Contig Data
morexGenes
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Map Locations of contig_503454 (3286 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_503454

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65553 1 1896 bp MLOC_65553.1 Available Available LOC_Os03g06370.2, FRAME:-3, EVALUE:3e-141, 13103.m00698 protein PPR repeat domain containing protein, putative, expressed





CDS Structure of MLOC_65553






Contig Sequence (3286 bp)

>contig_503454 3286 assembly3_WGSMorex_rbca.fasta
TTAAAATAAGAAATATTTTCTTGCATTTGTGCACAAAATTTCAAAATCAAGCGATGATGT
GTAAACATAATGTGGTCATCATCATTGAAGATTATGTTTTTTTCTCCCGTTGCAACGCAC
GGACCATTTTGCTAGTATATTTAAATAGGCTACAGTGTGAAGGAAATAAAGGCTCTTTTG
GGACCACACAAAACTGAAAGGAAATTTTGGTTCTGGACACTGCATTTGGTTGGAATTGTT
GCCACATTTGACTAACTGAGCTAACCTGCCTGCTGTCTGTTCCACTTCTCTTTTCTTTTC
TAGCTGTTCCCTCATCTCTTTCGGAAGGGAAGCAAGACATTTCACACCCCTTTTTTCCTC
CTAAAAATGACGATTTTGGTAGTTGAGTCACCGTGTTGTGCAATGCGCATCTTATCCATC
AGCAAGCGATAGATCATTGTTATTAAGGTGTCCCATCTTGGACGCTTGAGTGACAAGGCG
CCCTGACAACGCCTTACTATTTTGCCCACCTCGCTTAGTCGACGCGTAGGCGTCAAGGAG
TTGGGTGCTCACCTTAGGACGCGTTACCGCCATGAGCACAATGTGATAGATTATGTGATG
ATCTAACAAATGCAGCGTCGAGGACCCAATTATGCCAAACCTAAAGTATACTTGAGAACC
CATGCTTCTATGATTCTATCTAGGAATTATTTGTTTCCTCGCGTGTTATTCGATTTCTAC
CTGCTATTTACCTCTGTAACACAGATGGACCGCCCTCATATATTGGCATATTGCCATTGT
ATATGCGTCATATGTGTTAAGTTTAATATCAACAATAGTTCTGTGATGATGATCCTTTTC
TTAGCTCTCTAGAGGGGTGGGTTCCATTGGAAGTGACTACTTGTAACTATATCATCAATG
CTACGGACAGCTTTCACATGGGCTGCTTGCCTTACCAATTCAAACAGAATTTGCGATGCT
TCATATTTAACCACAAAGAATCAAGGCCAAAGTAATCAAGAATATTGATAGGTGTGAACA
CTAACCAGATATATATAGATACTGACATACCTACGAATTAGACCCTAGAAGAATTAAAAG
AAGTTAGCGGAACTAAATATCGGGTATTATCTAGTATACCTTCCTTCAGCATGATACCAC
ACAAATAAAGCAACAATATGACTTATATACTGGGGCCTGGCTATATAGCAACCTCTTTCG
TATGTCATAATCCACTAATTACCAGCCAAGCCATCTAAAGATAAACAGCCAACTAGCTGG
AAAGGATACATATTTATTTGACCTTGGCAGCTAAGAGAGGCTAGCAAGGAAACTATAGAA
ATACGGCTTCTTGATGATAAGGTGCCCGACAAGGAAAAAAGATGAATCTAGCTCACCACA
GGTTATCTTCCGAGCTAGTTGATTATGTTACTATGTATGCTATGTAAGTACATCATATGG
TTTGACAGTAGCAAAGTGTAGTGTATCTTACTGGTTTTAGTAAAAGGGTCTCATTTGGTC
AAATGGGAACAGTGAAGTACTCCTAAGTCTGTTATACTACATGAGAAGTAAAAGAATGGA
AGTGTATTTATGCAAAATACTTCAGATAAGGGCTATCAAATCTTACTATATGATGCAGAG
GCCCGGGTTATCCCTTTTTTGGGAAAAATAAATAAATCATACTAGATATCAGAATATCTT
TTACAATCGAAAGCTAGCTTTAAGAACTTCGATCCTAATAAGGTGAAATATGATAACACC
TCACAGCAAAAACATGAACTACATACCTAAATGGCATGTTAGGCAGCAAAAAACCTCTCA
CTGGCCTGTAGAAGTTTAAAACCTATCCCCACTACACAAACCGCCACATATTCTATGCAC
TACAGTTTTGTGACATCTTGGCTAAATAGATAAACAATCAACATGATACTGTGACTGTGA
GAGATCGTTCCTAAACCTAATTAGAGCTAGGAAAAGTGGCACCAAGATCTGGTGTTGATG
CACTTTATTTATAACTTCTGCAAATACCAAACAAAGGAAGCCAGTGTACATACTTCTTTG
GAACCTCATGCAAATCCAGCTTCCCTCATATCTTTTATGGTTGCCTCAAGTCTTTGATGC
AAGTCAAACCTCCGAAATCCAGCAACTAATATATCGTAGCTAGAGCGGGTGAGCATGTAC
AAGCTTTGAATGCGGTTTAAAAACATCTCCAACCTATCAAAGGCCTTGTGACGAAAATAT
GAACAGATAACAGCCTCAACATCCTCTGCGCACAGAAACATCATGCCGTCATTCAACATC
CGGTCTATTGCATGTTCCATATCTGACAAGAGATCTGCACTAGCATAGAATCTGATAATT
TCACAATGCAATTGAGTTACAGAACTAAAGTGTGCTTCTGTTTGGATTAGAGCGAGCAGC
TGTTCCATCCCATCAACTTCACATCCATCCAGGCATAGTCTTGTTAGTCTGTCAACCAGA
GCTTTATTCAACTCCCAGTTGCCATCACTGACAAGTTTTATGAAACTTTTGACCCTATTA
ACCTCTTCTGTTCTAGAAAACACCTCAAGCTTGGCCTCCAAAATAGTACAGGTTGGCTTC
ATTTCAAATGAAACCATATCTGTGAAGACCAACTCAGCATCATCTAGCTTGTTCAACAGA
ACAAATCCCACCATCAAAGATTCGAAGGCTTGAATACCTGGAATAAACCCTGCATTCTTT
GCAGCCAAGTACCAGCTCATCATAGCATCGCCACTTCGGAGTCGCGAAAATGCACATATG
AATGCATCGTATGTAGCACGGTCAGGTTTGGAGTCCTCCATTTCTTCCATGGTCTCGTAT
AAGGTCACTGCAGCAAGGAGATCTCCGACAGCCAAGAAAGTGTTAATAAGAGCATTGAAA
ATGCCAGTGTTCAGTTGAATTCCCCGTGCCTCTGCGCACTCAAAGACTCTCATTGCAAGA
GCTGCATTCCTTGTATCTCCACAGAAATGGATCATTGTCGAGTAGGGTTCACAATTATGA
CTATTAACCCCTTCCTTTAGTAGCTTCTCTAGCTTCCATTCCAAGACCTGATCCAATGCT
GAGCTCATATCAATTCACCGTAATAAAGATCTGTCTTTAGAAATACAAAGAAGAAATCTC
ATGAATCCAGAAAAACTACCACACAAAACTCACTGATCATATTGGCTATAGACTAAGCTA
TCTGCTATACGTCAGGCCATTACATGCATCACAAATCTGCTTCTAACACGTGGGAGAAGG
GGGCAGGAGAATTTCTCGATCGCTTCTACTCCCTCCGTCCCATAAT