Contig Data
morexGenes
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Map Locations of contig_50098 (7659 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_50098

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65378 2 1661 bp MLOC_65378.1 Available Available LOC_Os08g06100.1, FRAME:+2, EVALUE:0.0, 13108.m00605 protein O-methyltransferase, putative, expressed





CDS Structure of MLOC_65378






Contig Sequence (7659 bp)

>contig_50098 7659 assembly3_WGSMorex_rbca.fasta
GTTTAATAAGCCTCCCAACATTGCCTTGAAAACCTTCAACTGTTCTACAACCTNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTAACCACGTGTTAGCGTTGCTAGTTGTAGGTGC
AGTGGCTTCGATGTGGTTACATGGGTTCGTTGTTATATCACCATATTATTGATAATTATT
TAACTGGACCTATATAGTTAGTAAAAGGTGGAAGGCTCGAATTTCTAGCCTGGTGTTTTG
TCCACCTTTGTCGCCTTAGTTTGGGCTACCAGTGTTATATTCCATATTTGAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGGGACCCCCTTGATAATTCGTTTGATTATCAGTAGTTCAT
GGTGGGGTTATGTGTGACATAAGTAGGTGTTCAAGAGCATTCATTTGATCATGAGTAGTT
CACGTCTGCAATGCGTAGATCATCCCCCTCTTTTATTCTTGTACTCCCAAGTTAGCCACC
TCCAATAAATACTTAGTCGGTTGCTGCAGCCTTACCACTTAACCATACCTTACCCATCAA
GCTTTGTTAGTCTTGATACCTTCGGAAATGAGNNTGCTGAGTCCGTGTGGCTCACAAATT
ACTACAACACCAGTTGTAGGTACAGGTAAAGAGTTACTTTCACGTGAGCGCGCGGGTTGT
GCTATTTGGAGTTTCTCCTTCTTNNNNNNNNNNNATCTAGGATGGGTTCCAGGTCGTCAG
CCTGGGATAGCAAGGATAGATAGCATCTTGGACGTTACAATTGCTTCGCAATAGGTAGCT
ATTGAGGTATCAAAGCGCGAAATGCAGTCGACATTGCCCCTCAAGACTTGCTAGCATCCA
TGTTAGTCCACTTCATCGACGCTGCGAAGGGGTTGCAAGGTTCAAGACTCTTTTATGAGC
CCGGAGTCACGCGACATCCCCATATATCACACTCTAAATCAAAACTTCTTGTTGGCTGCT
ATGCTTACCTACTCACTCGTGTCGCTTGCGGATGGGTCCCTCGTGGAGAATCATCTCCAT
CTTGATGTTTTGTTAAAAAATGGCAATGAGCGACATAATGTGGCTACGTCGTCATAGAGC
CACCTAGCATTCATGTTCGTTTAGTGTAGGACCTCGAGGGCTCGAAGTTGTCCCATCCTC
GCGAATTTGTCTCATCCGAGTCGATCCACTAGTCTTCACCTGACGTGTCGGAAGGCATTG
CTAAGATCAGCGCTGAGTGACGTCGACCCGGTTCCCCCTCATGGTCCATCTTCAATGGAT
CTTATCTTATGACACACCCACCAACATTTTGTTGAATGCTTATTTTTCTACTTCAAGCAC
ACTATAAAGAATCAAACCCTACTCATCAACAACAATAATAAGAGTACTCCCTCGTCTAAA
TACATATATGTAACTTGGAGTATATGAAAGGTGATTATAATGATATGGTTTTTATATCAT
ACATCTCATGTATTTCTATTTTTTTGCACGGTAATACATGTCTCATTCATATCATAAAGA
TCAAAGTACAAGTCACATAAGGACGGACACGATAAAAACTGAAAAGATAACAGAACATCA
TTGAGCTTGACACTAACACCCGTCACCTACCTGCAGCACCACCACAATAGACACCAAAGA
AAAGAATAACAAACACCTCCTCCAGTGACGGAACAAGAGGGTGGACAGGGTGGGCCACAG
CCCACCCTGATTCTTTTTCCAATAGCCTTATATCATAGCAAAAATAATAATAAATATTTT
TTTAAAGAAATTTTATGAACAGTTCTGCTATTGACCCACCCTGGCATATTGGGCTGGATC
CGCTACTGACCTCCTCACGTGAGCTCGACGCGGCTCCATCGTTGATATGTAACTTTGTGG
ACCTCCAAGGTGACTCACCAAAAATGAAGCCCTTACCGTTGAACGAATCAGATAGGGGCA
ACACCGGGAAATGCCATCGAACTTCAGATCTGGCACCCCACCACGACTAAGACGTCAAAG
GAGGAAACCATGCATGTCATCCACGAACCCACCACATGTTTCCTCTTCCAGATGTCGTCG
ATGCAGACAACAATCTGCATCCGCTCCTGAACTACCCCCCAAGCTCCACGCCGACGTGGG
GTAAATGTCGTCGCAACGGTGGAGCGCGAGGGCACAGGTCCACCACGAAGATGTCCTCGC
CGCCACGCCATCCTTGCTTGAACAGACCAAATCCATCCCCAACCATAGGACCGATGGCCT
CGTTAGGGAAGGATCCGAAGAATTTTTATTCAGCACCGCCATCCCCACCACCGAAGCCAA
AATGATGAACAACCTAAAAACTAGACTACAAAAACTAAAAACGATTCACGCGCATGAATT
CGACGACCCTCCTCACCACCTACGACCAAAGTCGCCGGTGAAGGGGAGCCGCTAGAGGAT
GACGCTCGAAGTTGGCCTCTCCTAGCGGCGGCTAGGGTTCAAGCCGTGAGGGACGAGAAA
ATCGATCAAACAATGTACAATATTGTTACCAGTGGTCAAAGGCAACCACGAAAAACATAC
CATACCTGGTGTAGGAGTATTTGGATGGAGGCAGTATAACTAACTTTCCAGTGTGCCATA
TTTCTCTTTTTTCATTTTCCTTTTTCTTTTTGAGACAAGACGAAAACCAGTTGGTCTGGT
GCAGTGGTTGGTGAAGCAAGAAAGCCAATTGGTGCGGTGGTTGGTGAAGCCAGAAAGCCC
ATATAACCCTTTTCCCGTCCTCCCTCCAAAGCATTCCTCATCGCTCACACCAAAATCAAC
CACCACCACCAGCAGCAGCTCGGCTCCGGAGAGGCAGAGGCAGAGATGGGCTCCACCGCA
GCGGACATGGCCGCCTCCTCCGACGAGGAGGCGTGCATGTACGCCCTCCAGCTCGTCTCG
TCGTCGATCCTCCCGATGACGCTCAAGAACGCCATCGAGCTGGGCCTCCTCGACACCCTG
GTGGCCGCCGGCGGCAAGCTGCTGACCCCCGCCGAGGTGGCCGCCAAGCTCCCGTCCACG
GCGAACCCCGCCGCGGCGGACATGGTGGACCGCATGCTCCGGCTGCTGGCCTCGTACAAC
GTGGTGTCGTGCACCATGGAGGAGGGCAAGGACGGGCGGCTGTCCCGGCGGTACGGCGCC
GCGCCCGTGTGCAAGTTCCTCACCCCCAACGAGGACGGCGTCTCCATGGCGGCGCTCGCG
CTCATGAACCAGGACAAGGTCCTCATGGAGAGCTGGTGAGCTAGATCGATCACTCCATCA
TCCCCTGTTTCTTCCATGTTTTGCCCGTTTGCTGTGGCTGGCTATCATGCGGGGGCACCC
ACTCGGCAGCCGGCAGCCGGCAGCATAGCTCTTTCTCTTTAACAAATTGAGCTCCAGCAG
CAGGTAATAAATACTAGGAGTAGTAGTAAGTAGGAGTACTAAAGTTAGCACGAGATAGAG
AAGCTCCAAGAGTCCATCTAGAAGCCGAGAGATTACGTATCAAATACGGCAATCAGCTTC
AGAAGCAGTCAAGCAGAACCGAACCGCATGGCGATGGATTCCTTGTAGTAATAGTCAACC
ACCAATGGACAATTTTTGTTTTCGAAACGGACAATGGACGAATTTTGGTTTTTCATGTTT
AAAAAAAGAGGACTTTTCAAGTTAAAAACAAGGACTTTTAAGCCGATGATATAGCAACTC
TTTTGTCTCTTTTCAGACAGAAGCATCTCCATGTGTCAAAAGATGTGGCAGGCATTGATT
TAAACACTCCCTGGTCCCTGACATCTACTGTATATTAATGGTCGCTGACTTAGTATAAAC
TTGGATCAAAGGGAGTTGCAATGATATGCTCTCATGGAAATGAGCTGTTGTAATAAAATG
TGTGTGTGAATGTTGTTTTCAATTTCAGGTACTATCTGAAGGACGCTGTCCTTGACGGCG
GCATCCCGTTCAACAAGGCGTACGGGATGTCCGCGTTCGAATACCACGGCACGGACCCGC
GCTTCAACCGCGTGTTCAACGAAGGGATGAAGAACCACTCCATCATCATCACCAAGAAGC
TCCTCGAGGTGTACAAGGGCTTCGAGGGCCTCGGCACCATCGTCGACGTGGGCGGCGGCG
TGGGCGCCACCGTGGGCGCCATCACCGCCGCCTACCCGGCCATCAAGGGCATCAACTTCG
ACCTCCCCCACGTCATCTCCGAGGCGCCGCCGTTCCCGGGCGTCACCCACGTCGGCGGCG
ACATGTTCCAGAAGGTGCCCTCGGGCGACGCCATCCTCATGAAGTGGATCCTCCACGACT
GGAGCGACGAGCACTGCGCGACGCTGCTCAAGAACTGCTACGACGCGCTGCCGGCGCACG
GCAAGGTGGTGCTCGTGGAGTGCATCCTGCCGGTGAACCCGGAGGCCACGCCCAAGGCGC
AGGGGGTGTTCCACGTCGACATGATCATGCTCGCGCACAACCCCGGCGGCAGGGAGAGGT
ACGAGAGGGAGTTCGAGGCCCTGGCCAAGGGCGCCGGCTTCGCAGCCATGAAGACCACCT
ACATCTACGCCAACGCATTTGCCATCGAGTTCACCAAGTAGATCCATGGCAACCGCCCAC
CGATCGGAGACCATCTTCCTCCTGCTCGCTGGCGCTGCGCTGCTGCGTCAACCTGCATAT
GTACTTTGGCTTGGTTTTCCTCCCTCTGTTTCCCTGATTTTGTCATGCTAGCTCTGAATC
ATTCTGAATTCTACTGGTTGTGTCGTCCATCGTCTATCCGAAATGTACTATTAATAGTGC
TGCTCTTAAAGGATGCATGTGGTGCAATGACATGATTTCTGTCCTCTGTTGATTATACCA
ATATATGAAGTGAAGTGTTATTGATCTTCCTCTGTAAAAAAAATGTCCGTGCACTGACTC
GCGAATGTTTTAATGCTCAGATAGATCCTCTGATGGTATATTCATACGACAATGGTAGGT
GGAGGCACCCAGCTTGTAGGCGCAATCATTGAAGAGAAGGAATAGAAAGAACCTCTGGAT
TTCGACGAGATGAACGGCCGAGAGTTGCCGCTCTGGATTTCGTCGTCAGAAAATCAGGAT
CTTGCAAACGATAATTATGATCGAGTAGGAAGTGGATCATGTCACCGTTGCGTAAAACCT
ACGCCTAGCCAGTGGTGGTGTTATCGCTATCCGTCAAGTCGAGTCTCATACCGGTCATCG
TTCAGGTCAGTCAGCTCAATAAAACATATGACGTGTAAAGCAAATTCATCCAACAACTCG
CCGCAGAATAACTGAACCAGAACGGCTCGCTCTAGAAGAATAGAGATGCCAAAAAAAACT
GTTTTCAACAAAGCAACCACTTTTATTTTTTCAGAGATGAAGCAAAGCAACGTCAGCTGG
CGTTGTTTTGTTTTTTGTTTTTTTGTTTTTTTTTGTCAAATGGCTAGCGTGAGGTGGGCA
TGTTAGGCGATGTTTGGACATCCTGGTCAGCAACGTCAGGCGGTGTTATTTAGATTTTGA
AGGTAAGGCTCTGTTTGAAACCATAATATATTATGATAATCTGGATTATAAAGATAAATT
ATATAATCTGGTTTATAAAAATAATCTAGGTGGGCATATTTGGATTATATAAATTGCAAT
CCAAGTTTTACATTGCATAATGACCTGTCTACCCTTTACTTTTTTTAAAAAAAAGAGGAG
GATGGCCGTGGCAGGAATGTAATTATCTCCAACTTTACAAGGGTAATGGGTCATTAGTAA
TTCATAATCTGATTTTAGCTGGGGTAGAGTAGATTGTGAGTTTTTAATAATCTATCTATC
TAGTTTTTATAATCTACATCATAATCCGTCATCTTTGGAGACATAATAGATTATAAAAAC
TGGATTATATAATCTGAGTGGTCCCAAACAGGGCCTAAATTATATAATCTAGTTTATAAA
AATAATCTAGGTGGACATGTTTGGAGGTCAGGTTATATAAACTGTAATCCAGATTTTATA
TTGCATAATGACCCGTCTGCCCTTTGTTTTTTTGATAAAGAGGAGGGTGACAGCTGCAGG
AATGTAATTATCTCCAATTTTACAAGGGTAATGGGTCATTNNNNNNNNATAATCTGATTT
TAGCTGGGGTAAAGTAGATTGTGAGTTTTTAATAATATGTCCATCTAGTTTTTATAATCA
ACACCATAATATGTCATGTTTGAAGACATAATAGATTATAAAAATTGAATTATATAATCT
AAGTAGTTCCAGGCCCTTATTAAGAGCATCTCTAACACATCCCCGGAGCCAAACCGGGTC
CTGCATAAATCGTTGACAGGATCCAGTAAATATTTTTTGTAGGACGCCTCCCTCTCCACA
AGAACAAATACTATAAATCCATATTGTAAATTCAAACAAAGTAGTTCGTGCTAAAGAGAG
TTCGCCCGAGTTCATCGCGAAGACATATCATAGCATAGTAGTTCATCACACGCATAGGAG
AGTTTTAGTACAAATCATAATTATACATAAATAAAACGGAATTTAAAAACCTAGATATAG
TCGTTGTTGGACTTGTCGTCGCTGTCGGAGTCGGTGGCGTCGATGGGCGACGACTCGTCG
ACGTGCACGATATAATACATCAGGGTGGAGCAGAATGTGCCCTGCAAGTCGAACTCCTCC
CGCAGCGTCGGCAGCCTCACGACCGCAGCCACATCGTCGGCTTCGGCCGCCTCCTTCGCG
TGGAACCACGCGAGCTCCGCTTGCCTCCGTCGATGCAGCATCGGGTCGAAGATCTCATCG
AGGCGGTGGAAGTTGTCCCACGCCGACGACCTCGAGCCGACGCTGTGGGACTTGGTGCCA
CATCTGCGCAACACCTCCCTCTGCTTCTCCAATATGGGAGGCCAAAGGGCGGAGCCGCCT
ACCTTGCCGTTGTTGCGGCACTTGCAGTCGGCACAACCGTCGCGCCCGCGAAGCTCCCGC
CGCACCCGAGATCCCCGCGCCGACTGAAACCATCACTGCCTTCATGCCCTGCACCTGCGG
AAGCCATCGCCAGGATTCATCGCTGGAGGGGATGTGATTTGTAGTCGGAGGGGAGGAGTT
TGTCATAGAGTAGGCAAGGGGATTTGTGGGACGGGAACCCTAAATCCCTCCTCCGCCTCA
ATATATACCGAAGGTCGGGGCGATTTACATGCCTCCCGCAAAGAAATTACGGATCGGGTC
CCTTTTAGAGTATATGCGTGGGCCGGATTTTTGAACTGTACCATATAACGTCCCGCAAAA
CGCATTTTGCCGGACTGCTAGAGTTGCTCTAAGCGCAGGCTAGGAGAACCAGCACTCACG
AGCCCTGCCTTGCAGACTCTACGATGAGGGAGTGATATATCGCAGCTTGAGAAGCTTCAA
AGGAGGAAGTTTGGATCAGGAAGTTTCTTGATGGACGAGGTGTGGCTGCACAAAAAAACT
GTGCGGGAACGTTGATAACCGACAAGTATATGGGATCGCAATAGTTTTAGAGGGTACAGT
ATTCAACCCACATTTCTAGTTTCAATACAAGGGGAGCCAAATAATATATGCAGGTATTAA
CAGCTGAGTTCTCAATTGAACCACACTTGAAGATTTAGTATTTGCAGCATAGTGATCACT
AACACGGTAATATGATAGTTTTGATAGCAGTGGTAATAGTAGCAGCAGTAACAGTAAGAG
TAGTAGTAGTAATGATAACAGTGATAGCAGTTTTGTAGC