Contig Data
morexGenes
Links



Map Locations of contig_50507 (4955 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50507

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65674 2 1172 bp MLOC_65674.2 Available Available LOC_Os03g50160.1, FRAME:-1, EVALUE:3e-40, 13103.m05456 protein plastocyanin-like domain containing protein, putative, expressed





CDS Structure of MLOC_65674






Contig Sequence (4955 bp)

>contig_50507 4955 assembly3_WGSMorex_rbca.fasta
CCATCAGCCAGCAGACGACAAAGCCCTGGCTGATGGCAAATTACTGTTTTCCAGTAGTGC
ATGGTCGTGCTTCTAGGAATATGGAAAAAATCACATTTTATTTTTCCCCTTTCGTGAGAG
AAACGGATTTGCTTCTGGTGAAGGCATACATTTTCCTATTGGAATGAAAAAACAAACGTG
TTTCCAATTTAGTTTTTTCCGTTTTTTTTTTGGGAAAACTAATTCGGCAAAACCTATGAA
TATGGGATCTAGTTCTGAATATCTTGACACGAGGAATCCAACGACGAAAAAGGTTTAAAA
TTTAGACACGGGATTTAAGAGATAAAAACATTAAAAAAAATCTACGTAAAATAGAAAAGT
CTTAGGTTACGACAAGTGGCGCATATGCAGTGTGACATTTGTCACAACCTCGGATGGTGG
TACTTACCCTTGCAAAGAATGCTCTTTAACTAGTGATTTTGTCATTATAATGTACATATT
GGTTGAGACACGGCTATATTATTTGTTCAGGGTGGCTTCTTTGGGTTGTTTCTGTAATTG
TTGTAGTGTGCGCGAGTGTAGAGTGTGGAGTGCCAATTGACTTGTTGTTGGCAGCAAGTT
GTAGTCTTTTGTACTTGGTCTTCTATATTCTATAAAAAAATGGTACATCTAAGCATACTC
TCAAAAAACATTTACGCCCCTTAAAATAATATTTTTACATTTACGGTTTTTTGGGGCGCT
TGGTAAATAAGCATTATACATAATATTGCAATGACCATCCATTCTAAAGACAAAAATATT
TTGATTGAACCATTATCAGGTGTTGATTGAGAATAAGTATTTCCAAGTCAATTAAGTGTT
ATCACCACTATGTAATAATTAAAGAATATAAGTACATTCATATTACTTCATTATAGTGAA
GACTAATATCAAAAGTATTTAGTCTACCAATTAAAAAGATGTAATCAACCTAGGGACACC
GGGAGACCAATACAATTAGGCCAGCTAGCTTCAATGTGGTGCAACAGTCCAAGTTCGTTT
CTTGGGATGTGGCGTCCCCATTGTAGTGACGACGTCCGAGAGGTCACGTCCGTCAGTCCC
GCTGTCCTGTCATCCGGTAAAGTGATAGGTATCAATGTGATGCATGCTTTGGGTCGACAA
GAATATGGCGTGGGAAGGGACACATGCGTTCGATCGAAAGAATGAGAGAGGCGGGTGGGA
TTTTTTGGTCGGCCAGGCTAGTCAGAAGCGGACATGGCAGCGGTCGGGACGCCCGATCCC
TCCCCTCCTTTCTTCGGTTTGTGGGAAAAAGCTTATTTAGACCGTCAAGCGGACCGATAC
AGACCCACGTTGGATGGCTTCTAGGGTCCGGACCGCGTGGCTCGGACGTATGTAGGCGGT
TTGAGAGTTAACGTTGTAGATGCCCTTAGGGCCATAGAGGACCCTTGTTGACGTGAGGGC
TCTTGCTCCTCTTTTTTGTAGTTTTTTGTGTGCCCGGTTAGGGTTTGTATCCTCATTAGG
AAGGCAAGGTTAGGGTTTGTATCGTCATCAACAAGGCAAAGCAACAACGACCGGTGGAAT
AAGGCCATGCCCGTGTAGCCCCTATCCTCGTGGTGCGTCTAGCATTGTCAAAAGACGTAT
AGATGTGTGTCTTTGACGTATCTTGCGAGATTCTGTCGTTTCTTGTTTGGATGGGTATCC
TTGGATCCGATCTTCGTTCATTTATGTTTGTGTGTCTACATATTGAATTCTTTCGATCTA
TGCTTATCTTTGACGGTACAGTTTTGTGCCTTAGTACGACAAGGTTTGTCTGGTTTCAAC
AAGGGAGGGGCTATGATGACGGCGTGATTCGACTTGATCTTTGCTTAGTGGTCTTCGGGC
GTGGATGTAATCTTTGTTACTTGGCGCTGTTTGTAATGTTTTGACAATGGTTGTTGAATA
GGTCAGAAGTTTTAGGAGAAAAAAAAAACAATTCCCATACATTTGCACCGTATTTGAGTA
TCACACAGTAACTCAAAACTCTGGTACAATACAAGCATGAAAGCATAGACAACCGGAACA
ACACAACCGTATCGCTCTCATTATTACATTGCTCACGTGCACACATAACACACACGAGTA
TATTGCTCACGGCCAGACGGCCTAACACCCACGAACTCGTGAGTAACTCGTGAGTCCAGA
CGCGGCATCATGTAGTAAAATTTCAGTCACGCGAAGGAAGGAAAGTAAACCAAACTTAAT
AAGCGCCGGCGGATCATGCGGCGGTGACGGCCATCTTCATGCCGGCCTGGCAGTGACCGG
GGACGCTGCAGATGAAGTAGTTGGTGCCGCGGGAGAGCGTGACGCGGTCGCTGCCGGAGT
TGTACGTCCTGCTGCCCCTCGCCGCGCTGCACGACTTGTACCCCGCCGCGTTCACCGCCA
CCACGTTGTGCGCCCCACGCCCGTACTTGAACACTGCACGCATGTACAAACACCATGCCA
CCGTCAGTAAACCGAGCCAACATGTTACTGTGGTACGAAATGCACAGCAGGGCTGCAGAA
GCAATCAATCCTTGGGTGAACTTGTCACTATTTACTGCGGAAATATACACACGGCCGGTG
GTGCGCGCAGAGAAAAGTCCCTCTCTTTTAACAGCAGTGGAGCACTGAGGCCGGCGTGCA
TGCGTCTCTTCATGGCAGCGACAGCGACACAGGAAACATGCACGACCCACAGTACACGAC
GTACTACCACTACTCTACCCGTCTACCGAGGCCAACGGTAGCCTAGCTAGCTATGTAGCG
TAGTACGTAGGAGATGAGAGTGAAGCAAAATTATCGTGCAAGCTGGAAGAAAGTGATTAA
TCGCGGCACCGGACGCATGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGAGCACTCAC
GCAGCACGTCGCCGGCGCGGAAGCGCTTGCCCCTGGGCCAGCCGCCGGAGCTGACTGCCC
AGCCGACGGTGTACACCTTGGACTCGGCGAACTCGCCGTGGAGGAGCACGCAGAGGAGGA
CCAGCGCCAGCACGGCGGTCGCACTGCCGCCGCTTCCCTGAGCCATGGCTAGCTGATGCT
CGACTGCAAGAGCTCGGGAATGGAAGTGCAGGAGAGGAAGTGAAGACTAGGAGTGAGTGG
TGAGTGGAGGCTTGGGTGGTGGTGCTGGTGTGGTGCTGGGAGCCGAGTTTTATAGGCGTC
CGTGGCCGCCGTGCCAGCGCATGGCGAAGACTGAAAGGCCAAGAGCGTGGCTAGGCTACC
ACCACACGCGTTGCCACACCGGCGCGGCGCGTGTGAACGTCGAGCCACTGTGGTGGTGCC
CTGCCGGTGAGAGTCCAACGGGAGAGCCCACACCACACCGGCCAGCTTAACTTCCTAGTA
CCAGCTTGGAAAGTTGGTGGTCGTAGAGGAATTTACTTCGGTTGAAACCGGCCAACCACC
CAAACATGGGGGGTGGCCATGCCTTCGGATTACATGCATTTGGGTTACTAGCAGCCAGCA
GGGGTGATGGATCGTGAGGTTAGTCAAGGGAGCATGGAAAGCGGCGAGTGAACGCTGCTG
CCGAATGCTTGATCGACGGTAAAGGAAAGGAGAACGGGGACCCGGTCGACGGGGAGCTAG
CTAGCTAGAGGACGCCGGGCTGTTTCGCTGTCTGTCGGAGGCCCTCCGGTACGTTTCCAC
TTGGATCATGCGTGCGTCCTTCGAGTTAGGTCAAGTGGATTCGGTGAGACAGTGAGTTGA
AACGGAAGGGGAGGAGGCCAATCATGCTTGATCTCAGGGTTCAACGTACACGACACACTT
GCTGCATGCAGTTGTGGCAGTGGCGGACCCAAGATCAAAGTTTAGAGGGGGCAAAGATGT
GGTAAATGAAGAAATGTTTCTTTGCTAAGTGGGGGCAAATCACTATCTAGCTTGGCATAT
TAAAAGGGTGCTGAAAATTTAGTGGGGGCAGCTGCCCCCATGGCTTATACACTGAATTCC
CCCCTGAGTTGTGGTACTACTGGTACTTGATTTATGTTCAAGCTCCCCTAAAAATGGATT
TACATTCAAGCTCCCCTAAAAATGGATTTATGTAGTGCTCCCTCCGCTCCATAGCGTAGT
GCATATAAACTAAAAAAATAATAATCAAATCACATAATTTTTTATCAACTTCATAGAGAA
CATATATCATTTTATACATCATAAAATATAGTTTCATATTTTATATGTTTTATATTGTAT
ATATACATATTTTTCTTCGTAACCTTCATCAAAATTTCACTACAACATGTTTTTCTCGCA
CTTCAGCATCGGATTCGTCGAAGGAGCATCTAACGCTCGAGTCCTCAATTCCTCCTCAAA
CGCTCGGACAGGTCGTCCGGCCACTGTCCGGTCACAAAAAGTCGATCCAGATGGGCCTCT
CAAACCGTCCTCAAACGCCCGGGCTGACCGGCACCCCTCATTTCCAGCCCAAATATGTGG
CGGATATAAGGGAGCCCGGGCACGCCCGACTAGCCCACACTGGCCCGCATCGATCTCACA
TATATTCGTCCTCATCCGTTGGTCGGACCAAACCCTAGCCACTTTACTTCCCTCCTCTGC
ACTCCCATCCGTTACCCAAGCTCACCTCCGGCGATCTCCGGCATGGCCTCCGACGGATCC
GACTCCGACCAGTACGAATCCGTCGACTGGGGGGTCGTCTCGTGCGAAGTGGAGGAGGCA
ATGGTGGTTCGCATTGCACCGAGCCGCCCCCGTGAGGATAGCGCCCGGCCGACGGGAGGA
TCTGTCTGTCGCGGCTCCATAACGTCCGCTCAAAGGGCGCTCAGTTCCTCTAGGGCGGAA
TCATCCATGTCCCGACAGGCAAATCCATTGTCCGGAACCGCGGACTTCGAGTCCCACCGG
GAACGGGCTGCCTGTTGTGGGAAGGAGAGGATAAGGATCGCTGAGGCCTATCTCGCAAAG
GAAATAGCGGAGACGGAAGGCGGCTGATGTGGCGG