Contig Data
morexGenes
Links



Map Locations of contig_50186 (4897 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50186

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65442 3 1760 bp MLOC_65442.3 Available Available LOC_Os04g43164.1, FRAME:-1, EVALUE:0.0, 13104.m04279 protein expressed protein





CDS Structure of MLOC_65442






Contig Sequence (4897 bp)

>contig_50186 4897 assembly3_WGSMorex_rbca.fasta
CGAGCGGGAACGCGACCGTGTTGGTGGTGTTGAGGCGCCGGTGGTGATTTGAAGAGAGAG
AGAGAGGATTGGGGATAGAGATGGATATGACATGTGGGGTAGAAATGTAAGTGAGAGTAA
ACTTTGGTCCCGGGCGGGATGGATCTTTCCCGGTGTGCCAAACACGTCGAAGGTTTAAAA
TGACCGGGATGAGCAAGGTCAAGGTATCAACTTCAGGGATTTAAAAGTTGGTGTTCATTT
CAATCCAGCTCTACAATCTCAAGGTTTAAATCAGACTTTACTCTTTGTTTAAACATTGTG
TACGCACGCTCTATTCCTACGAGCATATGAGAAACTAAACCGACAGATTAACGAAATCAT
CATAGATGTTTTGTACTTGCTTTGTATTTAAATATTTGTTGTTGAAAATAATACAGATAC
CCCAACTATAAATATTATGGTATAGAGGAAGTAGTTAATAAACATGTCATGCTCTTGAAA
GAATAGCATCAAAGAACATGAAATAAATCCAGAAAATACGAAAGCACCTGTGTCATGTCT
ATGACTTAATCCAGATGAAATGATTCCATCACAAGGAACCTAACCATCCCAACTGAGCTT
AGTTCGTTCTGGCAACTGCAGATGCAAGCCAAGAATAGCTTAAAGTCCCACTCCCCCCTT
TTACGGCAAGTGGGTATTAGATTAGGCCTCATTTGGTTCATAGAATAGAAAAATAATACG
AATAGATAAGTCATAAAAGTTAAGATGCATGTATCTTAAATCCTTTTGTTCGGAACTTGT
GGGTGCTTGTAACTTTTTTTTTTAATAAAAATGGCTGCATGCATCGTATTGATGCAGAGG
ATGAAGGGACTTCTCCTTTAAAAAAAAATCTTAAATCCTTTTAATATGATTAAAAGAAGA
TGCTTTTTAGTTTTCATTATATTTTTTTTCATTAAATCTAGACTAATGTTTATTTTATTT
TCTTATAAAATGTGAAGGATAGGAAGAGTTCCTTCATAGTAATAGGATTCTACTCCTACC
AACCAAAGGGCTTTAAATGTTTTTTTTTTCCAAAGAAATCTTATCCTATGAAATTCATAC
AAGATTCCTCCAAACCAAAGGAGTACAGCCAACCGGGCTTTGCTTGGAGATGCATGATCG
CGGGTCAATTTGCAAGCGCAGGAACCTCGTGGGCACGCGTCCACCCGGCTGGCTAAAAAT
AAGCCATCAGCGTCCGGTTTCATGAATCTCACGTGCCCGGCCCAGACTTTGTGGCCACAT
CTCCCCGCAAGTCAAATCACACGCCGTGTAAACTGGACCTCCCGGCCGTGTTGCCCAGGG
CTCCTGTTCGGGAACCTGCTTCAGTTTCGACAGCTAAAAAATTGAAAATGAATCTCGAAA
AGAGAAGAAGCACACAACACATTCATCAACTTGATGCCCGACCTCAGTATTCAGGAACGG
GAGAGCAAATGGCGCCAGCAAGACAAGAGAGGGTCGTACATAAAAGATGAGATTATTCTC
GCGCCATCCGTCCGAAAGAACAAACACATCATTCAACCAGCGTGAAGCCATTCCTGACGT
ACTGCAGACAAGGGAACGGCAGCAGGTCCAGCACCCGCTCGATCATGCCCGACCTCGACA
GAAGCTTGCTGAGAACAAAGTCCCGACGGCTATGCCCCACCGGGGCGCCACGCAGCATCG
CCTCGTCGCGGCAGGCGACCATCGTGATGTTGCAGAGCCAGGGGGAGGCCGTCGTGAAGG
CCAGCCCGAAGTGCCGCTTGTAGGCCCGGCAGACGTGGGAGACGTACCTGCCCATGGGGA
GCACGTTCTCGAAGGGGGCCTCGTCGTCGACGTCGGGGGACGACGCCTCCGAGTCGGAGT
GCAGGTTCACCACCACGGTGCCGTGCACAGGGTGGACCTTCTCCTCCAGGTTCCTCAGGA
ACGGCCCGTCGGCGTCCCAGAGCTTGCGGGGGAATATGTCGTTCCCGTCGTACGCGTCGA
TGAAGACCAGGTCGTAGATGTTGCTGTCGCCGGCGATGAAGTCTTCCGCGTCTTCTATGT
GGAGGGAAATGCGGTCGTGGACGCCGTTCCATAGCAGCTCGTCGCCGTCGGCGGGCTGCA
TGGTGTGGTCTGATAGCCCTTTCGCGCATGAGGCGGGAAAGCCCATGGATTCGACCGAGG
CTGAAACGACGACTGGGTCGATCTCCACAATGTGGACATCAGCACCTGAAACAGATGAAA
TATGTTCGAGTGTTTAGGTGAGGTGGACAGCTGCAGAGTTAAGGATCTACATGTAGAACT
ACATTGGCAATTCTATGTATGTTAGACCCAATGTACCATCAAATGAGCTGAATCCAATTA
TTCAAAACTGGGTGTGCATTTGCCCATCTAAAATTTGTTGCGCATTCACGTGCAAGTCAT
TACTTATTAGTATTGCACTTTTGCAGTTAAGCAAGCCAAGACAGGTATAGTTTCCAACTG
ACCAACAAAGACCAGAAGGTAATACCTTAATGCCAAGTTCACTCTACAGGAAACAAAGCA
TGAGCAAAACAAATAAAAATCCAGTAACAATCTATCCAGTAATAAACATTAGTAAAGCCT
GTGGTAGTACATACCTCTGAATTTACTAGCCAAAAACAATGGTATGCTGCCGCCACCATG
ACCGATACAGAGAATTTTCATAGTGTTCGGCTCAGAAACTGCTCGAGGGAGATCATAAGA
ACAACTAGGGAGTGCTGTCAACCCTGCTGATACCATGCTCTTGACATCTGCAAATAATGA
CGGTCAGATGATATTATCAAACACTCAAGTGCCAATGAAATTGCTTTAGCTTTGCAAATA
ACAGTTCAGTGCACATCTAGCAGAAAATCATCTTGTGATCTCGATGGCATATAAAACTTG
CAGCTAAGAAATAATCGAGGAATCATGTTTACTGATGTCTTTTGACCTGTAAGTGTGTGT
ATACTTGATTTGTATGTAAGAAGCCATCTTTCTAAGTTATGCTTATGCATTAACAGATGC
AAAATGAATAAAAATAAATAAACACCAGCATGGATATATTATCATCAATCAGCATTGGTG
TGAACACAGTACAAGTGAACTCACAAGGAACAGCTAAACAATTGGGTTGCTGCATTGAGT
ATAATGCTCTATCGCCCCCAGACCGGTAACACGCCATTACTTTTGCAGTACTTTGCCGTG
TATGATCGTTAAAGCGCATTACTCGCCACTGGTAGCCTAGTATCTTAAACTGGTCAGCAC
CACTTGATTCTGGGTACATTGCCAAGTTTCTTTCTTGAAGCCATCTCTCCATCACCGGCC
ACTGATCGCTGGCCTGTCACAACATTAACAATTTGTATTTTTGTATGAGTCCAAAATAGA
TTGAGCTAAAATCTTCAAAACATCATTTATATTTACAGCGTGATAAATCACAAGACACAC
AAATGATCATAGTGACACATAATCGGAGTGATTATCATGATAAGTAGCATATGAAAATTT
AAGTTGGACAAAATGTAGAGTAGTACCCCCTCCGATCCAAATTAATTGTCGCAGCTCTAG
TCTCCGACCCAAATTAATCTTCGCAGCTCTAGTTTACAAAGTTGTAGTACTGGAGTTGCC
ACAATTAATTTGGATCGGAGGGAGTAGCATTTTGCTCAATGTGGCCATGTCCTAAATCGC
AAGAGGTGGAATTGCATCAAAAGAACCCTTTTTGCCTGGAACCAGCATGGATCTAAACGA
AAAATTTGATGTCTAAGTTTTAGTATGGATAATACAACTTCTAGTGGCTCCAATCAGCAA
ACATGTTCCCCTCGTTAGCATCTGTAAACACTGGCAGGAGACGACGAGCTGTTCATCTCC
ATTCCGTCAAGCAAGAAATAGACCAAGAGGGGAGTAGGGAGAGGGTAAGGGGAAGCTACC
GGTATGGAGGCTGGGTATGCGGCGACGGAGACGACGCCATTGCCGTGCTCGGAGTGGCGG
CGGAAGACGGTGTGAGCTCCGTCGCCGGGCCCGTCGTCCTCGCCCCACCACTCCTTGTAG
TAGGACCAGTCCCCCTCGTCGAGGGGAGGCTTCCTCCACGCGCCAGCCGCTGCTGAGTAC
GACGCCACCGACAGCCGCCGGATGGCGCCGCCGGCGCACCTTGACGCCGCCGCCCGCAAC
ATGGTTTGCCCTGTTCCCGCTGAGCCCGCGGGTGTGCTTTGTGGGCTGTGGCTTGCGGCC
TACGAGCAAAAGGGCAGAAGCCCGCTTAAGCCCAGAACACAGCCACGAACTAGGGAGTCG
GCTCAGATGACAACAATGAAAATCCTAAAAAAAAAAAGACCGCTGCTACGGATCAGGCGG
ATGATTCCGCCTAGCCAGCCGTTAGATCTGGCGCTAGGGGACGTCGGATCTGGCGCTGCA
TCCATAGCTGCAGGTGTTGTCCATGGCAACATTAAACATGAGCAAAAAGCTTCATAGCAA
CACCAACAGCGAGATGAAGCTGCAACGGAGCACCGACGCCGCAGGTGAAGCTCCAGTGCA
GCACCGAGGAAGCTCTATTGCAACTTCGATGGAGCTTCAACGCAACACCGACGCTCCAAC
CAAGCTCCATTGCAGCCCCGACGAAGCTCCAATGCAGCGCTGACGGGTCCGATGAAGCTC
CATCGCAACTCCGGCCGAGCTCCATTGAAGCCCTGACGGAGCTCCAACGCAACGTCGACG
GCTTCGACGAAGCATGGCAACTCCGACCGTGCTCCATTGCAGCCCCCGCGGAGCTGCAAC
CGCGCTCCATTGCAGCCACGACGGGCTCCATTGCAGCCCGCGTTGCCGTCCCAGCGAAGC
TCAGTTGAGCCACGACGGTGTTGTGCAGCTCTCTGCTTGCAGCAATGGCGGAGATCCTCA
ATGGATTTCCGGTCATGGGGGATGGGGAGGGGGAGCA