Contig Data
morexGenes
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Map Locations of contig_50316 (5339 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50316

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65544 3 2927 bp MLOC_65544.2 Available Available LOC_Os02g54890.1, FRAME:+3, EVALUE:0.0, 13102.m06287 protein UDP-glucuronate 4-epimerase, putative, expressed





CDS Structure of MLOC_65544






Contig Sequence (5339 bp)

>contig_50316 5339 assembly3_WGSMorex_rbca.fasta
CCCCCCTTCCCCTCTCTTTTCCCCCCTCCGATACAATAAAAATCCCTTCCGTCCGTCCCG
GATTTCCCGCCGGGATACGTACGCGCTAGGAGTGCACCCATCGGACGGAAGGCACCGCGC
CGATTTGCGCCTGCCTGTTTGCTTGCTTGCTTGCTTGATCGATCCTCCATCCATCCGTCC
GTCCGTGGTTGCGTCGTCGTCCGGGAGAAGGAGAAGGAGGAGCAAGGAGTGTGAGGGCTT
CTTGGTTTCTTCGTTGATTGGTTGGCTTGCCGCCGCGGGCGGGCAGCACGACGACGGCGG
GAGGTTTCAGCAAGAAGATGCGGGCGCTGGAGGACGACCTGTTCCCGTCCACCCCTGGCA
AGGTGAAGATCGAGCGGGCCGGCGGCGCCATGAACCGCCAGCTGCACCGTTGCTTCGCGT
CCACCAGCACCATGTTCCTCTGGGCGCTCTTCCTCGTCGCCATGACCGCCTCCTACCTCA
GCTTCCAGTCCTTCGTCGACACCTCCTCCAAGTACTTCGCCGCCTCCTGGGGCGGCCTGC
ACTGGGAGCGCCAGATCCGCGCCTCCGCCGCGCCGCGCAGGCCGCCGGGGTCGGCCGCCG
GGGCGGGGATGTCGGTGCTCGTCACGGGCGCCTCCGGGTTCGTCGGCGCGCACTGCTCCC
TCGCGCTGCGCAAGCGTGGGGACGGCGTCGTCGGCATCGACAACTTCAACGCCTACTACG
ACCCCTCGCTCAAGAAGGCACGCAAGGCGCTGCTGTCCTCCCACGGCGTGTTCGTCGTCG
AGGGCGACATCAACGACGGCCGGCTCCTGGCCAAGCTCTTCGACGTCGTCCCCTTCACCC
ACGTGCTCCACCTGGCCGCGCAGGCCGGCGTGCGCTACGCCATGGAGAACCCGGCCTCGT
ACGTACACTCCAATGTTGCGGGGCTCGTCACCCTCCTGGAGGCCTGCAAGAACGCCGACC
CGCAGCCGGCCATCGTCTGGGCGTCATCCTCCTCCGTCTACGGCCTCAACGACAAGGTGC
CCTTCTCCGAGTCGCACCGCACGGACCAGCCGGCGTCGCTCTACGCGGCCACGAAGAAGG
CCGGCGAGGAGATCACCCACTCGTACAACCACATCTACGGGCTGTCCATCACCGGCCTGC
GCTTCTTCACGGTGTACGGGCCGTGGGGGCGGCCGGACATGGCCTACTTCTCCTTCACCC
GCAACATCCTGCAGGGGAAGCCCATCACCGTCTACCGGGGCAAGAATCACGTGGACCTCG
CCCGCGACTTCACCTACATCGACGACATCGTCAAGGGCTGCCTGGGGTCGCTGGACACGG
CCGGCAGGAGCACGGGCACCGGCGGCAAGAAGCGCGGGCCGGCGCCCCACAGGATCTTCA
ACCTCGGCAACACCTCCCCTGTGACGGTGCCCACGCTGGTGTCCATCCTGGAGAAGCACC
TCCGGGTGAAGGCGAAGAAGCACGTGGTGGAGATGCCCGGCAACGGCGACGTGCCCTTCA
CCCACGCCAACATCTCGCTCGCCCGGCAGCAGCTCGGGTACAAGCCGACCACCAACCTCG
ACGCCGGCCTCAAGAAGTTCGTCAAGTGGTACCTCTCCTACTACGGCTACACCCGGGGAT
CCAAGAACTTGTGACCGCCGCGCCGCGCCGCGCCGCCCCCCCTATTCTTCCCCTCCTCAC
CCAACCCCTGCTGATTCTTTATTTCCGACCACTCCCGGATCAAACATTTTTAGTCCCATG
GATGGATGGATCATCGTCAAGCTTTAACAGCATTCTTGTCTCGATTCTTTTTGCGGGAAT
ACTACGTTTTAGGGTGGTGTTCTCCGGTGAAGAAAAAAAGAAAAATCCCGGATCGAATTC
TTTCCTTTCCTTGCCGCCGCCGCCGAGCGCCGACGAAGACGAAAGCAATGGAGCGAAACC
TTTTCTCATTGTTTATTTTTTCGATTTTTTTTCTCTGTAAAGACAAAGTGGCTCTTGATT
AGTTTCTTCTTTTCCCCTCCTCCATCTGCCAAAACCCTTTTCAAAATTTGAATCAATGCA
TGTAATCTCGCTGACGCGGTTTTTTTAATCTTATCTAACTAAATGAAGCTAGGACGAACT
GGCTTATCCGATCGCCCGTTTAAATTTCAAAAAATCTGGCGGTTTGTTCCTTGCCGTTCC
GATTTTATCGCTCCCGGAGAAAGCGCGCGGAGGTGGTCGCCGGAAAATTCGCGGAGGAGG
TTCCGCCTCCGCTTCCGGCGCCGTCGAGATAGAGATAAGCTTGGAGGGGACGCGCACTGC
ATTGGAGCGCGCGCGCGAGGGTGGCCGCCAGCTGGGCTTGGGGCGCGATGGAGCTGGCGG
TGGGCCCGGGCGGCCTTGATTGCTCCGGTGGGCCCGCGTGGCCGTCGCTGGGGGTGGGGC
CTGGGTGTCGTCGATTGGTCGGTGGCTGGGCCTGCCCACGTGGGCCACATGGGTGGGCCC
GCCAACGAGTATGGAGTGGACGGAGGCGACACTCGAGGATGAGCTGTATTCGAACCGCAT
TTCTTATTATTCGTAGTACTACCAAAGTTCTAGAAAAACAAATCTTTTTATTTTTATTCG
TGTATGCAGGCACACGAGTAGTACGTTTTGTTCTTGTTCCTGAGATCTTTTGTTTTTACT
TTATTATTCTTTGTTGCTGTCGCGGAGATTTGTTTCCTCCTGACTCGTGGCATCTCTGCA
CTATTTTACTTAAATTGTGGAACAAATCGACAAGGAAGTTGGAAATGAATATGTTATGCT
CTGGTGCTCCTGCGGAGCCACGACGAGTCGATGGTCGATTGGCCGGTGGCGGTGGTCGGT
GTCTCTCGCACGGAGGCCCAGGGACGGAAGCACCAGACACGCAGTTCGACTGCCGTGTCG
AGTGTCGACACACACCAAATAGGAGTTCGCTTGAACCCATGTCGTCGTATCGTTCGACCC
GACGGCGGAACTTGTGGTTCGCACGAGAAGACGGTGGTGCTCTTTTGGGGTATCGGAAGC
ATTTCATTTTTCTGTGTTGTCTCGTGACAGTGTGGCATGATTCCTTGGCATTGCGTATGA
TGCCGGGGCCGTCCACCTTGTCTTTTTTCCATGGTGCAGACTGCACTTGTCGTCACGGTG
TTCTAAAAGCAACTCCAACGCACGGTTCCACAGATATTTGTTTTATTCGGTTTTCGTTCG
TTTTGGGACAGGAAATGAGGCCGTGTTCTTTTGAATTTGTGTTTGCGTCAGCAGGACGTC
CAACGCGCGGCCGCATCTTCGACCTCATCTCGTCCGTCGAAGGATAAGTAAAATAAAATT
AAACGTAGCAGAAGTAGTTCAAATGAAACAAAACAAGTAGTTTCATGTCTCAAAAAGTCT
ATTATTACAAATCAATCGAAATTTAAATAATATCAAATAGTCTTACAAAACCACTCAAAG
TTTGTGCGCACGAAAAGAGGTTAAATCGGTAGATCTACTCATTGTCAATGGGATCCCACA
TGTGGTCAATCAAGTCATCTTGGAGTTGCGTATGAGTGTGCCGATCACTCATGTCATGAT
GAAATTGGACAAATTGTTTAAAGGTTGCAGGAGGTCGGTGCTCAGGCTCAACATTCTCAC
TCTCGAAATCAAACCCTTGGTCGTAGATGTTGTCATCACGTTCATCCTCAACGCTTATGT
TATGCATGATCACACAAACAATCATCACCCCTCAAAGTTTCCGAGTGCTTCATATCAGTG
GAGGGTTTCGAACGATACCCCGTTGAGTCTGAAGCACGCCAAAGCACGCTTCACATCTTT
CCTAACACTCTTTTGCATTTGGGCAAACATGTGTCTCTTCTCTCCTTACGGGTTGGGTAT
GGTCTTCACAAGAGTGGAGCATTTGGGATTAAATACCATCAACTAGGTAATATCCCTTGT
TGTAATGGTGGTCATTGATCTCAAAGTTGACCTCTTGGGAATGGCCTTCTGCAAGCCTTG
CGAACACCGAACAATGCTGAAGAACACTAATATCATTGGGAGAACCAGCCATGCCGAAGA
AAGAATGTCATATCCACACATCTTGTGAAGCCACCGCTTCAAGTATGAGAGTGACACCTT
TCACATGCCCCTTGTACTGACCCTGCCAAGCAAATGGACAGTTCTTCCACTTTGAGTGCA
TACAATCGATACTACCAAGCATGCCCAGAAAGCCCCTCTCTACATTGAATGTCAACAACC
TCTGTGTATTAGCGGCATTTAGCTGTCTCAGGTATTCAGGGCCAAAGACAACTACCACTA
AAGGGAACGAGCCTGACAATAGTACCGGGGGTACGAGTGAGGGAGCGACGCCAGATGACC
CACAAGTAGGGGATCAAATGTAATCCTTTCAACAAGTAAGATCGACGAACCCAACGAGGA
ATAGAAGGAAATGAAAAGCGGGTTTTCAGCAAGGTATTCTGTGCAAGTGCTATAAGTAAC
AATGATAGATNNNNNNNNNNNNNNNTAATTCGTAACAAGTGACAAGTAGCAATAGTAGCA
AAGGTGCAGCCAGGTAGCCCAATCCTTTTTGTAGCAAAGGACATGCCTGAAAGTNNNNNN
ATATTAAGCAAGTGCTCCATGGAAATTTCATTTCTGTCTAGTCATGTCCATCATGTTGAG
TTGATTCACGTTTGCTACTTTNATAATTTGATACGTGGGTGGACCGGTGCTAAGTTGTTG
TTCTTACTTGAACAAATAACCAACTTATGATTACCCTTTCTCGCAAGCATTCACAACTAT
TAAAGAATAATTAAGACATATCTAACCATAGCATTAAATGTGTGGATCGATACGTCTCCA
ACATACCTATTTTTTCAATCAATTTTGCTCTCATTTTGACCTTTAGTTTGTATGATTTGA
ATGAAACTAATCCGGACTAATGTTGTTTTCAGCAGAACTATCTTGGTGTTATTTTTATGT
AGAAATAAAAGTTCCCGAAATTGGACGAAACTTTATGTGAATTATTTTTGGATTTATAAC
GAATTATGGAACAAAGATCTACTGGAGAAATCCTGCCACGGGGCCACAAGCCAACATGGC
ACCCCGAGGTCACACCCTTATGGCTTGTGGGGCCTACACGGCTGCTCCGACCCTAATTCT
AGTCCTATAAAATCACATCTTTCGAGAAAAAATGAGAGAGAAATTTTCATCTCCGGAGGG
ATGATGTGGAGTCCGTTTGGGGCTCCATAGAGGGAGATTCGTCGTCGTCGTCATCACCAA
CCATTCTTCATCAACACCGCTATGATGCTCACCACCGGGAGTGAGTAATTCCTTTCTAGG
CTTGCTGGACGGTGATGGGATTGGATGAGATTGACGATGTAATCGAGTTAAGTTTGATA