| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_50225
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_65461 |
1 |
816 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_65461
Contig Sequence (8026 bp)
>contig_50225 8026 assembly3_WGSMorex_rbca.fasta
TTTTGTCTATGTATCCACATATGCACTGTGTTTCCAATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGGG
CATATTTCCAACAAAATCAATGTCATTTCGACCCCAGAGGAGTAGAAAGGAATAGAGAGG
AAGGACGACCCCTACGACAACAGTCCCGTATCCTCTCCTCCGAAAACAACAACTCTCATC
TCAGTATGTGGATTTAGAGTGAGAATTGCCCGCATGAACAAAAAATGTAGCTAACAATAT
CAACAGACTAAGCAAGTATTACTCGTAGAAAAAACATTAAATAGCTGCACGACTTGGTTT
TAACAGCATTACATTAAAATCTGGGCATTTACTCTGATTTAAAATGGACATATGAAGTGC
TAGAAATTTAACGAAACAAAAATAAACCAACGTTTCGTCAAAAATATTAACAGTTATTAT
GAATCCCTATAAAGAAAGATCCTATAATCTAACGTCTACGACCTAAATACGAAAGTACCT
ATAATATATGGTCCATGATCTACGAATATGAATAAGAAATGTCATATATATAATCTACGA
ACAAAGAATGTACCTAACAATATCAACAACACTATATTAAAATTTGTGCATGACCTGTAC
TTTAAAATGGACATATGAAGTGCTAAAAATTTAGCGAAACGAAAATAAATCAACGTCTCA
GCAAAACATTAGCACTTATTATGAATCCCTGTAAAGAAAGGTCCTATAATCTAAGGTCTA
CAACCTATGAATATGAAAGTACTTATAATCTACGACCTCCGATCTATGAATACGAATAAA
AAAGGTCCTATAATCTACAAACAAATAATGTATCTGACACTATCAACAGCACTACATTAA
AATTTGGGCATGAACTATGGTTTAAAACATTAGTTGTAACCCTACCAACACAAAAAATGT
AACAGGACAAAATACGAATCACAAGCAATAATCTACAATATACAAACCCTTGTCATAAGC
CCTAACCCACCTACTCCTAACTCTAACTCTAGCTTCCCTACCAATGTGGGTGGCGGCCAT
GAAGGTGGATGTTGGTGGCGGCACGGCCGTTTGTGTGCATGACGGAGTGGACTGCGAGAT
CGTACAGGATCCCATGGCGACGATGGCGGGGGGTGGCAAAGTGGACGACATAGCTGATGA
GGGCGGCAAAGGGGACGACGGGGCCGACGGTGGCGGCGATGATGACAGTTGTGCCGACGG
AGCAGGTGAAGAGGACAACAAGGCAGAGGCGACAATGGCATTGGGTGTGAGATCCGTCGG
CCAGAGTCAGAGTGAGTGCGTAAAGTGCGGGGACCGATGACGGGGGTGCGGGTGGGTTGA
TAAAATGTGCTCATGGTGTGACGGGTGGTAACTATCACCCGCCACAATAATGTTCTATCA
AAACTGGACAACTCGCGAGGATAACTAGTGGCAGTTGCTAGCAAAACTCGCCGCTGCTCG
ATCACCTACCTGTGAAGGGCGATAGGTAATATTCACCATTGTTGAGTTAGGCAAACAAGG
CTCGTCCGGAAGTTTATACCGGTGGCGGGTAGTTATTGCCACCGGACACTCTTAGTTTTC
AAAAATATTTATGACGGGTAGCACACCGTGTCCGTCATTAGTTGAGGTTCACATGTAAAC
ACTTTTCTAGTAATGAAAAGGGAAGAAAGTGGATGTGGCTAGAGCCGGGTCATCATCCAG
TTTTAACAGTCGGACTTTGACCCTCGGACGACAAGCCGGAGCGGCGTTCACACCCTCCTA
CCCAGAAAAGCGGCCATCGGACCGTTGGGTTTTCGAAAGATTTCGTGTGGGATCCGAAGG
TCGGTCGGGGCGGTGCCCGGTCCGTCTCATCTCTACCTCAAATTTGGTCGAGGACGGTTT
GAGATGCCGAAGCAAATTATTTTTCTTAGGCGACCAGTGACCGATCCATTCATGTAAACG
TTTGAGACCGGTTTGAGGGCCACTCGTGGATGCTCTAATTTTAGTGGGTGCGTGCCGCTC
GTGCTACTCATGTAGGGTGGCGAAGATGATCGTGCGTGCATGTCGCTGTGGAGCCGAGTG
CGCTGCCCTGCGGCCGTCCGTTGCGGTTCATTCACGGAGAAAAGCCAGCGGCGGAGATCT
ATTTCGAGTTAAATTTCTCTCCAACTTTATTTACCTACAGTGGCCGGATCAACGGCGGGC
AAAGGCGTATGCGTGCCGGTACTGCCGTCCGTCGTCTTCCCGGTGATGATGGATGATTCT
TGTTCCCGATTAAAGGTGGTGGGGGGCGGTGGGGCACCGCGCGCTCCCCTCCGTCCTTTG
CCGCCCCCGCCCTGCCTATTTATAGGCCCCCCTCCCCGCCTTCTTCCTCCTCACCAAGCA
AGCACACCAGCCTCCTCACTCCTCACAGCACATCGCTTTCCTTCCCTCGCCACCGCCCAC
CAAGGAAAGGAGCATGTCTTGCTGCGGCGGCAAGTGCGGGTGCGGCGCCGGCTGCCAGTG
CGGCACCGGCTGCGGCGGGTACGTGCTCTGCTCTCCTCTGCTACATAGTACATAATAGAA
CGACGACGACGCATGAACCGAACCATCGTTTCGGAAGTTGAGGGTACGTAGGTGGTGGCA
GTGGCACTGACTCGTTTGCGTGTGTGTGTGTAATGAACGTAGGTGCAAGATGTTCCCCGA
CGTTGAGGCCACCGCCGGCGCCGCCGCCATGGTCATGCCCACCGCCTCCCACAAGGGGTA
CGTACGTCGTCATCCGCACCAACTAACCAGCTCTTTCGTTTAACTGATGAAAACGTGCAT
GCTTCTCTGACTGGCTGACTGACTGGACTGACGGATGGGTCGACCTGGTTGCGCTTGTGC
AGGAGCTCCGGCGGGTTCGAGATGGCCGGCGGGGAGACCGGCGGCTGCGACTGCGCCACC
TGCAAGTGCGGCACCGCGTGCGGCTGCTCCTGCTGCAGCTGCAAGTGAGCCGGCGCCCGG
GAGGCCGGCCGGCAGAGGCGAGCACGAGGATGAGAGGAGGACAAGCAACACCAACCAAGC
ACCATCACCATCGCCATCGTATCATCAGTAGCCGCTGCATGCGCGCGCGCTGAATAAAAT
AAAACCGCCGTCGTGTTCGTTAGTTCTGTATGCCCTGCGTGTAGCGTTCGACCAGTGTGT
CCTTCCTCATGCCTCCGATCCGAAATATACATGGCGCCTCAGCTTTGATCCCGTATGCCT
CTGCTCCCCTACAGCTTGTGAATCTGAACGCCTCTGCTAAACAGAGAAACTTGAGCACTC
ACCATCAGAAAAACTAATTAAGAGCGGATCAGGAAAACTACGAACGGGTCTGCTTTGTGG
GAGTCAATGTTGATGAACTGTGAATGCATGGCGAGAACGAACCGATTGTACGTACGTATA
CGAGAGAAGAGATGACGGGAGAAGGCTGGTTGTGGACGGTTGCGACGCAGGAGGAGGACG
ATGATGATGATGATGATGATGATGATGATGATGGGGGCAGGAGCTAGGTAGGTAGGCGTA
CGTGCATGCAGTGCGGTGAGCAGTAGGACAAGTTAGCTGAGTCAGCGATGATTGGGATAA
GGACATGGGCAGGGACGGTGGTGATGGAGGGCGACGCCTCTCTAGCTAGGCCGAGGTACG
TAGGTAGAGGTCACATGCGGTGTCGCACACGCACGCCTAACCTAACTCTGCGAGAACAAA
CAAAACGCCAACGGAAAGTCTTTCTGAGAGAGCTTTCTTTCTTCATCCCTCCGTTTTTTT
TAATATAGGACCTTTTAGATATTATATCATGAACTATATAGGAAGAAAAATAAATAAATA
TGTATTTAAAAATATATCTATATATATTTGTACGTAGTTCATTGTGAAATCTTTAAATGG
TCTTATATTTAAAAACTAAGGAAGTATAATCATAATCATAAGACCGAGGGACGGACACTA
GTAGGAGAAACCTTAGTAGCAGCGCTTGTTTTACCAATGCGAGTAGCGCAGATGGTAGCG
CTACTGTTAAGGCGTTACAGCTAAGTTTTAGCAGTAGCGCTGGAAAAACCCCGGAGGGGG
AAGAGGTGTGGCACAGCACTGCGGTGCCACTCGCTCAAAAATAATAGTAATATTATTTTG
CTTTTCTTAAATCATTTTTTAACAACTGTACTTTTCTGGAAAGAAGGTTAAACCCCCGGT
CTTTGGATCAATCGATGCATGCAATTATCTTTATTAATTATTTCATAAAGGATTGACAAG
AATATACATTAATTCATTCAAAGCCATCATTCATACGTACAGACTCGATAATGTGAAGTA
CTCTCACTCTCCATATCTAAAACTGATGTCATCGACAATCCATCCACATAACGTATCAGC
ACCAACAGCCCGTGTAGCAGACCTAAAGCACACACCGCATGCACATGTTTTAGAAGCCGC
AATCATCATCGGACCACTGATCCATCTTTAGGAGAGAGATCGGCATCATCCTTGCGAGTC
GAGATAACCGTCGACGCCATCACGACATCCAACGGCGCCATTGTCCTGCGCTCGTCCGTC
CAGACCCGAAGACTCTGGAAGATCTGTCGTGCGTAGCATCTCCCAACCAGACATGACTCG
CGTGGTACCTGTCGTTCAAGCATGACTTGACAGCTCTACCGAAGCTCCGTGCAAGACGAA
GCCGCTCCACCTCTTGCCTCTGTCTTTCAGCGTTGCTCCACAATCGATGTTCCCAAGAGA
GAAACGACACTGCAATACCACCATCGTCCGATCTGGAAGACCAGATCCTAGAGTTTTTTC
CCCGAAGCAGCACGAGTGGATCGACAACAGTTACACGACGATGCCTTCATCAATGTAACG
GCGTAAAATGCCGCCATCACCCGCCAACGGCTCAGTTTTCACCGACAACTATGTCTCCCC
AACTCACAATTGAGACTAGATGACGGATCTTGAGATCCGACCACCTCTCGTGAAGGAGGT
GGCCACCACCGCCATGCCCAGGGCCAGAGCCCCCGACGTCCTCATCTTATAGGGCGAGCT
CAGTGGCAGCATGCCGTCAACGGAACAAGGATGATACATAACAGTAACTTGTGCGGCTCG
TCGAAGCCCACCTTAGATCAGATCGGGCACCCAAGCAACCGCCGCAGGACCCGCCGTCGT
ACGCCGTCGCCTGCATGCCGAAGCTGGCCACCGCCGATCGCCGCCCCGCGTGATTGCTGT
ATGTCCGGCCAGCTAGGACAGCCGCCCCCTGATCGGATCTGGCCAAGAAGAAGCGCCGCC
GCCGCCGCTGCGGCGCACAGGCTTGGCCTGCGAGCCCCTAATGGCGGCAGCCGTGTTAGG
TGTGATGGCATTGAAGAGGAGTGGAGGAAGGGGGCGGGGCTGCTCTGGTGCGGCGGGGCG
GCTTTGGTGCGGAGTGGGGTTCTCGATGGGATCTGGGAGCGAACGAGCGACAATCTCCTC
TTTAATACCTGTATGAAAGCCTCTTGATATTATTATTGTTTATATCTATTTTTCTAGCAA
ATCTTCATTTTAAAAAATGCTTCAAAGGGACACGGCAGAGCTGTTTGTCCAAATGGAAGT
TGTTCCACCCAAGTGCAACTCTACGGTTGCTATTTCGGGCGATCAACACTCGCCGTGGTC
TCTTTAGTTATCCATGGGGCAATGTTTCGACCATATATTCCGAGGGAAAATGGTTTGCTT
TGGCCTCTCCGATTCCTCCACCACAATGTTAATCAATATGATTAATCTTGAATGAACCTG
GACTCACTCACTGGAAAGGACAACCAGGAGGAGAAAGCAAGAACAGGCCACGAAGAAAAC
CTGAGTATTCAGCATCTTTGCCTGTTCGAGCATCCAGTAGTCCAATCGTGTCGAGGAATC
CTGGCCCATGGCACGCTTGTGCACCGTGTTCTTTTGCCTTGTTGCAGATCGGCATCGGTA
AACAGCAGAAGAATAATATCTGCATTGCTTCAAGTTGCAACCAGGTTATCAAGTAAATTA
TACCGATCCATTGTTAATAATCAACAATCATTTAAAAGCAATGTCATATCTTCTTGCCTT
TGCATGGGTGACGCACATACGCATAATTTTATTTAAGTTGAGGTGAAATAACGAGACCAA
GCACCAAACAAGCAGAGTACATCATTGAATATAAAACAATGGCAGAACCATGACAAGATA
AAACGTAAACACCTACTCCCTCCGTTTCTAAATATAAGTCTTTTCAAATGTTTTATTAAT
AGACTACATACAGATGTATATAGACATACTTTAGAATGTACATTTAATCATTTTGCTCTA
TATACAGATTTATAGTAAAATCGTTTAAAAGACTTATATTTAAAAACGGAGGGAGTACTA
TTATGACTAGTAGGCGCTAGGCATGCAGAGGCAGAGGGTGCTCCCCTTTTTTAAAGAAAG
AAAACATGCAGTATGGTACAAAATAGTTGAGTCGGTGATGATTCAGAAAAGGACATGGAA
ATGGACGGTGGTGACAGCCACGCCTCTAACTTGTATTTCCTTCATCTTAAAATACGTGTC
TTAAGCTTAACACAATTTTATAGTAGAGCTAGTACAAAATTGAGACATATGTTTTGGGAC
AAAGAAAGTATCATGTAAATAGGCTAAAGCCTGAGAGGGCACATGTTGTGTCGCACACCC
ACCTAGCTCGCGAGAACAAACAAAACGCGAGCAAAAACTTGAGAGAGCTTTCATAGCATG
GACACAGGCGACTCCAGGCGACTATTTTTAAATTTAGTGAATTTATTCATTTTTTTACCT
TCCCATCAGATTAACCGAGTTTTCAAAAGTTGTTGGTGTTGTTTTTCATTCCTAATTATC
TCCGTTTTTAAATATTTTCAGTTTTAGTATTGACTTGACCTGTCGCCTTGTTAAACCATT
TTCAACGGGAAAAACTATATGTAGTCTTGGCTAAACTGAAGTTTTTTTTACTTGCTGGTA
CCAATTTAGTATAAAAGTAATCTTAAACAACTTAGAATAAGCTAAGGAAATTAAGTTGCT
CCAATGTAGTGCAACACTACAACTTAGTATACGCATGATTCCTCTAGTTATCTGCGCATC
CTGTTTCAGCCATATATATATTCCCAATGAAAATAGTTTGCTTTGGCATCTCTCATTTAT
TCTTTCATCATACTAGTATTAGTCATCATGGTTAACTTTGAATAAACCTGGACTTGAAAG
AAGGGACAAAGGGACAAAAAAGGAGGGAAGAAAAGGTGATGGGAAACCAAAGGCAGCAGC
ATCTTCCCTATTACGAGCATCCACTAGACAGCAGTCCAATCGTGTAATCCTGGCCCATGG
CACACTTGCGCACCGAGTTATTTTGCTCTGTTGCAGAGTACTGAGAGCACCATCAGCTAT
ACTAGTAGTAAGTAGTCATGCATGTTTGGAATGCTCAAGTTGCGACCAGAGTACCAAAAT
CATACTCGTCTATCAAGTTTTTCTTCTTGCAAAAGGAAGGTCCTACCTCCTGACCCCTCC
ATACCTAAATACACGACTTTGATACATCCCCTAAACACAAAAACGGTCCAGATTAATCGA
TACCTCTTCATAATAAAGGGCAGGATGACCATATTCACATACATGTTGTATTTGTTTTTC
ATACGCACACACCCTCCTCTACTGAGCAGGCATGTTCATGTTTTCTCTATTTTTTAAACC
ATAAAAATAAAGAATGTTTGAAGCACGATTCGAAACATGCACCTTTAGATATTATCACAG
TTGCACTGACAAACTAGGCACCAAGACCTCACGTGCTATAAATGTTTTTTATTCTAATAA
ACAACTCCGGAAACGCAGTATTCTCTGTTTTGTTTTATTTTTCTCTTTATTTTCCCCTTT
TTTTTGATTTCCTTTGCCTTTCTAAATGCGTTAGCTTTTTAAACCTCGCACCATTTGTTT
TTTAAAATGATGATTTTTTCAAGTTCGTCAATTTTTCTTCAAAATAGGTGATTTTTTTCA
CAAATTGATGAAGTTTTTTTTCTAAATTCGTGAACTATTCCTCAAA
