Contig Data
morexGenes
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Map Locations of contig_50260 (3377 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50260

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65486 1 876 bp None Available Available LOC_Os07g27580.1, FRAME:-3, EVALUE:6e-63, 13107.m02755 protein HAD superfamily phosphatase, putative
MLOC_65487 1 504 bp MLOC_65487.1 Available Available LOC_Os05g10310.3, FRAME:-1, EVALUE:3e-50, 13105.m01107 protein acid phosphatase, putative, expressed





CDS Structure of MLOC_65486






CDS Structure of MLOC_65487






Contig Sequence (3377 bp)

>contig_50260 3377 assembly3_WGSMorex_rbca.fasta
AGAGATTTCACCAGAGGACTACATACGGATGTATATANNNNNNNNNNNNNNNNNNNNNNN
NNNNATTTTGCTTTGTATGTAGTCCCTTAGTGAAATCGCTTCAAAGACTTATATTTAAGA
ACGGAGGGAGTACATTTTATTGTGAGTAGCAATTGATCTCAACTTAGGAAACTAACCAAG
CAGCAACAACAACATAGGTGATCATGCATGGAGCATGTGTATAATTATTGAGAGGATGGA
GCTTATTCTTCGACCACGAGCATTCGATGACTGCAGTCCTAGCCAATGTAGTACATGGGA
TCGGGCAGCTTGAAGGTGCGAGCGCCCTCGGGGGCGCCGAGGATGTCGCTCCACTGGTCG
CCGATGTTGCCGACGATGATGTACCCAGCGTCCACCAGCTTCTGCCGCTCGCCAGATTTG
TAGGTCACCGCGGAGCCCTTGAACCCTGGTTGCTTGAGCAGCAGGTTCATCCATCCATAG
ATGCCTTCGCGGCGGAGATTGGCAACCGTGATAGCCCTCTTGTCCTCGGTCCGGCCTGTT
AGGAACACCGGCTTGATGCCCACTGCGAGCAGCTTGTTGTACAACCGCTTTGTCTCCGGT
AGCACGGGCGCGCTTCCCTTCCGCACGTACGCACGGTAGCTCGTCGCGTTGTACGGCCTA
GCCCTGCACATGGGTTAATGAGATGTCAGCTAGTAGATCTGCATACTGAAGAAGATAAAA
CCATCTTTGTGTTGATCCTTGGACATCGATCGTATTATCACATGCAACATGTTCTTTCAC
GTCATATGCTACGACTATCGACTAATTTAGATACCATTGATAAGCACGGTTCAATTTCAT
GGTGTCGGTGTCATGATGTTATTTTTGTATTTTAGTGGGTTAATTTTAGGGTGTGACTAG
GTCTCAATCGACTGAGATTTAACCAAGTCTCAGTCAAAGTGATATACTCCTTCCGTCTTA
AATTTTTTTGTCTTAGCTTTATCTTAATATGAATGTATCTAGTCATATTTTAGTGTTAGA
TACATCCATATCTAGACAAATCTTGTATCAGAATTTTGAAACTGAGGCAGTAGTATGTAA
GAAGGAAAAAAAACTGAAAAAAATTATTTTGTTTGAATCTTCAATCAAAACTAAAGAAAA
ATACATAACAAAGTTTCAGTCGACCGAGATTTAGCAAAACTGTTTACTTAAACAAGGTAC
ACATAGAGTTTTTAAGTTTAGCTGAACGGAAAGATCAGTGCAAGCCCCTGCCCAAATGCA
CCCGCAAGAAATAAATAGCATGTACTCCCTCCGTCCAAAAATACTTGTCCTATAAATGAA
TAAAATAAATGTATTTATAACTAAAATAAGTTTAGATACATCCATTTTTATGACAAATAT
TTCCAGATAGAGGAAGTATAATGTGCACGTACGTACCCGAAGCCGTGGATGGCGTAGTAC
GGTAGGTTGGAGAGCATGGTCTCGTCGATGTCCAACACCCACACCTCCTTGCCGTTGCCG
GCGAGCCTGAGGCTATCAAGGTAGGCGATGGCCTCGTCGATGACGACCTTGGAGTCGCGC
CGGTAATGGCTGCCGAGCATGTAGTGGCCGACGTAGCCCTCGCAGTTGGCCGGGACCATC
TTCCAGTCCCGCACGTTGTACGCCTCCACGCCCAGCCGCCAGCTGTCGCACGGCACGCCG
CCACGGCTCCCGAGCTGCCCGCCGGAGCCCAGCAGCGGCCGCAGCGCGTGGATGTGCGGC
CCCACGGCGTCATCCATGGCAGTCGCTTCAACCTCCGCCATCGGCATCCGGATGTTGGGA
TCCCTTGCGCTGCAGGAGGCCGCTGCGGCCATGAGAGCCACGGCGACGAGTATGGGCATC
CTTCCCATCGCCATTGTTAGTTTGTGTGTGTGCTGCTACCAGCAACTCTTGGGGTGCTCT
GCTTATTGAGGTGGTACCGTGAAAAGAGCATGTGGTGGGCGGCTCGTCACATACTCCCTC
CGTTCCTAAATATAAGTCTTTTAAGATATTTCGCTAAGAGTCTACATACGGAGTAAAATG
AATGAATCTACAATCTAAAGTATGTCTATATACATTCGCAAGTAGTCTACTAATGAAATC
TCTAGAAAGACTNNTATTTAGGAACGGAGGGGGTAGTTAGTTAGAGTGTATGTGTTTTCA
TCACTCACGTGTCTCGAGCAGCGTATACATAGTACAGTACAAAATTTGTTTCTGCCACAT
CCAATATCTCTCTGTAAAGAAGCCATCGCTGCCTGTGATGTGCTTGTTTTCCCCAACAGT
ATTTGTTGCCACTTAGTGCGAAAGGCTAGCAAAAGTGTTACATAGATGCATGGATGATTT
TGTACCGTTGCAAATGTCGAGCCAAAACCTGTTCACTTTGGCTTAAAGACAAAACTTGTT
CTGTCGAGAGCAAATGAAGCTGGGAGATGTAAATCTGGATCAACATGACAAGATATGGTT
GCCTCCCCTCACACCTTACATTCTTGGGCTTTACCTACACTACTAGAATCGACACATATG
CCGAGTGCCCGGAGCACTCGTCAAAAGTCAGAAAACACTCGGCAAAGCTTTTACCGAGAG
TTGTACTCAACGAAGTGCACCCGGCGTACACCTCTCCGGCAAACAGAAATTTGCCGAGAG
TTAGAACACGGACACTTGGCAAACACTTTGCCGAGGGCTGAACAGTGCCTCTCGGCAAAA
CAAAAGTTACTTCAAATTCGTTGGTTCCGTCAGTTATTTGCCAAGAGCCACTCTCGGCAC
TAAAGAAAAATGAATAAAACAGAAAACTGAAGAACATTAACTGACGAAACTAAAAATGGC
ACCTAACGGTGAACCCAAAACTATAAACTGCATTTGACACGTACAGGTTCAGAGAATGAA
AGACAAAATGATATCTAGCATGATTGAATGAGAAAATGATAAACACATAGGCAAACTCCT
GATAAAAAAAGTGAAAAAATGAAGACTAACCAATGAAATAACTGGACTGAAAAATAAAGA
TCAATCAATGAGATTACTGGACAAAATGAAACTGAAACTGACATAATGAACTAAATGTCA
AACTAAAATGATATTTAACTAAGGGAAACTCTTGTAGTCTGTAGTCTGATCGGAGGTAAT
GCATCAGATCAATTGACTACCGCCGATTCCGTCCGAATCTCATTGTGAGGATACTTCTTA
TCCCATCTCTTGTTTTTGGAAAAAACAAATCACGTCAATCAGTTGGTAATCACCCGCATC
TCCCGCGTAATCTCCTCCCCTGATCAATGGCCCGAGGATGCTCTTCCAAAACTCATTCTT
CTCTCTTTCCTTACACGTACCTCCACCCAGCTCGCATCAACCGCACCGCTCCCATCATCT
GTATCACCATGCTTCAT