Contig Data
morexGenes
Links



Map Locations of contig_50400 (7126 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50400

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65602 2 674 bp MLOC_65602.1 Available Available None





CDS Structure of MLOC_65602






Contig Sequence (7126 bp)

>contig_50400 7126 assembly3_WGSMorex_rbca.fasta
AAGACCCTCATATCTTAAAATTCAAGGAGAACCACTCCAATTCCTTGAACGAATTCAAGG
AGATATTTGTGGTCCTATCCAACCATTATGTGGACCTTTTAGGTATTTCATGGTTCTAAT
AAATGCATCTACACAATGGTCTCATGTGTGTTTACTATCTACACAAAACCATGCATTTGC
AAAAATAACGAGACAAGTTATCAAATTGCAAGCTCATTATCCCGAGAATTGAATTAAATC
AATTCGACTCGACAACGTTATTGAATTCTCCTCTCATGCCTTTAGTGATTATTGCACGGC
ATTAGGCATTGAAGTTCAACACTCAGTCCCATATGTCCACACTCAAAATGGATTGGCCGA
ATCTCTAATTAAGAGAATTAAGTTCATTGCACGACCCTTACTAATGAATTGCAATTTACC
AACTTCTTGTTGGGGTCATGCAGTTTTACACGCTGCTGACTTAATCCAATTGGGACCAAC
TGGATATCACAGCACTTCCCCTCTGCAATTAGTACATGGAAATCAACCAAATATTTCCCA
TTTGCGTAAATTCGGATGCGCCACATATGTCCCAATCTCACCACCACAACGTACATCCAT
GGGCCCACACAGGAAATTGGGGATCTATGTGGGGTACAACTCACCGTCGATAATCAAGTA
CCTTGAACCCCTCACGGGGGATCTGTTCACAGTCCGCCACGCTGACTGCATCTTCAACGA
GGACCATTCCCGACATTAGGGGGAGACATCAAGTACCAAAAAGAATGCCCGGAAGTCAAT
TGGAATGCCCAATGCATTTCCTCCTCTGATCCACGTACTNNNGAAACTGAACTTCAAGTT
CGGAAAATAATTAATTTGCAACATATTGCAAATAACTTGCGAGATTCATTTACTGACTAT
AAAGGTGTTACCAAATCCTACAATCCTGCCAAAAACGTGCCCGGAAGAGTAGATGTACCA
AGAAAACCTACGCAACCCCCTGTTCAAAGGAAGAGGGGGGAAGTATGGTCACGGAATAGG
ATTCAACTCCTCACAAGCAACAAAGGAAAGAGAAAAAGAAACCCTCCGAACCAGTAAATG
AAAATCAACCTATTTTTGATAATCATCAAATGGGTAATATACACCCAATGGGGGGGGGGA
CAACCCCCACAACCCAGTTCAGTTGTACACTCAATGACTGGGACATCGGAAAACCCAGAC
TCAATCTATTGGGAAATCACGACCAGTCAACATGGGCAAATGAAATTTCCACAAACTATA
TGGATTCTGGAGAATGTTACAATCGTAAGTCTACAACTGTCGACATATATTTCTCAACTA
CAGTTGCAGACAACCTTCTAAATGATCATCATCCAAAGACCAAGGGAGAGTGCAAGAAAC
GCTCCGACTGGCCTAAATGGAAGGACGCAAACCAAGTAGAGTTAGCCTCGCTCAATAAAC
GAAAGGTATTCACTGAAGCAATACCTACACCTCCCAGAGTTTTCCCTGTGGGATTGAAAT
GGGTTTTCGTCCGTAAAAGAAACGAGAACAACAAGGTGGTGAGATATAAAGCAAGGCTTG
TAGCCCAAGGTTTCACGCATAGACCAGGGATTGATTTCAATGAAACATACTCTCCACTAA
TGAGTGGTATTACTTTCCAATACCATATTTCTATGGCAGTACAAAATCGTCTATCTATGC
AGTTGATGGACGTAGTGACCGCTTACCTTTACGGTTCACTTGTTTTGGACATATACATGA
AGGTTCCTGATGGAGTCCCAATCCCGAATCCAAACGCAAAATGCAACACATATTGTGTAA
AACTAAACAAGTCTTTATACGACTTAAAACAGTCCGGTTGCATGTGGTACAACCGACTTA
GTGAGTTCTTTTTGAAAAGAGGATACTCCAATAATGATGATTGCCCATGTGTTTTCATAA
AAAAGTCCGCATCCGGATTTTGCATTATTTCAGTGTATGTTGATGATCTTAACATCATTG
GAACCACAAAAGATATTGATGAAGCACACAATAACTTAAAGACGGAATTTGAGATGAAGG
ATTTGGGTAAAACCAAATTTTTCTTAGGATTACAACTTGAGCACCTTCCCTCAGGTATTT
TGGTTCATCAAACCGCCTATATCCAGAAAATATTGGAGAAATTCAATATGACAAATCCTA
TCCATCCAAAAGCCCTATGGTAGTTCGATCTCTAGACGTAGAGAAAGATCAATTTAGACC
AATGGATGATGGAGAAAAGATATTAGGACCTGAAGTTCCATATCTTAGTGCCGTTGGAGC
GCTCATGTATCTTGAAAATTGCACCAGGCCTGATATTGCATTGGCAGTGAATTTACTGGC
TAGACATAGCGCAGCTCCCACTAAAGACCATTGGACTGGAGTTAAGAATATCTTTCGATA
TCTCCAAGACACAAAGGATCTTGGCCTATTTTTTCAATTTCAAAGAAATTTAGACATTGA
TATGATTGGGTATACAGATGTTGGCTACTTATCTGACCCCCACAATGCCAGATCACAAAG
CGGTTTCGTGTTCCTACATGGTGGGGCAGCCATATCATGGAAGTCTTTCAAGCAGACCCT
AGTGGCTACATCCACCAATCATTCTGAAATAATCGCATTATATGACGCGTCACGTGAATG
TGTATGGCTTCGCAGAATGATAAACCACATACAAAAATCATGTGGCAAAGGTCTTATCGA
ATCTCCAACCATTATCTACGAAGTTAATGTTGCTTGTGTTGCTCAAATGCAAACGGGTTA
CATAAACTACAATATCACTAAGCATATTTCTTTTAAATTATTATTTTCCCATCAATTACA
CAAGAAAGGGAAGATAAACATTTTGCAAGTCAAATCTTGCAATAATCTCGTTGACCTACT
TACAAAATCACTCCCAGCTTCAACATTTGAAAAATATGTCCATGGGATAGGTATGCGACG
ACTTCGGGATTTGCAAAGATCAAGGGGAGTTTCTCTTTGAAAAAATAACCCGTTCAAACA
TTATATTGAACTCTTTTTTCCTTTATGAGTTTACTCTCATGATTCTCATCAAGGTTTTTA
ATAAGATAATATCAACATAAGAATATATGTCGTATATCATTTTTCCCCACCGGGGTTTTA
ATGGGCATATACAAGACATATTAATTGTCCTCTAAAACTTACGAGTGAGTTTTATCCTGT
CAAGGTTTTCTCACATAAGTTATCAAAAAGACAATAACATATGTTGTATCCTTTTTTTCT
TATTTTTTCCACCGGGTTTTAACAACATATCAAATAATGTTCTCCTCATATTTTTCTCAC
AGTGTTTTTGGAGTAGTTATTCAAGATAATACACGCTTATGATTAAAGAGCAATATTCCC
AAAAGTATACAAGGATATAAGACATATGAGAAGCAGCTTTGTACAAGGGGAGTGTTACGA
AACGAGACAACGTCTCTAGGAAGGGCGTGATTAGCGGATGTCGTTTAGATTAGGCGTGTC
CAAAGTACCGAACGGGCGTGTCCCTTCATACGGACACCTTCTCGCATGGCAACTGCCATC
TTTTGTAAACAGACGTCTATGCGGAGGCGTCCCAAACTCTTGTACTCTCTCCATCCCAAA
ATTCTTGTCTCAGGTTTGTTTAAAAATGAATGTATCTAAATACTATAATATGACTAGATA
CATTCATATTTAGACAAATCTAAGACAAGAATTTTGAGTGGGAGGAAGTATAAATTAGGC
TTTGCCCAGAACCGTGAATTTTGTTACAGACTGAACCGTGAAATTACTAAGAGGATAAGG
GAGGTCCGGTGCTGGCCTCGACCTCCCACTGTCCAACCGGCGAGCGGGCGCGGCGCGGGC
TGCTTCCCAGGCGCACCACTGCCCAACCGGCGAGCTCGGGCGTAGCGGCGAGCGCGGCGG
GGGCTGCTCCCCACAGACGATGGCGGACGCGAGCAGGCGCGGGGGTGCTTGCGAGGGTTG
CTCCCCAGGCGCGGAGCGGGCGCGGCGGGGGACACGAGCAGGCACAAGGGTGCGGCGAGG
GCTGCTCCCCAAGCGTAGCGGCGGACGAGAGAAGGCGCGGCGACAGAGTACGCCCCATCA
GCTGCCTCGAGCGTGCGGCAGCAGGCACGACGACGGTGTGCGCGAGGTAGCATCGGCATA
CGCTCACCGGAGAAATCCCACCGGACCGGTGGAAGACAAAGGTCCCAAATGCTTTTTTGT
TTTTAGGGTCAAGGACCCGATTGGTTTTTTTGCAGGGGTGTCTTTGCAAAACAAAATTGT
ATTCACATGTATTTTCTTGGTTTCTAGATAATTCTAGTTGGAAAGAACTAGGCTTTTCAT
TTTGCCTCACTCTGTTTAGTGGGACCCACCAGTCATAATCAGGTTTAAAATGGTCTAAGC
CACTGACTAGTGTTTTTATAAAAAAAATATCCTCGAAATTAGTGGTTTTGGGTATAAATA
TATAGAATTGTGGTTTTCCCAGCACTAGCCTTCAATGTTGACATCTTTGCAATTAACTCC
ATTTCCAACATATTCTCTATAAATTTCCTTCACTATCAATGTGATGTAGCTCATTAGCTA
CTCTAGGATTGCGAGCCAACACCTCCGTCCTGTGTTAGGGTTTGAAATCCTTCGACACGG
TGGTCGTAGAGACTGTGCATCTACCGAAACGTTCGATCCTGTGGTTGTGGATCATCCCTT
TTGACGTGCCTCGCTCCACGGGTGGAGATAGGAAGGGGTGAGGGGTCTCTGTCAATCGCT
TGCCCCCCTTAACGAATTTTGGCAGGTAGTATACCGTATGTAGTACGGGCTAATGACCGA
CTGGCCACAACTAATTACTTACTAGCGCATATATATATTAATAAACGAGCACCAAAAATT
AGAGAACCCTATAGCCGAGTAGAAAATAGGCCATGTACGGTTGTGACTGACTTATTGTGA
TCGATGAATTGATGTGATCATGACAAGCGGATATGTATCTTCTGCACTTTCATTAGAGTT
TTGTTGCTGTCATTTGCAGGATATAGGAACTTCCATTTAGATTTGATTGTCACCGTCATC
CTAGAGCATAGAAGCAACAACTTCTAGCGGATTGGCGCTTGAGCACGTGGTGGAGCGTCG
CAACATCGGTCTTCACAATAGTGCGTTTACCTCGCGCTATCGTCCATCCACGATGCGTTG
ATCCTCAGAATCTTTGAACCTGGCGATACAGCTCATGCGAGTCCACCTACTCCCTAAACA
TGAGGTATATCATTATGAATTAATATTGTTGGACTTTAAAGATTACTACTTAGTATTTTT
GTTAGATCTACCGTAAATTACAATATTACATACTTGTTTGATCGACCGAATGTAGTAGCT
AGAAATTTTTAGCCGCTTGTTTACTAACCTACAATTAAACAAGGGAAAAGCCAAATGATT
TATTTGGAAGTCTAGTTTGTTTAATTTTCGAAGTTAGTTATGTCAAGAATGAAGATGAAC
AGTAATTAAATCCGTACTTTGAAAATGTAAATCCGAGGAGATGGAGCTAGTCCGGCTCTC
ATTTCACTTGATATACAAACTCCTGATTCAAATATTGTGTGAGCGATCGTAGAAATTCAA
CTGTAAGCTCAAAGTGAAAGCACATCATAGAGCAATACTTTTGTAGTTATCAAACTATCG
CTTCACCCCCCCCCCCCACACGTTCAAATCCTGGCTCCACCCGTGCCTCTCTCCTCCTGG
GTGGTTGGTGGTACTAGGTTTCTCTGCTTCTTGCTTGAAGCCTAGGGTTTTGTGGAGTCA
AAGATGGCAAACCAAACTGAGTTGGGTGGTTTTCATCATTAGAAACAACACGTTAAGGAA
ATGCTTAGTCGATTGGATCTCCATGAAGATGAAGAAGAGAGTTTTATCTGGGAGGAAGAA
TTCAAAGATGGGGCGGTAGAGGCCAAGTGGCTTGCAATTGTGAAGGTGCATACTTCTAAG
TGTTTTAGCCCTGCAGCTTTGTACTCAGACATGAGATCTGCTCGGAATCCTGCTAGGGAG
GTTCGTTGGCATAAGATCGAGGGAACCTTGTTCACGATCCAGTTTGGATATCTAGGGGAC
TCGAGCACATTAGTGAATGTGGGGTCGTGTCTATTCCATCACCAAGGATTGCTTATAGAG
GAGTATGATGGATTCATGAACCCTAGATCGATGGTTCTTGATAATTCCAGTATGGTAAAG
GATGTTAAGGTTACCGGATAACTTCCAAACTCTAGTTGCAATGAAGGGATGTGCCGAAAG
ATGGACACTGTGTTAGAGGTCCAGATCACACTACCCGCTGACTTTGTGGGTGATTTTTTC
CAAAGTCACGTTGAATGTTACAAGCAGCTAGTTGAATTTGTTCTGGTTACAAAGAATGAA
GAAACTGATTATTATTTGGTACAATATGAGAAAAAAACTGATATTCTGTGGTCGGCTCGG
ACTGATCGGGCACTGGTACCAAGAGTGCAGAACCGGCTAACATGTTGTCACAAACCTGGA
ATGGGGCAATTTTGTAATGATGGATGGAGACCGAGGAAGAGGACGTGGTGTCAGTCGAGG
AGCTGTACAAGGAAGAGGTAATATGGGTGGTCGTGGTGGCCCCCTCCTGACTGTGGTCGA
GGAAGGGGAGACATTGACAGTGCCATACACCGGGGATGGCTTCTCCATGGGAACCCGATG
GCTAGCCTAGCAGTGGGGCCCTTAGGCCCACCAAGAAGACAAGTACATGAAGAAGGCCCA
AGGCAACCTATAGACAGTTCTAGAGTCTTCTTGTACTCCAAGTCACGAGGATGCAACTAA
GTAGATCGCATCTTGCTACTCCCGTAGAAGTTGTTGAGATTCCCCAAAGAAGAAGGGTGA
TGTAGAATAACATCAAAGTATTTCTCTAAGTTGGAGAACCAAGGTAATCAATCCAGTAGG
AGTCAAGAAAGTGTAGGATTGAAAGTATGTGTGAAGGGTGGGTGATTAGACTAGTTGACC
AATTAAAACTTATCTTTTTCACAATTTTAGTTGTAGGCAAGTTTTAACAAATTTACCAAG
TCAGGCAACACCCTACACATGCAAGTCTACGTGGTGTTGCTGATGCGTTGGTTTTTCCCT
CCAAGTGTAAAGGGTGATGTAGCACAAGTGAAAAGACCTCGATGAC