morexGenes - Barley RNA-seq Database

Contig contig_50184
Source Contig contig_50184
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_50184 (8429 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_50184

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_65440	5	2941 bp	MLOC_65440.2	Available	Available	LOC_Os09g38910.1, FRAME:+1, EVALUE:0.0, 13109.m03890 protein OsWAK92 - OsWAK receptor-like protein kinase, expressed
MLOC_65441	1	462 bp	AK376183	Not available	Available	None
CDS Structure of MLOC_65440

CDS Structure of MLOC_65441

Contig Sequence (8429 bp)

>contig_50184 8429 assembly3_WGSMorex_rbca.fasta
AATTTCGATTTGGTTGTAAAACTATTTTATTTAGAGACAATTTCGATTGGGGTTGATGTG
CAAACTTGTTTTGATACGAAAATATGGACATTTTAGGCCCTGGCGGACAGGATGGGTCAA
AAGGATGCGGCCACACGATGGGCGCACGACAACCGCATCCGAGGACAGGCCCGGACACGA
CCCCATCGCCCTACCCAAACAGACAGAATCCGTGCAAAACGGACGTCCGTTTGGGGTCGC
GCGGTGGAGTTGGCCTAAGCTAGCTGTAGGCAAGAGAACCACACTCGCCAGCCCCATGGC
CATAGCCTCAACAGCGGTGGTGCTCGTGCTCGTGCTCGTGCTAGCGATCGCGGCCGCGGC
AGAGACTCCGGCGCCGACAGGGCCGGCCGGCTGCGCCACGAGCTGCGGGGACGTGGGTGT
GTTGTACCCCTTCTCCCGTCGACACCCGCCTTCTTCCGCCGCCGTGGCAGCTCCTGGATG
TCGAGGCGGATGGAGACAACGTCGTCCTCCTCGTCCGGCTCCCGCTCCCGCTCCTCCGGG
TCGCCGGCGCTCCTCCCCGCCAAGTCGTAGCCGCAGGAGACGCCGCTAGGGGTGGCGCAC
GTGCATCGGCGGCATCGTCATCAACGTCCGGGGGGAGATGGAACGCTTCCTCCCGCCTCG
TCAAGCCGAAGACGAAGCCGGGACTCCTCCCCGTCTAGCAGGAGCACCTGGACATGGCCG
CCGTCGACGTGACCGCCCTCAAATGGGTGCGGGACGACTACGTCCGGGGGGAGATGGAAC
GCCAGCGTTGCGCCCTCGAGGGGATCGTCCCCCGACGCTGCGACCGCGGGGAGGGCGACA
TCGTCATCCTCGACGACAGCGACGAGGAGGCGTCGGGGCCTTCCAACCCCGTTCGCCACG
GCGACCCAGGGCAAGGGTGCAGCAAGGGTGGCGGCAAAGCGCACGACGACGACGACGGTG
ATTACACCAATTTCTATAAGTTTCTCGGCATGTAGAAGGCGGCGGCGGCGGCGGATGGCC
GCGACGTAATTGAATCATGTTTTTTATTTCATTTTGTACAAATTTCAATGAAAAACTATG
AATTTCCTTTGAATTTGAGTCGATTTTGACCGAATTTGGATCGAGCTTTTTCTCTCCAAA
AAACAGTTCGGACGACCTTTTTTTTGGGGGGGGGGCGACTGGGAACCCACGTCCCCATGT
CGTTTTTTTGCCGGCGCGCCCCGAGACGATGCTATTTCACGCCCCTGAAGCGCCGAACGG
GTGGAGATGCTCTAAGAAATTATTTGTCACACTTTTTATATGTGTGCGATGTGAGATCCT
AATGTGGCAGAAGAACATCTTGCCTAAGATGAGACTTAAACCAAACAATCTTTTAAGTTG
ATCAAAAGTTTGTAACCTTAGGTGTGAGTGTGACAATTCAAGTCAATCTTAGTCACAAAT
TAAACAGCCCCGAAACTCCTAGATCCCCTGCTGGTCCACCCTGTCTCCACCACTGAGGAT
GACGCGCCGAATTCTGACATTCCGGGAAGTTGCGTGATTCAAGATGAAACAAAATTCCTG
CACTTGTTCACTCTTGACGCGCTGGGTTGACTTGCCGTGCACAGTCTCTCGCTTTAGCCT
TGAAATACAGTGAGTAGATCTACTAGCAGTATACTAGGGAAGTACCCAGCAGGTAAGAGA
ACCACACTCGCCAGCCCGATGGCCATAGCCTCAGCAGCTGTGGTGCTCGTGCTAGCGATC
GCGGCCGCGGCAGCGGCAGAGACTCCGGCGCCGACAGGGCTGGCCGGCTGCGTCACGAGC
TGCGGGGACGTGAGCGTGCCGTACCCCTTTGGCTTCGGCCCGCCGCACTGCCACTGGCCG
GGGCTCAACCTCACCTGCGACACGAGCGGCCCGCGGCCCCCGCGGCTGCTCCTCGGCGAC
GGCGCGCTCCGGGTCGCCGCCATCTCCCTCCGGAACGCCACGGTCCGCGTGGTGCGCACG
GGCTCCATCGTCGACAGCGCCGGCGTCACCTCCGACCGCAACGTCTCCTTCGGCGGCGGC
TTCGTGGGCGCCGGGTACATGCTGTCCAACGGCAACGAGCTCGTGCTCTCCGGGTGCAAC
CTGCTGGCCACGCTGGTGGAGGACCTCGGGGTGGGGCCCGGCAGGTCGGGCATCATCAGC
GGCTGCGCCTCCTTCTGCTCCTTCCGCAACAAGAAGGTGGACAGCGTCGGCCAGCCGGCC
GGCAAGTACTGCTCCGGCATGGCGTGCTGCCAGGCGCCCATCAACTACCACAGCTCGCCC
ACCGGAGTGCACCTCCGGTGGCTGGACGCCGGGAACCACAGCGAGGCGCTGACGTTCCTG
CCCACCTACGTGTTCGTGGCGGAGGAGGGGTGGTTCGACCGGAGGCCGCTGGCTGACGAG
CTGCTGAGCGTGAGGCGGAGCCCGTCGGAGGCGGCGCTGGAGGTTCCCCTCGTCCTCCTG
TGGGCCGTCAAGCAGGGCCTTCCGCCGCTGCCGAGCTTGACGGCCAACTCGTCCACCGCT
TGCTCCGACGACACGCACCGCATGCTCTGCAAGAGCGGGCACAGCGTGTGCGCGGCCGGA
AACCTCGGCTACACGTGCCAATGTCGAGACGGCTACGACGGCAACCCCTACCTCACCCAT
GGGTGCCAAGGTTAGTTACTCCTACTCTACTGTACACTTGCAATATATCGGCACGTCAAC
CATAATTTCTCAACCTTTTGGATTCAACGTCCACTTCCTTCGTTCCTACATATAAGTAGA
TTTTAATAAAGACTACGATTTCGAAACAAAATGAATGACTCCATATATTATTTTCAAAAT
CTATTATTTAAAATATTAATGTTTAGTATAAAAAAACTTTACTGTAATATTATAAAATAT
TTTTATAATAACGTGTGGGGCATCATCTGGTTCATGAAACGCGCATATTCACCTGCCATC
ACGGTACTCACGTTTTTTTTATTTGTTTCTTTGACTGTATAAAATTTGACTCGGTTTTAT
TACTGTATGAAATTTGACTCAGTAATAAACATGGGTTTCTGCGTCTTGTGATGCAGAGGC
CGGTCTCCGAAGAAAAAAACGACATTCATGTGTCATTGTTTAAAATAAGATGATATTTTC
TTTTAATCTTAATTTTGTCTGTCTATGCTTATATCAGTTGTAGACAGTACTGCTTATTAA
GCAAATATATGGTCCAACTTTGACCCAAAATGTGAGTAGAGCGGCTATTTCTCGCTTGCT
AGATAATTCTGGATGCATTGCATTTATTAGATACAAATACTTTATTACGTTAATATGTGA
TTTATCTATCTATAAAAATGTGATTATATCTGAAAATTATGTTTAACAAATACAAATATG
GATGCTGGCATACAACAAATACGCTGGAAAGCCTCAAATAAATTCAAAAAATGCGAGCAT
CAGTGCAAATCTAGGACTTAAATCCCGGTGGATTGGTCCCACCACAAGGAATCTAACCAT
CTGAGATATGCTCGGTTCATAAATATTCTCTTCGTCTGAAAATACTTGTTGGAAAAATTG
ATGTATTTAGACGTAGCTCTAGATACATCCATTTCTCCGATAATTTTTTTCGGACAGAGG
GAGTACAATTTTACTTGATAAATGCCGATTTAGTAAGTATTTATTTACTTATCAAAAATA
CATAACTTAATTTACTAAATCAATAAGGGATGACGCGATTGAAATGGTTTTCAGAAGAAC
AAAATTGATTAAAAAAATCACAAACGAGTGAAAACTTCACAATGGAGAGAAAATAATGTA
TGTAATATTAGATAAATTGCGAAAGAACAACAAACCTTAACTTTAGTTTTTTTGGGATCT
TACTTTTTAAAAATATTCAAAAGGTCAAAAAATATTTGGGATTTTAAAAAAATCTTTGGT
ATTTCTAAAAAATGTTCATGTTATGCAAAAAAAGTTATTGGTTTCATTTTCATTTTTTTC
TTTTCCTGTTCCTTTAGTTTGACATTTTCTAGTTTTTGTTTTGAATAAAAAAAAAGTTCT
CGTGTTCACAATTTATATTTAAATGTTCATGCGTCAAAATAAGGAATTGTAAAAAATGTT
CTTGCTTTCAAAATGTGTTCATATATTCAAAAATGGTCTAATGGCAGTGACATCAAAATT
TGAATTGCAGATCATTTTCTCTTTCAAATATGTAATCTAGAATTAGTATGTTCCCAAAAT
CAAAGTTCAAACAAATGAACGCCAGTTATATTGTTATAAATTGACCAATCAATAATGCAA
GTGCCCACAGACTAACACTTGTATGTTTTCAAGGTCTTTATGGTGTGCTAAATAATGAAT
TTTTTTCATAGATGTCAACGAGTGTGAGCAGCCACATGACCATGGGTGCTTCGGCAAATG
TATCAACACAATCGGAGGGTACAAATGTCAGTGCCCACAAGGGACACATGGAAACTACAC
CATCAAGGATGGTTGCATCAAGTCTGCGGCTACAGGTTAGTACGTACTCTATGTTTCAAC
TTCTTCAACTTCATTGGTATCACTAGAAAATTAGTATTTCTTATTTGGTTGTACAGTACA
CTTTGTTATTTCATTTGACCATTAGTCCTTTTAGGTATTTGACATTTTTATACAAAATAA
ATTAGGGGCATGTCAAAGTATATAATAGCATACTAAAATAGGGTTACAAGAATTTTCTTA
CAAGATGAGGGTCTAGATTATTGAAAAATATATTCTTTAAATAAACGTAGATAGTTTTTG
TGCATCCAACTTGTCTCCATAACAGAAACAAATATAGCCAGTTATGAGGCTAATCTTCCA
TGTAATTCTCTAGGAACTCGTGTTCTCTAAGATTTTGCTATTGCATGGTTTCCTATATTA
CGCCATACATTAAGGGATATTTCAAGAAAAATGTTACTGAGAAATTACATTTTGCATCAA
ATATACATTACTTGGCCGAGTGGCCCATGCAAGCTAGTGGTCTTATACACCTTAAGAGCG
TGCACAATGAAGATGCATAAGCACAAGTGTGTAAAATAAAGTGAGGCCATATTACGACAT
CATTAATCATATGCATAATAGTTAACCTCTTCAATGTAGATTGGTGGTTAGGTATGCTCC
TTTGTTAGCACACCATAAGCACCTATAGTGAACTTAGGCATGTCTCCTTATAAGCACATA
TGTGTATGATATGAGAAATAAAACCTTTTCGGGTACAAATATATTTTCCATGTGAATTTC
AAAACAAAAGTTATTTTCATGTTGGGAAAGATACATACGTTTAAAAATCCGGTCTCATCG
GGTATAATCCCATAAAACTACATTTTCTCACACATTTTAACCAATCAATACAACCTTGTA
GGCCAGCTTTTGCTAAAGAACAAGAAACCTATTAAAATTTTGCTTCAGAGATGAAACTTT
GGATATATAACCACATGGCACACATGGTATGCAACTGAAATTTAATGAGAAAAAGTTGGG
CATATTGGGAAGGCCTTGATACTTCAAATAAGAATAATGTGATAAAAGATCGATTTATAA
AAAGCGAGACATGCTCATTGGACCCTATTGATTCCATAGGTAAAGGCATTGTCTTTATGC
ATGCCATAATATAAAATAAGATTTTGCTACATGTTCTAATTATATGAGTTTACAATTACG
AATATTCTTTATTATTTGAGGCTCAGCGGGTAAAGTTTTCATTCTTGTTACACACTATAA
TCAAGTATTGCAATCAAATATATATGTATTAGGAAAATAACTAATTTTGTGTATGCTAGA
ACAGAATTTTTTGACTTGCTAAGGATCTAGTTCAGCGCATACACCATATATGTCTCTTAA
AAGGTTATGATTGTACTCGCTACTCTGATTTCATTTCATGTATTTCCTTCTAAATATATA
CTTATAGGGTTTTGGTAAGAAAATACTTGTTAATGTTGACTTCAAGTTCTCAGTATTGAG
AGTAATATTAATATTACCCCACACATATCCAGGAACAAGCATTGGTATAGGAGTTGGCAG
TGCAGTAGGATTTATGCTTTTGGTTCTCGGGGCAATCTTCATGGTCCAAAGGTTTCAACA
TAAGAGAGAGATGTTGTTGAAACAAAAGTTTTTCAAGCAAAATCGTGGACAGTTGTTGCA
ACAATTAGTCTCCCCAAGGACTGACATTGCAGAAAGGATGATCATTCCAGTTGACGAACT
TGCAAAGGCAACCAACAACTTTGACAAAGCACGTGAGCTTGGTGGTGGAGGCCACGGTAC
AGTCTACAAAGGGATTTTATCAGACCTACATGTTGTGGCCATTAAGAAGTCAAAGATCAC
AGTACAAAAAGAGATAGATGAGTTCATAAATGAGGTAGCCATCCTGTCACAGATCAATCA
CAGGAACGTAGTGAAGCTTATTGGATGCTGCCTAGAGACGGAGGTACCATTGCTGGTTTA
TGAGTTTATTTCTAGTGGGACCCTCTATGACCATCTCCATGTTGAAGGGTCAAAATCCCT
CCCATGGGTAACTAGGTTTAGGATTGCAACAGAAATTGCAAGTGCTCTTGCATATCTTCA
CTCATCAGTTTCAATCCCAATCATCCATAGAGATATCAAGTCTAGTAACATACTTCTGGA
TGAATCTATGACATCGAAGGTGTCGGACTTTGGAGCTTCAAGATACATTCCAACAGATAA
AACAGGATTAACAACAATGGTTCAAGGAACAATTGGATACTTGGATCCTATGTACTTTTA
CACCGGCCGCCTCACAGAGAAAAGTGATGTGTATAGCTTTGGTGTCATTCTCGTCGAACT
GCTAACAAGGAAGAAACCATTTTCGTATTTCTTCCTTGATGGAGATGGTCTTGTTGCCCA
TTTTGTCAAGTTGCTTGCTGAAAAAATGTTGGTCCAGATACTAGATCCGCAGGTCATAGA
GGAGGGAGGCAAAGAAGTTCATGAACTCTCCATACTTGCAGCATCATGTATAAAGTTAAA
TGCTGAGGACAGGCCTACAATGCGACAGGTGGAACATACACTTGAAGGCCTTGTTGTAAC
CAGGAAATTTTTAGAGAATGACATTACTATGATGAATTGCTCGTTGAATAAAGAAAGAAA
AAGCCCGCTGGAATGCAGCAGAAGACATAGCATGGAAGAGGAAATATTGATGTCTGCAAG
GTACCCTCGGTAGATATGCCAGCTTTGTACCATGTGCATAATCATTGTAGCAGATTACTC
ACTTCTATATTCGCAAAAAAGTAAGGATCACTCACTTGTATTTATGTGTGTTGTTCTAGA
CTAGAACCTCAGTCACTATCGTTTTTTATGTTATGATATGCAATTATCATACTTCTGATT
TTGGCCCGCTGGATAGACAAGCCCAAGGCACCCAGGGCCATGGCGTAGGTCGTGAAGCTA
TATCACTTTGTTTACTGCCAATGTTTTGGTCCGGGGCTTCGCACAATCCTGACTACGCCA
CTGCCTTCATGTTCACTTAACACAAGATCAATGAAGAAGAGAGGGTAGCTCCAGATATGC
CAACCAGGGGCTCTCCTGAGCTCATAGATGGTGCTTCCGCCATATCCACCGTCCACCATG
GACCCTGGAAGTTGTTCAGAGGAAGTTGTCGCTGGCGACGGAGCAAAGCATGGATACAAC
ATATTGCCAAACCATGACATAACACAAGACTACCAAGGATTACTACTACCCTACACAAGG
AAGATCCGATCACCTCCCACAGCCATCACCAGACACAAACTGAATGTGAACGGAAAATCT
GGTAGGATGCCCATATACTTTTTTTGCTTCCGTCGAGAAACCCACGCACGCACGGACCAG
TTGTACTTGTATTGCTTACAATCACATTACACGACGCGGTTACAACATTCGTTATACGAG
CAGCGTGTAGCAACTCACTGAGACTAGCGAGACGTGAAGAGATCAAGGGACACCAAACGT
AAGGTAAAACTCTCAGTACGAGATGGTAGGAAAAGTACCCCCCCCCCTGCCCGCCCAAAA
TAAAAAAGGAAAAATGCCGAGTTCGGCAGTTTTCATTCTGGATACTTGAAGCTGATGGTG
TTTAAGGGTGCACACTTTGTAATCGGCGCAAACAGTGCTGATAAGAAATCCGTAATGGAC
GCGAAGTTGTAAACAAGCCCTGCACAAATGTAGTCATCGAGTAGCGTCTTGAGAGTTGAG
AGAGCCTGCGGGTTCCAAATTGACTCACTTTTGGTCTGTGTAGACAGCATCAACGTCATC
CAATTCAAGCAACTTACATACGAGGTCCTTGTTTAGTTCCATGGCCTCGTCATCCACCTG
TGATAAAAAGGTGAAAATGGGTATTGTCATATCTATTTCCATATATATAGTCGTTCAGTA
CATGGAAAGAGTCCGTAAAAGGAGATCTAAAGGATTGGAGCATCACCAAAGAACTAGTCA
TGGATAGGGGTGCGTGGAAGCTTGCTATC