Contig Data
morexGenes
Links



Map Locations of contig_50265 (5330 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50265

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65491 2 1906 bp AK356471 Available Available None
MLOC_65490 1 1667 bp None Available Available None





CDS Structure of MLOC_65491






CDS Structure of MLOC_65490






Contig Sequence (5330 bp)

>contig_50265 5330 assembly3_WGSMorex_rbca.fasta
TCAGGGGTAATATGGTCTTTTTGCAAGTCATTTAATGACCCCTAGTCCATGTTTAGTCCC
TGAAAAGAAATGGGTAGGGACTAAAGACTTTTTAGTTGGGACTAAAAAANNNNNNNNNNC
TTTTTAAAGAAACAGGGCCTAAGAAGTTTACCCGGTCGAGTCGCTCCATCATCACGTGTG
GAGTGGCTCAATTGCGGGGATAAAAACGCTCCTTACTTCCGCTTGAGAGCTACAATGACA
AGAAAAAATCTTATGAAATCACTACAAAATTCCAATAGTGATACCATCGGCAAAATAAAT
GAGCTCGATGAGATGGCAAAAATTATTATGCAACTCAACCAACCAAACTGCCAAAATTCT
CCCGAGCGGGCCTGGTTGGGGTGAATGTGGGCTACCAAACGCGTCATAAGCGTTTCCATT
TCTCGTCTCGCCCGGTTGCCTTGGATCATTCGGTTTCCCAAGCTTGGTTGCCCAATTTGC
TCGCCAGCTAAAAATATTAACTAAAAGAAAATTGCTTAAAAACGCATTTGATTTTTTATA
GGTTGATGTTTTTGTAAATTCAGTAGACTCCATGAATTTCTTCACGGAATTAAAACAAGT
TCATGAATTCAAATATATGGGTGAATTCAAAAAATGTTTGTGAATTTAACGATGCTCTAA
ATTTAAAAGAAATACAGATTTAAAAAATAAATGTTTGTGAACTTGCAAATATGTTTGTGC
AAAACAAGAACTGTTTGCCAATTCAAAGCATCCAATGTATGTGACAAAAATCCACACATA
TTAAAAAAAATCAGAATTTGAAATAAATCGTCAGATTCTAAAAGAATCAGAATTTACATT
GCCCACGTAGCAGTAGCACGCCATTAGCGGCGTCGCGTTCGCAAGTCCCACCGTGCTTTG
TCTACTGGCCAGGAGAACACGGGCGGAAAAGCAAGCAGCTCTGAAGAGCCATGGCATAGA
CCAGATCGGAGCACAAGACCTCCAGTCAAAGCTTGAACCAGAAAAGAAAGCAAAGCGTCC
AGAAAAAGAAAAGAAAAACGTCTAGACGCATCGCTCTGCCCTGCCCTGCCCGTGCACTGT
GCAGCCAAGACCCGGCATGTGGGCCGGGCACGGATTTTCACCGCGGTGACGCGGGCAAAG
ATCACCTCGATCGGTGAGAAACCTCCGGCAGTGGTCCTGGTCCATGATCCGTCCCTCCGT
CCAGCTCCAATCGGCAGCCTGCTCCCCTCACATGCTCGCACACCCGGAGGTGGCCGTCGG
TCTCAGCCGGAGGTCACCACTCACCCACCCACGAAGACGCTTACGAAAACGCCCACCACC
ACACCACCCCCACGTGCCACGGAGGGTGGAGCACGAACCAACGTGTGCCGTGATGGAGAA
CGAACCAACCAACCCACAGATCCATCCTGACGAGGAACTCACGCAGATGTGCGAGCTGGC
CGAGCGCACCAAAGATCAGATCAAGCACGCACTAGTGGTTAAACAAACAAATTGCAGCAG
GCGCTTCTGCTGAGACCGGCCAATTTTTAGGCTAGCCGAAGACTAAACATGATCCAGATC
CAAGGGAGTGTTTAGTTGTCCAAGCAACGCTGCATTGTGGCCTACTACAGTACATCCTCT
TCAAAGCAACCTGGGAGGAAATTCCTCCGTCCGGTTGGGCGATCTTCAGGCTTGGCAAGA
AATATCCTAACCACTAACCAGGGCCACCAACGCAAGCAAGCAGCGGTCCAGACACTGATC
GTGGGGAGCTGCTGCCCTGCCTGCCACCATCATCAGTTGACACTCGATTACCAACCAAGC
TGTCTTCCAAGCCAAGCACCATTTCCGGTAGTACACAAACTTCGAGGCAAAACAATGATC
AAGACACGAGCCAAACCAAAACGATCGAGCACGCGGGAGCCCAGACAGCAAACCACAACT
GGGACGCAAAAAGGCTAGTACCATTATAGTACTTGGTAGAATTAATCTATAGTGGTAGTA
AGTGGTAATCCAAGCTTAGAGTAAAAGCATAGTTACAGAGACGAGTTAAAACAAAGATAT
CCCTCCCATGAAGAGCCAAGGGCTGGCCGGCTACAGTACCACCACCAATGTTCTACATAC
GCTGCAGCGGGCGGGCGTCCAGATGCATGCAAGCAAAGACCAAAGAAAAGGAGCACAGAT
TCCAGCATTCCTCCCCTCTTTCCCTGCACTTTGGCCGACCTGCGGGCTGCGGTACGTAGA
TATTTCCATCCCCTTTCGTTAACTACTACTATAGTGAATCAATCTCGCATCCCGAGATGC
GTGGAGGACGCTGTTGCTTTGCTTCAGACCGTGGAGGGGAGCTCGCACTTGCCCATCTCT
GCAAAAACAACGGAATAAACACACACACACACACCGAGTAAGATCAACATGTTATAAAAC
GACGGAACCTCCATTGAGAACATGGAGGGCCAACAAATTCTTGTACCGGGACCGAAGAGG
AGTAAAGAATGCGAGAGGTACACGAACAAGAGGCAGCCGAGGAACCCGGAAGCACGACGC
CGTATGCCGACGCGACGGCCGGCCATGCATGGCACGCATTCCGACGGCGGAAGTAAAGAG
CACAAGGTCGAGTCACATCGCGCCGAGCCGCGAGCCACCACGCCCGGTCTGGAGCATGGA
GCTGACCGACAGCCGTCTAGCCACGGTCATAACTCGAGACCCTGACCAGCAACTGCACGC
TCTCGATGAACAGCAGCTCGAATCCAATGCGGACGTGAACTGGTACTGGCGTGCAAATCG
CAGTGCGGTGCAGATTTGGGTCACAAATCACAGCGTTACAAGTCCCTTTTAGTCCCATGC
AATCAAATCCTTATAATCTGTTTATGTCTCTCCTGTTTTTTTACATAGGACTAAAAAGGA
TTTTTTTTAATCCCTACATAAAAAAGTCAATGAAAAGAAACACCCTAAGATGAGCCAACT
ACTATTAAATTAGTACGTACACATTAAAAATGTATTATTGTATATGTGCCTATTAGATTG
GGCATGACCGCTCCTTATAACCGATAACATGCTCTAAGGCGATTGTCGCGATTAATGGCG
TGTGCTTTGCTTGTGTGGGGGCAGAAACAAAGGACGGGAAGGAATCATTCCCGTACTACG
ACGCAAAGCAACTTTCGCTTGATTTCAAACTGTGCTACCCACCTTCCCTCTGTAAATTGC
CGTCTATGGTACCGGGATGTTTCTCGCTTTAGGTAGTACCGTGGCTCCCACACAAACTTT
CACCGATGCTTGTACCATCCCTGGTGCATGTTTACTACCAGTAAATTGTCCAGTTCGTAG
TAACTTTTCTTCCTAAAGAAAGTACTCCCTATGTAAACTAATATAAGAGCATTTGAATCA
CTATTTTAGTAATCTAAACGTTTTTATATTAGTTTAAGGAGGGAGTAGGTTATTAACTTT
GCATCATCAGTAATTTGTTACTACTACTACTAACGAAACTTAGGAGTGGTCATGATCGTG
TAACTAGCACCAAACATTTTGCTCCGATTAGGAGTACCTAGCGCCTAGTACATTTTGGTC
GGCTTGGGAGTACCTCACCTACATCTTGCTCTGTAATGCAAGTAATAATGGACGTACATT
TGCACGAGCGGTACTACTACTACACGTAATCTTTGCTTGCAGGCAGGCAAGAAACGAGCG
CATTGAGCGGGAAGGAAGGAAGCGACTCGCTTGGTGGCTGGTTGACGACGTAGGCGGCGC
CGGCGAAGTCGCAGGTGCCGATAGAGCGGCCCTTGCGCTGGTAGTAGTCGTTGAAGGCGA
AGGTGGCGTGGGAGACCATGGTGTTGGGCTCGAAGCACGCCGCGCCGGGCTGGATGCCCT
TGCAGTCCGCGCCGCCCGGCCCGCACGCGTAGTCCAGCGCCGCCTGCAGCCGCGCCTCGC
CCGCCATCGCGTTCGCCACGCACCCCGCCTCCCCCGGCGTCGCCGCCGCCCTCACCGCCC
CGCCCGCTCCGGCATTGCCGCCGCCGCCGTTGTCCTGCCACCCGAGCCCGCCGCCGCCCA
CAGAGCCGCCGCCGCCGCCGAGGACGAACTCCACGTCGTACACCTTCTGCTTGTTCGGGT
AGAACACGCCGTAGTTGCGCTCCGACGTCGGCCCGGGCTTCTGGTTCTCGTTGAAGAGCG
CGAAGAGGTACACGTCCATGTCCGCGTCGGGGCGCCGCGGGGTGCCGGCGTTCTTGGACA
GCACGCGCCGCACGAGGTTCCCGTTGTATGCCGCGGCGTTGCCCGCGCCGGCGCCGACCT
CCTTGGCGTCGCCCTTGGACGGCCACCCCGTCTCCGACACCACCACGTGCACGCCGTTGT
AGCTCCCCAGCTTGCCCACCGCCGTGAACACGGCGTCCAGCTGCGCGTCCAGGAGGCTGT
AGTACTTGAGCCCGCTCCCGGAGTCGAGCTCGCCGGCGTTGGGGCGGAAGAGCGCGTAGT
CGAGGGAGATGACGCCGGCATTGTCCGCGTAGGCGAAGAACGGGTAGCAGTTGACCATGA
GGTAGGAGCCGGTCTGCGACAGGAAGTCGAGCATGGGCTTCATCACCGACTGCGAGAGCT
CCTCCCTGAACACGCCGGCGGACGGCGGGTACGAGTTGGCGAGCGCGGTGAGCGCGACGG
GGGACGACACCTTGACGGCCTTGTCCATGCTGAGCCTGGCCAAGGCCGCGTGCACGTTGA
TCATGGCCGGGACGAGCTGCGCCGTGACGTTGGCGGCCGTGGCGAACACCTCATTGCCGA
CGGCGATGCCCTGGATCTGCGTGGCCGGGTAGTAGGCCGCGACGTTCCGGCGCACCCACG
CCAGCGCGTACGACGGGCGCCGGGCGGCCGCGGCGACCTGCTCGTTGGGCAGCGCGACGA
CCACCTTGATGCCGCTGTTGGCGAGCGCGCGCAGCACGGCGGGCTCCGTGTCGTAGAGCT
TGACCTGCGCGATGCCGTGCTGCTTGAGCAGCTGCACCACCGCCGCCGGGCTGGGCAGGT
CGTTCGCCACCCGCCCCCAGTTCACGCCCACGGTGCCCGCGTCTGCAACCAAAGACATCC
ATCGTCAGTACTCACTAATTAGTACAGTAAATAAACCACACCGGCATTGTCGACGGAAAC
ACGAGCCGCCATCGGCGTCGGCGCGGTGATCATTACCTGCGGCGGCGAGGAAGAGCAGGC
ACAATGCCGCGGCGAGGAGGAGGCCGCGGGGGGGAACCATGCTCTGCTTGCGGCGGCGGG
CGAGAAAGCAGAGTTTGCCACGGCGGGGAGCGAAGTGGTGGAGAGTGTGGGGGAGCGAGG
GAAAGGGCGGGGAGTGGATTTATGGCGGGGGGGGGAGGCGGGGGCCGCGG