGGG
GTGGTGGGGTGGAGTCGGCTCATGTGGCAGACTTGGAGGAGGAGTCGGTGGCCNNNNNNN
NNNNNNGCAGTCCTTTCTCCATAAGCAGAGATCACATAAGACTTCTTGTAGTGTCTATTG
CCCTTCACCTCCAGGAATGTTGAGATCTAGTGACTGATATCCCGGCATCACTTCATCCAC
CCCGACATGAGCTTAGCCAGCTGGAATCAGATTGGAATGGAAGGTTGCATCNNGGGGATT
TGTTAAAGCATAGTCGTCCGCTACCTTCATGGATACATTCTTGAGTTTCATGTGTAGCTC
ACAACAATTGGCCACTGTGATTTCATCCATAGGGTAACGAGCCAGCAATGCATCATTGGC
AAGGACCCCCGTGGAACCCATGCTGCTTTTCAGCTTCGATGGAACGGTGCTATCCAATGC
TGGATCTGATTGCTCCAGCCGTTGAGACGCCCTTTGATGGTTAAGTGTGTTGATCTGCTC
AAATTTGCATTCCAAATCCTCAAGCCGGTTAGCATCCTGTTGGGGAACATTACATGAAAA
ACAAAAATTTTCCTACGCGCACACAAGATCAATCCATGGGGATGACCATCTATGAGAGGA
GAGAGTGCATCTANNNNNNNNNNNNNATCGCTAAGCGGAAGCGCATATAATGTGTTTGAT
GTAGTCGTACGTCTTCACAGTCCAATCACGATCCATCCCGCGATCCCATCACGATATATC
CCGCGATCTCATCATGATCCTTCCCGATCTAGTGCCAAANNNNNNNNNNNNNNNNNNNNN
NNNNACGTACAACTCGATGACGATCTCCCCATTCTTGA