Map Locations of contig_50533 (3705 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50533

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65693 4 2401 bp AK366655 Available Available None





CDS Structure of MLOC_65693






Contig Sequence (3705 bp)

>contig_50533 3705 assembly3_WGSMorex_rbca.fasta
TTTTAAGAGATTTCACTAGATAACTACATACGAAGCAAAATGANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTACATCCGTATGTAGTCCTCTAGTAGAATCCCTAGAAAGACTTATATT
TAGGAACGGAGGGAGTAGATTTCTAGATTAATGTTGTGATGATTCGTCTGCTTTTTAATA
GCTTTCAAGAGTTCTGCATCGAGTCCCCAGGACCACAAGACTCTCTTTTCCAGAAAAATG
GAAAGAAAAGCTTTCAGTTAAATCAGTTATATGCATGTTTTCCAAATCACGGAGACAGGA
AATAACTTGCTCAAACATAGTTTGAACTGAATGATAATTTACAACAGACCCATTCCCCAG
CGGATGCAATGGAAATGTTTTTTCGTTCAGTTCAGTACAACTGATCAATCTTTTGTATCT
GCATTCAAATATTAGTTGCTCAGGCAATGTTCTAAAGTTACTTCTGCTACAAAGCGGATT
GCTGGAGACAAAATAGTCAGAATGAATCAAGAAGAATCAGCCGATCTGAATCAGCTGTCC
ATATGATGATATGAAGCACATCAAACCTTTACAAAAGAATCAGTACAGTTTGCTAAATTC
AGTCTCAGGTGCAGGGTCACCAAGCCGGGGGAAGTGCGGATCCCTCTCAAGCATTGTTTG
CAATGAGTCCATCACCCTCACCATGGATGCCCACAGGAATGGTGCAGAGCAGAACGCATA
GGCGACGACTACCAGAATCCTCGCAATACCGTCATGGTACCAAGGGAATGCCATGACAAA
GAGCATTCCAACAATCCCAAGCCATGCTGTGAGCACGGCAAGCGGTGGGAGCAGGAATGC
ATTGATCACGACCATTGAGAAGGCGAGGACACCAAACAGGTACATGGACCAACCCATGAT
TGGATGAATTGTGCATGGGATTACGAAGAACGGGATCGTATAAGCAGCCATCATGGCCAC
AAACCCGGCCAGCTTGATTAGCCACTGCACCAGGGCACCTTGTTTCTCAGGTCGCCGATT
ATAGCACAGTTTTGTCATCTGTGGCCTTGCCAGTCTGGTGAGCGCTATGATCCCTATGTA
CATTAGCAGCTCCATGAGGACCACCGGAATTTCAGCAGCATAACTGTGAAATGTGGACCA
GGGAAGGAATGTTAGTAGGCAGAAATTAAATGCACAGAATGCATGCCATATGATTTCTTT
CCTATCTGCTCAAGTATATATTCTGGTCATAAATTGTTGCTTTCACTCACCCAAGGTCAT
CCCAGCGTTGCTTGTGCCAGGAAAGGCCCAGTGGCAAGATTGGCCAGGACCACCAGTACC
AGGGTTTAAACCAAGGGGCACTGGGGAATGTGATCACGCTGTTAGGCCCACATGGAACAT
GCCAATGCAGTTTAAGATCTGCAATATTTCAGTCAAATGTCGGTAAATATCTTTGGAAGC
AAGAACCATACGAAGGTTAGAGAATGGAGATGAACGGCAGAGATGCTCACAGTAGTATGA
TGCGTCCATCTGATAGCCGAGAGGAAGGCGATATGTTCCGTTGAGTTTGGTGCCATTTTC
AGGAGGATGGAACAATGGTTTGTCCAGCAAGTCCGGGAAGCAGCCGACTAGAAAGCCTTG
GTCTGCACCGTCAGAGTTGTCACGACCAATCTCCAGGTCATGAAGCATGCCATTAAACAC
ATCCCTAGAAGGCTGTAGATTGGATAAAAACGCCAATGTCAGATGCTTTTTGAAGACAAA
AGTTATCTGCGTGAAAGATATCTTCAGGTGCATTAGCTGTGGTCAAGGCAAATGATATAC
CTTCCGATCTGAAACTAGATAGGCAATTATTTAAGAAAAATCTTCTGACTGTGTGTTTGT
GGTGGTTTAGTGGAGCTATCATGCCAACCTATCAATAGTCCCACCTATCAATAGTTGCTC
ATCTGGCTTATGCCACTACGTACCATCATCAACAGAGGTAGCGATATGACTCAGTTTAGG
AACTGTACTATCATCAGCATACTAAAGGACACGATCTAGTTCAACACAGATCGTTACATG
ATCAGCTCAACAGGCCCATAACATTTCAAGTAGAAGAAGAATTTGACATTTGGTACAGGC
GGTACAAATTGCAAGGTACAAACCAGAAGAACTGGGACCATACCTGGAGCACGAAAAGGC
CTGTGTGGAAGTAGCATGGATTGATGAAAACAGCACAGAACTGGCCACACTGGAAGAGCT
CATCGGTGTTCTGGAGGAAGATGTTGTCGGAGTCGATCATGACGACACGCTCGTATTCAA
CCAAGCTCCATGCGTAGAGCTTGTTCAGTGTCAGCTTAAACCTCCTGTTCATTCCTCCAA
GGTTGCCCTCGTAAGGATTCTTCAGGTTCTCGACAACCACCACCCTCATGCCATCCTCCT
CCCTCCTGTTCCCGTTCACCACCATCACAAAATGTCATATTTCAGTTCAGACTGGGAACG
GAATGCATATCTTTGTTCGCGTTGCATTTCCTTTCTTTTCTGAAATGAATTAGCTATGAT
TTGGGCGCGGCCATGGTTCAAACCAATCATTTCGGCTTTGACCATATCCAAAACATATAC
TCCTACTGTATTTTGAAATCAATTTAATTAAGAGGAAGGAAAGTTGACCACTCAAACTGG
AAACCAACCGATTTCTTATAAGAGAAGCCACCAAACAAATACTCCTACTCGTCAAAGCTC
ACAGCATGTACTCACATAATACAGCATATTCTCTGAGAGTGGTAACATAGTGCTACTAAT
CAAGAGCACACAACGGTGATGTGTCAGTCAAGAACATTTACTTGAGCAGACTTATGGTAA
ACAGCATGGAGACTTCAGACTTACTCCCTCCGTTCCTAAATATAAGTCTTTCTAGAAATT
CTACTAGAGGACTACATATGGATGTATATAGACATAATTTAGAGTGTAGATTCATACATT
TTGCTTCGTATGTAGTCACCTAGTGAAATCTTTTTAAAAACTTATATTTAGGAACGGAGT
GAGTACGTAAGTAAAATACTAGATACTCCAGAAGCTTCCTAGTCCTATCTGTAGGTGGGC
CAGGGGCCAGGACCCGCCCCCGCAAGGCCATCGTGCGGACAAATTACTTGCCAAAAACAA
CCCCTCGTCTTCGCCTTCGTCCTCACCCACACAAGGAAAGAAACGTTTGCCATTGACGAA
AAAGAAAAGGAAAGAAACGCTTGCTTATAATTTAATGATCAAAATTAACTGCAACGCGTC
AACGATGGAGCTCGAATCCGTTTCTCCTCGCGACCAACCGCGCCCAAATGTAAGCATAAG
CGGCGGAAGAGTCCAAGGGAGGGAGGGAGGGAGGGAGGGGAGGGGCGGGGGCGTGCACTC
ACATTGCGCGGACCCAGTCGCGGGGCACATCGGAGGAGGCGATGAGGACGCGGTCGGCGT
CGGCGCCGACCCTGGAGAGGGAGCGCATCATCACGCGCACCGCCACGTAGAACTCGTAGT
CCCGCGGCGTCCCCATGTACATCATCGCCGCGTACGCGTGCCGGTGGCGCCCCTGCCCCT
GCCGCACGGCCACCCCCCTCTGCCCGTGCTCCTCCGCCGCCGCCCCCGCCAACGAGGCCG
ACGCCGACGCGACGACCAGCCACAGAACCGCCGCCCCCACGGCCACCCCCGCGGCGCGGG
GCCGGGCCACAGGCGCCCCCGGCCGGGGCGGCGCCGCCCACCCCG