morexGenes - Barley RNA-seq Database

Contig contig_50370
Source Contig contig_50370
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_50370 (7707 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location
Predicted Genes from contig_50370

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_65575	2	1664 bp	AK366459	Available	Available	None
CDS Structure of MLOC_65575

Contig Sequence (7707 bp)

>contig_50370 7707 assembly3_WGSMorex_rbca.fasta
AGAAAGAAAATAAAGAACAGAGGAAGAGAAAAGGTGGGTCGGGATGGGGTCGCGTCCTAT
GTGGCGGACTGACCGGGTGCGCTCGGACGCGTCCGCGAGCCCTCATATCCTCCCCATATT
TAAGATGGATATGAGGGTTCGCGGATAGTCCGGACATATATGAACTATACGTGAGACTCG
GTTGAATCACTTTTTCCTTTTCTTCTCTCCGTTCACTCACCGGGCACGACCACAGGTGTA
TGAGAGATCATTTAAACGGTCTGGTTGTAGATGTTGTTATTAGTTAGAAGAGTCGAGTAG
GTCTAGTGGTTAGCCGTTTATTGCTTGTACACAAACAACGTGAATCCAAATCCTCGGCAC
ATCCTCATTTATGTTTTTTTTTTGTGTGCTTTTCATATGTTCCTTGCGATGCGTGTTCCT
GGGCCAGCCCAATTGGGCGTGAGCACCATTCTTCTTCCTTGATTCAAACGCAGGAACACG
ATTTCCGCCACTCGCGTCCGTTTGGGTTCATGTAGACAAAAAAAAATGAGCGGACACTTG
ACGCAACTTGTCGAAGGTCCGCCATGTACTCCTCCATTGCGATGTGTTCCTTCGCCTTCC
AGTCCTCCATAGCCAACGCTAGTCACTACCCCTGTCGGGAACGGTTGGAGATGGATGGGG
CGTCTCGCCCCACAGGAAGTTGAGGTAGACATCGACATCGTGTAGCCGGACATGCCACTG
GTCGTACTTGAAGGGCGGCGAACTCGGCTATGCGTGCAAGGAGTCGAGCCAATGTTTTTT
GTGTGTATCCAGTCGGGAGTCGAGCCAATGTTTTTTGTGTGTATCCGGTCGGGAGTCGAG
CCAATGTTTTTTGTGTGTATCCGGTCAGGATCTCCGCCACCCACATACTCTACCGGATAC
CGAGGTATTTCGTCTCTCGTTGCCGCGACGCGGGAAGCTTAGTAAAGTCGACGAGCCGGT
GGGAAGGGCCACAACGTCATGATGTCAATGGCGATGACATGAGGACGCGCCCGTGACGGC
ACGAATCCGTGTTGTGGATCGGTGACGGAGACCGACAACCATGGAAGGAAAGGCAGAAGA
GGCGGAGAGAAGAGTGAAGACGTTTTACTCCACCGTCGAGCGATGAACTACTCAGTACAT
TAGAGCATCTATAGCACAATCTCTTAAATCCGTCTCAAACGTGTGGACATGCCGCCTGAT
CACTAACCGGTCACGAAAAAGCAATTCAGACGGGCGTCTCAAACGGGCCTTAAACGCCTG
GGCTGACCGGCACCCCTCATATCCAGCCTAAATATGGGGCGGATATGAGGGCACCCGGGC
CCATCCACCACGACGAACCCGGTCCACGCTGGCCCACCCGACCCCACGTGTATTCCCCTC
ATCTATTCGTCGGACCAAACCCTAGCCACTTCACTCTAGCCACTTCACTCCCCTCACTTC
ACTCCCCTCACTTCACTCCCCTCCCATCACTCCCCTCCCATCCACTCCCCTCCGCCACAC
CAGCTCACCTCCGACGATCTCCAGCATTTTGGGGCATGGTAGGCTGCATATTTGACTCCG
ACCGGTCCAAACCTATTGACTGGGGTGTCATCCCATGCGGGTTGGAGGAGGCAATGGATG
TCCGCATTGCACTTCGCCACTCCCGGGAGAACAACGCCCGTCCGATGACAGGATCTGTCT
GGCACGACTCTCTAGCGTCGACTCAATGGGCGCTCGGATCATCCTGGGTAGGATCACCAC
GGGACCGGTGGCCTTCAAATATCTCGTTCCCCATCACCGGTCAGACAAAGTATGAGTTCC
ATAAAAAAACAATGTGCCCGTCGTTGAAGGAAAGGGTAGTCAAGGCCCAACTGGTTGCCG
ACATGACGACAACAAAGCCGGCTGATGGGCGGCACGGACGGTCACAATGGAGGAAGCCGT
ACGATGCCCACATTGTGAAGAAGCGACAACGGAGGAACACACACGCCCTCACCTGAGAAC
AGAATCGGGCAGTCCGTGAAATAGCCAGACTGCCACCAAAGGAGGACAACTCTGGTGATG
AGAATATCTGGCTCGGTCTGTATTGTGTTTTTGACCGGTACTTCTATGAGAAGCACAGCA
ATGGCATCAGAAAGGGCAAGGGCAGTTTGCGGTGATCTTCTCCATCATAGCCAAAATGCT
AAATTTTAGTAGTCCGATGGCATGTTGTATGTAGTAGTCGGACGACGTGTATGCGTTGTT
TACGTAGTTGCATGAGTTTGTATGAAACTGAGGTGTCCACTTGTGATAAGAAAAATTTAA
GACATGACCGATTAATGTCCGTGGATATACCAGAACGCATCTGTTGGTGTTTAAGGGGTT
TGATGTGCCAAATCCGGACGTAAAAGCTCTTAGGCCTTAGAGCATCTTTAGCCGTGCCCC
ATCAGCCCATATCCCTCCCCAAGGCCCTTTTGTCGCCGACGTGAAAAACGGCCAGTCGTG
CCTTGAGAAGCCTAGTTTTCGTCGGTTAGGGTCGGATTTGGCCCCGACAGACCCAGGCCG
AACCCAACGCGCTGGGGGCGCCGGTGGAAACGTTTTTGGCACGAAACATCTATGGACCCG
CCAAGTCGGCGACTAGGCGCGGTCATTGTCCTCATCGCCTTATTTCCCGCGGGAATCAAT
GCGAAGGTTGCGCCCCCGGTCAACGTCCCGTCCCTTCCCGCCACGCGTTCGCACCACTGT
CGCACGCTCGCCTCCTTCCCATGGCTATATAAGCCGTCCCTCCCTCGCCGGTGGCCGCAT
ACCTCTCGCCAGGCTTCTCTCGCCGCCGACGCCCCTCTCCCCCTTTCGCCATCGACACCC
CTCTCTCCACCAACGGCCGAGCCCTACCCCAGCAATGAAAGGGCGGCCAACGGCTTCGGC
TGCCGCCACCTGCACGAATCCGAGGGCCGCCTCCTCTACGAGGCGGACTACTTGACGCCA
CTGGATATGCGGGTGCCGCGATCGTGAAGGCTGAGCGCCGGCGGATTCCCGGTGCCACTG
CCGCCCTCTGGAGCTGACCGGAGCGCGGAGATCGCGTGCATCCGGTCGTCGCTGCCGGAC
AGCTCGCGAACCAGCCGAGGTACGCCCCCGACAACCACGGCGATCTGGCAGGGGTGCAGA
AGCGGCGGTGGAGTGCAGGACGACGACGACAGGGACTGCACCAACTCCTACAAGCTTCTC
GGCATATAAAAGGTTGAAGGCGGCAGCGACGATGACGGCGACGTAATGGTTTTTAATTTC
CGTTTTAAAATATGTTTTTAGTTTAATTTGTATAAATATCAATAAAAAACATTTTATTTA
ACTGAATTTGTGTCGTGTTTGGTCAAACTTTGACCGAGTTTGATTTGAAAAAGAAAGGCA
TGTGGCGACCTTGGAGGCGGCTCGAAATCCGTGCCCCCTCAGGCTGCTCTTAGTCGTGCC
GCCCTCATCTCGAGTGTGGTCCGTAGAGACCATACTTGTGACTGAGGTCCACACGATAGG
AGCTAGGAGGTCATGTCGGGTGGAGGCAGAAACAGAAACTCTCGCCTTCAACCAATGCGT
CGCATTGTAAACACGGTTTTACGGTCGGTGGCATCGAAGAGATTTTTAACTGAATTTAAA
CGGATCAGCAGGCATTTCGTTAGAGAAGAGACCACCAGATGAATCCGTGGAAATATCCGT
TGCGTATGCACAGTGCACTCGCCTCGCATTGACTCAGCCAAGGCAATCTTTCGGTGTGTG
AGGCCTATCTTTCTTGAGATTCCAAGCTCATGTGGAGGGCTTTGACTTGAGAGGGCTGAG
GCTGGAGTGTTGTAATCCTCAGACAACCTGAGTTGGCTGCTGGTTGATGCGACTAATTAT
ACTCTAGCTGGTTTGCCTCGTTTGACTGGATGCCGTTGACCATTGGGTCATACACTTGTG
TATTCTCCATACCCTTCTGCTCTGCTTTCTGAAGTTAAATTAGTACTGTAGTCAGTAGTG
TACAAACTTCTACCACAAGTTAAATTGGGAGGAAGGTGCATACGTCAGGGATGATTCAGA
ATACAAAGACGAACCTTAATGTAGGCACGATGGCTAATAATTAAGCTGATCAGACTGAAC
ACTCGCCATCCACTAAACAATTCAGAGTCACAGTATTCTAGGCCTGCATCAGGCCTCATG
TTCCCTGCAGCAAAGGACAACCCACTAGCGGGAAAAATACAGAGCCTCCACATGCAAAGA
CCACCAGCATCTAGCTAACATTTGACCCTGGAAGTTAACTAATCATCAATCAATCAAACT
GTCATTAGGCAGCAGACAAGAAGATATATTGAGTAGTAGAAACAGCCACAAGATTCTCTC
TCCCCCTCTCTCCCCCTTGTTTCATGCAGATCAAGATCTTCTGGTAGTAAATCCCTAGAA
GCCAGAGCTTTGCATTCATGGAACACTACCTTTGGACTCATCAATGCAAGCCACTTAACG
CCTTTACACATCAATAAATTAATTAACAACGCTGTAAGCTGCCAGCAGCTGGTTTGCCAT
GCATGAGATGCAGATTCAGAGTTTTATCTGTGTGCAAGATTTGAGAGTGCAGAGATCTGT
CCAGGCAGGAAGTATACTGAAGCATCTAGCTCTTTTCCCCAAAGCATCAGGGTGATCTTG
CCATGCGATTTGGGAACCGCATGTATTAGTTTATCCAGGGTGAGGATTACAAGTTACATT
TACCTTGGCACACACTTGTGGCCGGATCATGTGTCACTCACTGGACGAATCTTCGTTTAG
CAGCAACTTGTCGATTTAACGGTGGAACTCTCCGTACTCAAAAGGCCTAGCTTTTACTTT
GGATCTAAAACAGTAGCAAAAATAATATAAAAAATAAAAAATGGAATCAAAGGTTATGTT
TGTCTTTCCTTTGAATTCCTGTCTAGGGTCCTACTTAGTTCTCCCTATCCTTCTGCTTGA
TCTCATCTCATGCATCTTCAGGTATTCAAGACAACCCACATGTTCATTAGCCATTTTCTC
TCTAGAATTCTACTTCTCCCTACATAGATTTGCAGCCTTGGTTCTTCAAGATTATGACTC
TATATCCCGAGGAGAACGTAGTAGAGTATCGTGATCGGGAGCGCCACCAGCATTCCAAAA
ATAACCCTGAGAATTTCAGAAACATAAATTCAAACTTTAGTAAAACAAAACTGGTTTAGT
TTTACTCATCAGATAGTATATACTATTAGCAAAAGATTGAGGATGCGATGGCTAGCTTAC
GCTGTGCTAAGTATTTGAGGATGGCAGTTATACTCCTTGGCAAACACGAATGGAACAATT
CCTTGTGGAAGTGCTGCCTGTTAATCAATCACACATTCAAAAATAAAAGCCTTGATCTCA
ATACATTCCGCATTACTCAGAATCATTATTATCAGCGAATTAAATTGGCTATGCTTTGTA
GGTAAATTTTGATTATGATATGGGTTTAGTTTCCATGCCAACCTGAACAATGGCAACATG
TAGGAGCACTCCCCGGAGCCCAACGGCGATGGAGGTGGCTGCGATCACCGCCGGACCCGT
CAAGAACCTCACCGCCATCGCGAACGTGGCCACAGACTTCCCGCAAGAGATGATCTTGGG
TTGCAGAGCCATGAAGAGACCTGGGTCAGTTGCATAGGTTACCGTTAGGACTTCTTGGAG
CAAATGAGAAACGGAAGTGTATAGACCTGTCGTTATGAATAGACAATAAAATGTCAACTC
TGTACCTAAGCTGAACATAGCCATCCCTAGCCCTGCATCAGACAGGATGGATATGGATCC
CTTGATTATTGTAGGCATCTGAATGTTCCACCTGAGAAGAGAAAATTCAGTTGATATAAA
TAAATTAGCATATGCATTGCACCATGAATGTGATGAGAGACCCAAAGCTGTAGGTGCATG
AAGGATATGCATGTGCCACTCTCTCCTAAAAATGCCCGGTGCTTCCTCTGAAGTTTCCTC
CAGATGCAAAATAAATAGTAGTACAATGATATGGATGCAGATACCATCTGTACGTACAGT
GTACACACGGTGTGTCCTGCTCGTGCATCAGCCGTAGATCGCTAGATGAGAGTACATATT
GTTACTGGTCATCATGCCATGTGTGCAAGTGCAACCGATCTCGAACTCTATGGATGGAGA
CAAACACGGCATCCGCATGCAGTTGATTTTCTAGATTTGCTCTGCTGCTACAGGGCTTCA
GGTCAGGCCTTGCATACGACCTGCATCTGCAGCTGCATGCATGTGCCGGCCGGCGGACCA
GATCCAAGACCGACGTGATTATCATGTGCTCTCACATGCATCCATGCAACAATTATAAGC
AATCTATCCATCATTAGCGTATAGTTGATGGAGAAAGAGCAATGTCAATCCACACCCTCG
ATCGAATCCAGTTTAGCAAACTAACATGTTTTTTGTACGCAAGCAGTTCTGTGTTCTGAT
GCATGCATGCATGAGTGAGTGAATTGATGGACATGGACGGATGCAGTTTTGTGACAAAGT
GGTGATGGGATTGTGATGGACGCGTGTACCTGAAGGAGACGAGTGACCAGACGAGGCCGA
TGAGGCTGGAGTAGGTGTTGGGGTTGCGGATGAGCTTGCGCCACACCATGATGAGGATGA
GCCGGGTCATCACGCTCGCCGGCGGCATCGGGTGCGCCGCCTCCTCCAGCCCGGGCACGT
CGGCGCCCTTCTTCCGCGGCGCCACGTAGGGGGACCCCGACACCGGGAACTTGGCACCCA
GCCCCGTCGCCGGGCTCTTCATCATGCCGTCCTCGATCTCCACCTCCACCGCGTCCTTCT
TCGTCACCGGCGTCACCGTGCCGCTCACGCCTGAAGGTCGATCGACGCGTGCACAAGATA
CGTGCAGTGTGTGTCATGGAGTGATGCATATGGTTGAGAAACCCTGATTTGGGCGGAGCT
AGGAATCGCGTACGTACGTGTTTGTAACGTACCTCTGGGCGTGGCGCCGTCGCGCGGCGT
GGCTGCCGCCGGCGGCGCGGCGGCGAAGTCGGTGGACGCGGCGTGGTTGACGGCGTTGCG
GAGGTTGGCCTCCGACACGGGCGACGCGCTGGAGCTCCACACGAACATGTGCAGCTCCTT
GTTCGAGTTGGAGTTGGAACCCCCAAGCTCCTTCTTGCTATTACCACATTATTATCCCAA
TGCAAGGAATCCACAAGTCAACTCAAGATCATCCAACACAAGATCCAAACAAGAACTAAA
GACAATTAATTATTCATGTTCATGGTTGCGTTTGGGCCGGTGTTAGTGACACGTACCGTG
GCGCCGGCATCGTCATCATGCCGGGGTTGGGAGCGGGGTACGGCGCCGCCGCCTCGCCGC
CCTTGAACTTGTTGGCCACCTGCTCGTCGAGGCCCTGCCCGCGTGCACCGGGCGTGCCGG
CGACGGGGGGCTGTCCCTTGGGGCTGGCCAGCTTGCTCCCGTTGAACATGGAGTAGAAGT
CGGACTGGTTGAAGCTGGACTGCCGCGGCGTGGGCTCCCGCGACGTCTGCAGCGAGTAGA
TCTCCACGCCCGTGAGGTTGGACGCGCGCGGCGTCATGGCGTTGGACGCGCCGCGGTAGA
TCCCGGAGCGCCCTGCGCCGCCGGTGGTGGACCCCGACGCGGACCGCCGGATGACGACGT
GGACGCGGCCGTCGCGGCCGACCTCGGCGTCGGCGCACAGCGCCCCGCGGGCGGTGGCGC
GGGCGACGGTGGCGCCGCCCCGGGGGG