Map Locations of contig_50515 (3865 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_50515

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65683 2 1083 bp AK376447 Available Available None





CDS Structure of MLOC_65683






Contig Sequence (3865 bp)

>contig_50515 3865 assembly3_WGSMorex_rbca.fasta
TCACAATGGATGATCGGACGTTTTCCCGTAGAAGCCCCCTCAATGCAACCGGAAGCAATT
GCATCATAATCANNNNNNNNTCATGAGACTTTAGGTTCTGAATTTTTCTCTCTGGCATAT
TTAATATTCCCTTTATATTCGACGAGTAGCCAGACGGGACCTTCATACTGAGCAGGCATT
CAAAGAAGATTTCCTTCTCTTTTTTGGTAAGATTGTAGCTGGGAGGACCTTCATACTGCT
TTAGATACATGTCCTCTTTTTCGTGCATACGTTGCTAGTCCTCTCGTGCCTCTGCTGTAT
CTTTTGTCTTCCCATACACGCCCAAGAGCTTAGCAGGTTCACACAAACATTCTTCGTCCC
GTGCATCACGTCGATTGCAGAGCGGACCTCTAGGTATGTCCAATAAGGTAGATCCCAATA
TATATATATTTTTTTTTTCTTCCACATGGGTGCGTGTCCGTCAGCGTCATTCGAAACACA
TTGTCCGCGAGGACCCTTTCCAAAGATTACTTTTAAATCCTTGACCATATGAAGTATACG
ATCACCAGTACGGTAGCCAGGCTTCTTCCGGTGATCTGCCTCACCTTTGAAATGCTTGTC
TTCTTTTCTTAAGAGATGCTTGATCGGAAGAAATCGACGATGTCCCAGGTGCACATTCTT
CTTACATTTATCCAAATATATACTCTCGATATCATCTAAACAGTGCGTGTATGTGTGGTA
TCCCTTGTTTGTCTCTCCTGAAAGGTTAGTAAGAACAGGGCAGTCATTGATGGTTACAGA
CAGCAACGCTCGTAGGTCAAATTCCTGCTGTTTGTGCTCATCTCACACACGTACATCTTT
TCTATCCCACAGTTAGTCTGGTTTTGTAGTCATACTACTCCTTTGTCGTTGATGTTGTGA
TCCAACACGATGCATAAGTTGGACTGGACGCAACGACTATCATGAAGACTAAGCAACTAA
GTTTGGACTTTGCATGAAATCTCTTACCAACTAAGTTTGGCGATAAAGTTGCCGAATGCA
TAGAAAAAACTCTTTTAGCATTAGATCTTCAAGCTTTTGACAACCTTCAATCCATGACTT
TATTTATCATATAACTATAAACGGTAAAACCATCATCATCCCCGACTTTATTTCTCATAT
CATTGTAAACCATACGACAATCATGTGAGGAATAAAGTCTTCTTATTGTCAACATGAAAG
AAAAACTCTACAAGGAGAGTCCAAAAGTGTATATAACTAGGTAATTGTCCGTTGTGTTGC
AACATGGACATGCATATTCTAATGGGTCAACACTAATTATGTGTGCCATAGATCTTACGT
CCATAATATTCTAGATTTTGATAAGATTTGATTTGATTTGGGTATTTGTAGGGGAAGTCA
AGAAAGTTAAGATTTCTTTTGATTTAATTACTCCAGTGTTTAGATACATTTGTATCTAGA
CAAATCTAAGACGAGTAGTAATATGAATTGTAGGGAGTAATGTTTTGACAAGATTTGATT
TTTTGGGCATGGGTAGGAGAATAGAAGGAAAGTTTTGATTCGATGAGGGTTTGATAAGAT
TTTGTTTGATTTGATTGATTGAGTTATTGCAGGATGCGAGAATGGCGAATCGAGGGGAGG
GATAGTTGGAGGACGTACCATCCCAACTCCTTTTTAATGGTAGAACATAATTAGTGACTA
TTTTCACAGAACTGTGGGACCCATCAGTAATAGAAATAGGGTGCTGCTTTAATTAAGAAT
CTTTGTCACAAAAACCCATCAAATGCCTGGTTTGGGATGTTGGGGTTCCTTGTGGCTGAA
GAGGAGCTCCAGTCCAGTGCACCGCGTCCAAATCCATCCGTCCAAAACGGAAAGAAAGCA
ACGCTCGAACGTGATCCTGCCTGCACAAAACGGAAAGAAACGAACGCGGGAAGGCCAAGA
AGGGCAAGCGCGGAGCAAATCGGGTGGAGAAATCCTTTGCATTGACAGCGAGTAAATGCG
CCGGAGCTGTACGTAGAGGGGCAGGCAGCTGAGCCTGCCTGGAGTCTGCCACCCTGCTTC
TGCAATTCTGTTTCTCCTCCTCCTCCTCCTCCTCTCTGGCAAGTGGCACGGCAACGCCTT
CTTCAGACTCTGCCTGTATATATAAGAGAGCCGGCAGAGGCGCGGCAGGCAAGGGATTCG
TCTACTTCTCTCTCGCCGGCGCCGCCGTTAGGGCGTCAGGAAGATCAACCTCGTCGCCGT
CGCGTCTGCTTCGGATAATCTCTTCGTCCCCTGCCCCGTCCGGTATGATATCTCTATGTC
ATGATCTACCCCTATTCACTCCTTCCATGTCCTTCTCCTTGCCATTCGTTTTCTCTGGAT
TTCCCACGATTTTGTCCGTGCGGTGGCTCTGGTTCATACGAAATCGCCCTTGCGAATTCC
GGTTTGCCTAGTGTTTTGAGTCTTGAGTTTTGACCACCCCAATAATCCCCCCTGTATCCA
GGAGGATCTGTGCTAGATCATCAGCCTAATTAAAACTCCTTCGTGCCTTCATGCTCTCGT
GAATTCTTCGAAACTGATCAGATCCGCCACCACACTAAACCCTTCATGTTTCGGCAGTTT
GGCAGGTAGTTGTGGTGCTGGTTGAAGGCGAGGCGAGATCATGTCAGCGGAAGCCGCCGA
TGGCGCGGACACACAGCTGGCGCGGCACGACTCGCTCTACGGTGACGCGGAGAAGGTCGC
CGGCGACAGGCGCCACGGCTCCGGGGTCAGCGATCGATCAAATCATTCATCACCTTGCTG
ACTTTTTATTTATCCGGCTGCTGTGCTGTGTGCTATGTGTGTCTGACTATCTGCATGGAT
GCATGCATGCAGGCAAGCTGGCGGCACACGGTGCTGCTGGCGTTCCAGAGCGTGGGGGTG
GTGTACGGCGACATCGGGACGTCGCCGCTCTACACCATCTCGAGCACCTTCCCGGACGGC
ATCCGGCACCCGGACGACCTCCTCGGCGTGCTCTCCCTCGTCCTCTACACCCTCCTCCTG
CTGCCCATGGTCAAGTACGTCTTCATCGTGCTCTACGCCAACGACAACGGCGACGGCGGC
ACCTTCGCGCTCTACTCGCTCATCTCGCGCTACGCCAAGATCAGGATGATCCCCAACCAC
CAGGCCGAGGACGCCGCCGTCTCCAACTACACGACCGCCCATGAGCCCAGCTCGCAGGCC
AGGAGGGCGCAGTGGGTGAAGAAGATGCTCGAGTCCAGCAACGCCGCCAAGATCGCGCTC
TTCACCATCACCATCCTCGGCACCTCCATGGTCATGGGCGACGGCACCCTCACACCCGCC
ATCTCCGGTACGAACGTATATTGAGCATTTATACTAAGCTTATATAGATTGATCTGATGT
TTGATGGCCGTGTTGTTGCAGTGCTCTCTGCGGTGAGCGGGATCAGGGAGAAGGCCCCTC
ACTTGACCCAATGTACGTACAAATATTCAGCCAGGAAACTTCTGAATCTGATTAATTGTC
AAGAGATTTTAGCTTGTTGATCTACAGCCAGGGAACTTCTGAATGTGATTGATTCTGAAT
GTGGTTTGTTTTACGTAAAAACAGCGCAGGTGGTGTGGATCTCTGTGGCCATCCTGTTCC
TGCTCTTCTCGGTGCAGCGCTTCGGCACGGACAAGGTGGGCTACTCCTTCGCGCCCATCA
TCTCGGTATGGTTCGTCCTCATCGCCGGCATCGGGGCGTACAACCTCGCCGCACACGACG
CCACCGTCCTCAGGGCCCTCAACCCAAGGTACATGGTGGACTACTTCCGACGGAACGGCA
AGCAGGCGTGGCTCTCTCTCGGGGGCGTCGTCCTCTGCACCACAGGCACCGAGGCCATGT
TTGCTGATCTTGGCCACTTCAACAT