Map Locations of contig_50211 (6636 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50211

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65455 1 2402 bp AK354960 Available Available None





CDS Structure of MLOC_65455






Contig Sequence (6636 bp)

>contig_50211 6636 assembly3_WGSMorex_rbca.fasta
AGTGGTCTTTACTGCCTCGCCTCAATTGATCGATTTGTGTAAGACACAAATCTGCTGTCT
GTTCAATTGCGTCCTTCATCCAACGCACCGAACATAATACTGTTGATTCAGGACGCATCT
TTAGCTAGCAGGTTTCTTTTATGATATATGCTCTCATATTTTGATATTAACATTCAACAT
GATCTAAACAATGCAGGAATTGCTAATTCAGCAAGGGAGGAAGAAGGGCTTAGTGGCATC
CCAGCATTTCAAAGTGTTGGTCGTACAACAAAAGATGGGGCTCTTGGTACTGCTGGTGCA
CCGGTTCACATGGTTGCATCAAAGACAGGCCAATTCAAGGAGCAGCTTTGGCGTACCTTC
CGGGGCATTGCACTCACTTTCCTAGTAATCTCTGGCATTGGGGCTCTGATTGAAGATAGA
GGAATCAGTAAAGGTTTGTCATTCTGAAGTAGGATGGCTATATCATGATCCTTATTCAGT
GTCAGCAGCAATCTCTATTGACTTTGAATTATATATGCAGGCCTTGGATTGCATGAGGAG
GTTCAGCCAAGCTTGGATTCGAGCACAAAATTCAGTGATGTCAAGGGGGTTGATGAAGCT
AAAGCTGAACTTGAGGAAATAGTTCACTACCTACGAGATCCCAAGGTGAAGTTCTATCGC
TTCGCTGTTCCATCCACCAGTGAATTAGGAAGATATTAACAGCTGGGTAATGATACTGTA
AACAAATATATCACCCCAACGAGGCTGCTATAATAAACAATTAAACATGCTGTGCTGTAG
TGAAATTTAAAGACAGGCACAGTTTAGTTAGCACCAAATCAACTGGTCTGCTACATGATA
AATTGATACTTAATCATGTCATGCCTCCTTTTCCCCTCTATTTATTGTGATTTTTAGCCT
GCAGGAGAACTGCGTTTCCTATCTAATATTTTCATCCTGGTCATCTAGAGAAACTCGATA
AATGACATAAGTTATTTCAAGGCTCTCCTGCCTTTCTTTTGAAGTGTTTGCGCCCTTTTA
CTTCGTACTAGTAGCTTTTTAAGTCTTATACATAGAATGAAATATACTATTGCTTTTGTC
ATGACATTGTGCCATTTATACGGCTTCAGTAGTACTGAGAAGTTTGTTAAACCAGGTTCT
GCTTAAAGATGTGTGGAGTTTTTCGTGTGCTGTGCCCTTGGTTCTTTTATAAGTATTCAC
CAGCACATTCCATGCTTTGCAGCGTTTCACACGCCTTGGTGGCAAGCTTCCAAAAGGTGT
TTTGCTTGTCGGCCCACCCGGGACAGGGAAAACCATGTTGGCAAGGGCCATCGCTGGGGA
AGCTGGTGTTCCTTTCTTCTCCTGCAGTGGCAGTGAATTTGAGGAGATGTTTGTGGGTGT
CGGGGCAAGAAGAGTGAGGGATCTCTTCAGTGCAGCAAAGAAGCGATCTCCTTGTATAAT
TTTCATTGACGAAATTGATGCAATTGGTGGGAGCAGAAACCCAAAAGATCAACAGTATGT
GAAGATGACCTTGAACCAGTTGCTTGTTGAGCTGGATGGCTTTAAGCAGAATGATGGGAT
AATTGTAATTGCAGCAACAAACTTCCCCCAGTCACTGGATAAAGCCCTTGTAAGGCCTGG
GCGGTTTGACCGTCATATCGTGGTTCCTAATCCAGATGTTGAGGGCCGACGCCAGATCCT
GGAGACTCATATGTCAAAGGTAAATAATCCTTTGTTATCCCATGCATTATATTCTGTTAG
TAATTTTATTAACACTTGATTGATTTTCTCCATCCACATTAGGCGGTTGACCCTTGACTT
TTCTCCCTGATGAACTGCAGGTGTTGAAAGCCGACGATGTGGATCTGATGACCATTGCCA
GGGGAACACCTGGTTTCTCAGGTGCAGACCTTGCAAACCTGGTGAATGTGGCTGCTCTCA
AGGCTGCCATGGATGGGGCAAAATCTGTTTCTATGACCGACCTCGAGTTTGCCAAGGACA
GGATCATGATGGGCAGCGAACGCAAATCAGCAGTGATATCCGACGAAAGCAGGAAAATGA
CTGCATACCACGAGGGAGGGCATGCCCTCGTTGCAATACACACGGCTGGTGCTCACCCCG
TCCACAAGGCCACCATTGTTCCGAGGGGAATGGCTCTGGGCATGGTCACACAATTGCCAG
AGAAGGACCAGACCAGCGTGTCGAGGAAGCAGATGCTGGCAAGGCTGGACGTCTACATGG
GAGGGCGGGTGGCTGAGGAGCTCATATTAGGGGAGAGCGAGGTGACGTCCGGCGCGTCGT
CCGACCTCAGGCAGGCGACCCGGCTGGCCAAGGCCATGGTGACCAAGTACGGCATGAGCA
AGCGCGTGGGCCTCGTGGCCTACAACTACGACGACGGCGGCAAGACCATGAGCACGCAGA
CGCGGGGCCTGGTGGAGCAGGAGGTGAAGGAACTGCTGGAGACGGCCTACAACAACGCGA
AGACGATCCTCACGACACACAACAAGGAGCTGCACGCGCTGGCGAACGCCCTCATCGAGC
GCGAGACCCTCACCGGCGCCCAGATCAAGAACCTGCTGTCGCAGGTGGACAGCAGCAGCG
ACAGCCAGCAGCAGCCTCAGGCCGCCGAGGCTCCGCAGCAAACGCCGGCGGCCCCTGCCT
CGCCCCAGTCTCCAGCAGCAGCGGCTGCGGCCGCCGCAGCAGCTGCAGCGCAGCAAGCGG
CAGCTCAAGCCAAGGGGGTCGCGGGCATCGGGTCCTAGCCACACAGGGCAACAGAAGAAC
ATCAATCCAGCAAAGTGCCATTAATTAGCATGCCTTTTTTTTTTATGGACAACAGGGCAA
ATTCTTAGCTGCCTCTGTCGAGAGCATCTGTACTCTGTAGTAATTTAGCTAGTTGGGAGT
ACAATTTATATGTGTTCCTGGCTGTTGGTATGATGCAGCCTGAAGAAGAAGATCCATTCA
TGGCAGGGGATCTGCTGATTCATGTCAAGGAGATTTTGTAATCTCCGCATCAATTAGACC
TCTTATCATTTGATCATCGCGTCACATCGTATGTGGCAATCTTGGATAAGTTTTTATCGC
GTCGGTTATGCTCCGGTTTAGACGGTTGTTGTTGCTGCGCAACTTTTTTCGATGGTAAAA
GCTCACCAGGAATGGCATGGCCTTTGTATGCACTCTGTTGTTTCCTTTCTACTATATATC
TATATTGAGATTGATTCTTGATGCAATTGCATCAGGTTCTTGCTGGTGTTGATGTTTTTA
CCTTTGACAAGGTGAGTCATGCCATGTGTAGATCACAGAAGTGTGTGCAACAGCATTTTG
TCTCCAAAATTTGTGGTAGTAAGAATGAATGGAAAACCGGCATTCGCAGGCCTGGTCGGT
GGGCTCGTTGTAGGGTTTGGATTTGTCGAGTTTTGGAAGGCCTTGCTGCGTGAAGTATCC
TGAGAACTATATACTCCCTCCTTTCCTAAATANNNGTCTTTTTAGAGATTTCACTAGAAG
GCTACATACGGAGCAAAATGAATGAATTTATATTCCGTATGTAGTCTTTTTAGTGAAACC
TCTTAAAAGANNNNNNNNNNGGAACGGAGGGAGTAGAAGGGTAAAAAGTGTTGATTGGGA
GTCTTTGTCTAATTTGTTAGGTTCTGGAACCCTCAAGTCTTATCAAATATTTGAAGAAGA
AATACATCATCACAATTATAGTTTAATGTAACAAAAATTGTACTCGACTGCTCGAACCAT
GTTGACAGCATAATTGTATTGTACATATATATGGACGGCACGCTGCGCCCGTGCATGGAT
GTAAGGCTGTCTTCTGTTTTAATGAGAAAAGATGCGGCAGAGCGAGCGCCCGTTCTAGAC
AAATAATCCTATAATATGTAGGTGAGCGACTGAATTGATTTTTCAAATGTTGTTAGTATA
CTTTTCAGGGTAAATTGGCATAAAATATGTTTCTATAATCTATAGTATACTTTTTTTTGG
CCATTTGATATTTGATGCTTAATTTGACGAACTATTCCACAGCAGATTTGATGGGAAATA
GTGCTCCTTTCAGAAATTACTATTGAATAAATGGTAATAAGGAATGAATGCTTTTTTTTT
ACATTTAAATTGTTTCTCAGCTAGAACAAATTGGTTAAAAAATTTCCATAAGTTTTAGCG
AATAAAATCAAACCAACAATCGATGCTTGAAGAAATATACATAGTGGTTTTTGCCTATAG
TAGTAAGGCACACAAGCACACAAGCACACAAGCACACAAGGGGTTGGGCACAAAAGACAT
TGATACTTAACAGCTAACGCGGCTAAAAACTGTGTGGCCTTACCACAGTCAAATACCGAG
CTCATATCAACAATTAAAATCATTGCTGGATGGCCTTACCACAGTCAAATACCGAGCTCA
TATCATATCAACAATTAAAATCATTGTTGGATGGCCTTAACACAGTCAAATACCGAGCTC
TTTTTAGAGTTAGGCGGGCGCTTTAAAGTTCATCTTTATCCCGCCATCTTTCTCTGCCTT
CTGAAGTAGATGCGTAAGCCAAAATGGTTACAGATAAAAACAACATAAAAATCTTATTTC
ACTAAGTATACTGTATCATCTTTTGCTTCTATATAAAGGCAAACTTTCGTCCGTGGCGTG
CTTAGAAGATATTGGTGTTGCAACAACACTCTTGTATGTCGGATCACGCGTCGATCACAA
CAAAGATGGGTGCACTTTGGGGTTGTTCTAACGCCATCCGTAATAGGGTGATCGCAAAAG
GAACTCACCGGTTCATAAGAAACGTATGATGAGTGACGAGATAGCTCAAGACTAGGATTT
TGTTCCTCCGACGATAGAGCAATATTTTTAGGACCCTGTCGGGTGACGACATCCATCATT
GTGCCCTAACTAACACACAATGTACTGGCGAACCAGCTTGCTACACCTGCAACTAATTGC
CCGCGGTGCTGGAGCAAAGTGCGGTGACGGAGGCACGTGACGACGATGCCCATGATCACA
AGGGAGACTGCAAAAGTAGTGACGTCAGTAATAACCCCCACTTCCCACCCGACGGGCATG
TCGTACGTGCTCGGAAGTGGTGTCGGTCGAAGGAAGAAAAGGGAGGAGGAAGAGAGATAG
TGTTGGATCGTCTCGAGATGAAGAAACAAAAGGAGGAATAAGAAGGAAGTAGCGGCAAGA
GGAAGGAGGAAGAAGGAGACGATGACTCAACGCGACTCATGAAAGCGATCGCCGGTCACA
TGCCACTCATACATCTCCAAAGTATCTATAATTTTTTATTGTTCCATGCTGATATATTTT
TATCATTCTAGGATACTTTTTGGGTACTTATTTACCAAGTTATATTATTTTTGAGCACCA
CCCTATTGACCCAATGCCAGTGCCAGTTGCTGTTTTTTGCATGTTTTTCACTGTTCAGGT
TTTCAATATCAAACGAATTTCAATTGACCTGAAACTTTTTGAAGATTTTTCTCGACCAAG
AGAGGACTAATGAGTATCGGAAGAAGGCTGGGGGCCACCCGAGGGCCCCACAAGCCAACA
TGGCGCGGCCTAGGATGGCGCGCCTTGATGACTTGTGGGAGCCTTGAGGCTCTCCCAACT
CCGTTCTCTGGCTTATAAATTCTCATATATCCAAAAAAACCTAGAGGCAGTCCCAAAACA
CTTTTTGCGTCGCCGCAGGTCTCTGTTCCGATGGAAGGCCATCTAGAGTTCTGTTCCGGC
ACCCTACCGGGGGGCGGGGGGTAATCACTGAGGGCCTCTTCATCAACCTTGCTGCCGTCA
TGATAATGTGTGAGTAGTTTACCACAGACCTACGGCTCCATGGCTAGTACCTAGATGGCA
ATCTCTCTCTCTCTCTTGATCTACAATGATCATCGCATCTTCGCTTNNATCCATATGATG
TAATTCCTTTTATATGGTGCGTTTGTTGGGATTCAATGCATTATGGGTTTATGTTTAGAT
TATTCACGATAAATATTTGCATCTTCTCTGAATTATAATATGATCCTTATGTGCATGATT
ATGATACCTTCATAATTCGCTCCGATCTGTTGAAATAGTTTGGCCAACTAGATTGATATT
TCTTCAGTAAGAGAGGTGCATTGTAGTAGGTTCAACCTGGCAAGTTTCTATATTCTAGTG
ACAAAAGGGGACAAGATGCGTCTTTGTGTTTATGCTACTAAGGATAATACGATGAGTTTA
CTCATACTGCTTGAGTTTACTTTGTCTATATCATGTCATTGTTCCTCATGCATTACTCTA
TTTTACTTAATNNNNNNGATGCATGCTGGATAGCGGCCAATGAATGGAGTAATAGATATA
GGTGCACGCAGGAGTCGTTCTATTTGTTTATAGACATGATGCCTATATACACATGATCAT
TGCCGGGAATATCGCATAATCATCCGCTTTTTATCAATTGCCTAACAATAATTTGTTTAC
CCATCGTATGATGTTTTCATGAGAGATGCCACTAGGGAAAATTATGTCCTCCAGGTCTAT
TCACCATATATTTACAAAACCTTCAGTACCTTGTTACCATTTACTTGTTTTCATTTTATC
TTGCAATTTACAATTATCTACACANNNNNNNNNNNNNNNNNNNNNNNNNNCAAGGGGATT
GACAACCCTCTTGCTGATATGTCTCCATCGTATCTA