Map Locations of contig_50080 (8598 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_50080

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65361 1 1278 bp MLOC_65361.1 Available Available LOC_Os09g08890.1, FRAME:+1, EVALUE:2e-81, 13109.m00754 protein mitochondrial 60S ribosomal protein L5, putative, expressed
MLOC_65360 10 3015 bp AK375208 Available Available None





CDS Structure of MLOC_65361






CDS Structure of MLOC_65360






Contig Sequence (8598 bp)

>contig_50080 8598 assembly3_WGSMorex_rbca.fasta
GGCGGGGGGGGGGGGCGGGGCGACGCGGCGGCCAAGAAACGGCGGTGCCGCCGTTCCCGC
GAGAAGAGGAGCTCCACGCCGTCCCTCCCGAAGGCCAGGCCAAATCCCCGCCGCCCGACC
ACCGTGATGGCCCCGCCCGCGCCGTGCGTCGCCGACGCCCCGGACGCGCTGCTCGAGGAC
ATCTTCCTCCGCCTCCCGGCCGCCGCCGACCTCGCGCGCGCCTCGGCCGCCTGCCCCTCC
TTCCGCCGCGTCATCGCCGGCCACGCCTTCCTGCGCCGCTACCGCGCCCTCCACACGCCG
CCTCTCGTCGGCATCCTCCACGACCACATACCCTTCGTCCCGGCCCAGCCGCCGCACCCC
TCCGCCGCCCCCGCCCGCTCCTTCGCCGGCTTCGATTTCTCCTGCTCCTCCTTCCTCCCC
TCCGCCGCCGGCCGCACCTGGAGTTCGGTTGACTTCTTTGACGGGCGTGCCCTCATGGCC
GGTGTCCCCGTCGGGAATGGAAGCGGCTTCAAGGTGTACCATGAATTTCTGACCAGGGAC
CTGGCCGTCCCGGAGACCTGAAAGCGCTGGTCCATATACAGGATCTCTTCGACATGGAGA
CTTTCCTTGCGCCCGGCGAGCATGCGGAGGACCCCTTGTCATTCAGGGTGATATGTTTGG
TGCAATGCCGAAGCAATCTGCTGCTTCTGATCTTCTCCTCTTTGGATGGACAGTGGCATG
TTCTTACTTATGACCAATGGGGTGTTTGTGCTACGCTTGCTTCATTTGTGAAGTCTGAGC
CTGGGCTCTCCAGTCGTCAGTTTGTCCACGGATGCTTCTATTGGCGTTTGCATAAGCGGT
GTGAGTTACTTGTGCTTAACTTGCGTGCAATGGAGTTCTCTGCTATCAAATCTAGACAAC
GGAGCGATAGTTTTGTTGTTGTTGAGGCGGCAAAAGGAATGCTCGGGATGCTCACTAAAG
GTTATGGCAATGACCGATGTTGTCTCCAGTATTCCATTCTGACAAATAACCAATGGCACT
TTGAGAAGGTCATCCCGTTGCCAGTAAAGTATGTGAGTCTGGTTGGTGTAGCCGGGGGAT
ACCTGCTCGTATACGCGATGTACGACGCATCTTCACAGGAGAAGATGAAGTTTGGATTCT
TTTCGGTGAACTTGAAGACATTGCAGGTTGAGCTGTTCGCTGCGCTTGGCACACACTCAC
CTAGACGACTATACGCTGGTTTCCCTCCATCATTGTGTGCGCCAACTATATGAAGCGGTG
AGCGTGTGTTATGTACTCTTTGCTTAATTTTATTTAACTTGGTCACAGTGTTATACAACA
AAGAAATAAGGTTCAGGCATTTACTATATGAGTTTGTCTAGTTGTTTGCATCATTTCCAA
TTGATTGTCGTCTCCAATATATTTCCAATTCCTTTATTTTTATATATGGCCTGCGTATAA
GTAGAAATCATCATATTACAACAGCCCCGAGTTTCTGCTCCGAACAACAGTTTTCAAAGA
AATGAGGTAGTTTGGGCAGTTTTTTTTTCTTGTTGTTATTGCAATCCACTGCAGGTTACT
CCATAAATCACTAGTATAAAACACAGACAGTTCATCTAGTAGTCACACATATGAATGTAG
ATTGCCTTGGTCAATCCAGTGGAACTATTAATTTGGGTTGTATGTCTATTGTTCTGCTGT
TGAAAACTGCTGTTATGTTCAGCTGATCTGGACAGTAACTTTATTCTTACAGAGAAAAAT
ATTACCAAGACATAAAACAAAACAGAACAAAAGTTGTACATGTATGCACCACTTAGATTT
TACTTTTGCCTCGTCAGAATTTATTTAAGCAGGTTTCTCAGTTGTAAATGTATCCTTTCT
TCATCTACGCCTTTTTAGCTTCATTATTGCTCTGCATCTGCCTCTTGAAGCTCCTCCACT
CTTGCATCTGCCATAACCTTGTTTTCATTATCATAGGCATGAGGATATTATATTTATTAT
TACTTTCAACTGATCTGGATAAGTTACTTTATTCTCATAAGAAAACATATTACCAAGACA
TAAAACACAAAAGTTTTACCATTGAGCTTTTGCTTTTGTTTTCCTGATCAGAATGTATTT
GATCCGTATCATATCCTTTCTTCATCTGCACCCTTTTTAGCCTCATCATTGTTTCCTCTG
CATCTGCATCTTGCATCTGACACAACCTTGTTTCCCTTCTGAATATTTTTGTTGAATGGA
AACCTCAGCATAGTGCATTCATATCGTGTGAACTCTGGGTTGCATAATCAAATGCACACA
TAGAAATTTCAGCTTGTGTCTTCATGCCATTTGCTCATGAGGATGCTTGCAAAGTAGTAC
ATATTTGAAGGCTTATCCCTGGTTGGTAGGTTCTTTTCAGGTAATACACATCATTACTGT
GCAATGTGATAGGTACCTTCTTGATAATATCCAATGTCGACTTAATGCGTCACATGCTGC
AGCTGATATATTTGCTCATATAGAAAGCTCATGTTGTTTCATCTGTCCACAGATGCTGAT
TCTGTGTCGAAAAAGGAGTTGGTTCCTCGGACCATGTTGTGATCTAGGAAGAGAAGGTGA
CGGGTGGATCAAATGCATTCGCTTGTTCAATGCTTGGTACAGCTCCCGTCGTATAGAAAA
GCTCGCACGCTGATTGGATGTATATATCCGCTTGTCCATGGCTGATCCCATATTGTAAGC
CGTGATTTCTGCCTGTGTGCTATTCTTAGGGTACGATTTCTTTTTCCAGTTGCAGCATTT
TAAGTGTGTTCTAGCTTCTGAACTCTTAGGTACTGATGACTATGTACAAGCTGGTGAATC
TCTGAACATTTTTATTACTGCAATGTTCAAGTCACAATGGAATGGGTGTGGGTAGTCTCT
CCCTGGAGCATCTCCAACAGTTGACCAAAAAAGTTGAAGACCAAATTTTAGGTGTGAAGA
GAGAAGGTTTTTGGTCTCCATAAAATTTCCTGCTTTTCGAGCTGACCAAAAGGTGAAAGA
AGATGTCAATTTCGCCTCATATTTCATGGCAACTTACAATTCAATGTAAAATTATCTATT
TTGACTATTAATATTCACAACTACATCATATTCAATAGAAGCAGAATAAAAAAATAAATC
AACTTTGTGGCAATTCGATGAACACATTGGGTGCCTTGGGCTCACTTTTGCTGAACACGT
TGGGTGCGTTGGGCTCACTTTTGGCCAGTGGAGTGCAACGTCGACGGAAGAAGCACCGGG
TGGCAAGGAATGGTGACGTGAGGGAGACCGGAGGTCAAGGTGTGGCATCCTCGGAGGGGT
GGCCGGAGGCGATTCTCGTTCGCTCTGGGAACCTTGTAAATCTGATATTTCTTGTTTCAC
AGGGTCAGCAGTTTGGCCCGGCGCACCATTTTATTTTGTGACAAGAAAATTTGGTCCCCT
TGTAGACTGGTTTGTTATTGGAGGCTTGGAGACTTTTTCGATCCTAAAAACAAAAAAAAT
AACAGTTGTTTTGTTGTCACAACTATGATTTTCTTGTATGCCGTTGGTCGTTGGAGATGC
TCGATCTTAAGGTGGCAGATTGACCGAAAACATAAGGTTATGATGTACTCCCTCCGTTTT
AAAATATAAGACTTTTTAAAGATTACAATAGGAGACTACATACGGAGCAAAATGNGTGAA
TCTACATTCTAAAATATGTCCGTGTACATCCGTATGTAGTTTATAGTGCAATATCTAAAA
TGTCTTATATTTAGGAACGGAGGAAGTATAAACTATCCACATCATTAATACAAAGATAAA
AAAATATATTTTTCTCAGGCCATATTTGGGGGGAGGTTGGGTCGTAGTGAAAGAAATTTG
AATTGCGAAAGACGTGTGAATTCTAGCCAGGCACATACATATCTCCGCAGATGATAAAAA
AAATGAAGTTGAATTGCCTGGAAAGAATGAAGGGAAATGATTTTGATAATTTTAAGCCGT
GTAAGTTGCTAGTAGCCCTTAGGATTTTGAGAGAAACCGGACTTGACGAATTGCGTGTGT
TTTCGAGGGGAAGAGGGAAAAGGAAGCCCAGCAGAGCCCGCCGTTGTTGGGCTGGCCCAG
CCGCCCCTTGCGACCCTGTGACACGACGACGACACCCATTGTCTTCTCGCCGCCCCCACT
CCCACTCCCAGATCACGCCGCCGCCGCCGCACGGGTCTGGTGGCCATCGCCGCCGCAGAG
GTCAGCGCCCCCACTCTTCCCCGTCTACCGGCGCGCCCCCATTCCTTCTCCCCCTCCCCC
ACGTAGCTCACCTTCTCCCCCTCTCCCTCTGACTGCCGCCGGATGCTGCTCCACCGTCGC
CCCTTCCCCTCCCCCGGTTGCCCAATACCGGCCCCAACTCTCCTCATCCCACGTTTCTCC
CCTCAATGTGCTCCATGGTCTGTCCGTGCATTTCTGAGCTGATTAGGGGCTTCTTTTCAT
CTGGAAGCTGCCGCTGCTGCCAACTACTGTACTTTTACTTGGATTACAAATGATGACCCA
TTGCCCTTCTGATGCGCCTATTTGGCCCATGGTTCCTTTTTACAAATGTTCTTGCATAGT
TGCATATATATGGTCCCATGATAAAACTGGTTGCGTGCAGTTGATGTTCATAAATAAATG
AATGAGGGAGTAGTTTGTTAGAGATTCAAGTGTGTCGGAGGTGCAAGCATGTTTATATCT
CTTAAATGATGGTGTTTTTACTGTTGGGCTAGGCTCATTTATCTGAATGCCATCATTTAT
AAACAGTTTAGGCAACAGTCGGTGTCTAGATTTATATACGTCACCAAGAAAACCGCAAAT
GCTAACACTGCGAGCTGCAGGCTTGGTTGCTGTTCCGTGTACATACATGACCATGGTAGT
TAAATGGTTAGGATTTCTGATCAGCTACGGTCAGATGCTCGAGAGACACGAATCGCCGCA
ACCAGCTTAGGATGAGCAACGCCCCATTTTTTAACTTGTCTACCTTGTTCATGACTGAAA
GCTGTTGCAATACCCATTCCAACCCGCAAGGTCCACGGGGCTCCTCATCACTTTCTCCTC
CTCTCTGTCTCCACAGGTCGCTGCCGCCGAGAAAGCTTAAGCGCAAGCAGCCATGTCCAT
CAGATCTCTCATCGCCGCGTCCAGGTCCGGCCATGCACTCGCCTCTGCCACCATCTCTCA
GGTCAGGCGCCCCTCCCCCGCGTTTCTTTCACCTCTTTCTTTACAACTGAAGGTGGACAC
TGATTCACAACATCTTTCAACTGATCTGATGTGTTTTACTGCGTGTGGTCTGATTGATCA
GGCGGCCTCCAGGGCGCACCAGCACGCTGGCGTGCCTCATCTGCTTTCGAGGCTTGCACC
ACTCGCCCGCGCCTTCAGGTACATCTCTTGTTACCATCTCCAGTCTCTGATGCCAGCCTC
ACTCTTCCTTGCACAAAGAGCTTAATGAGTTGTTCGTTCCATATGTGTGCAGCTCAAGCC
CTGCAGCAGATGATGCCGCTTCAGGTGTCCCTGTCATGGAAGAGCAGGTGTGTTACTCCC
CTCCCTGAATCTCTCATGTTCTGCTAATTGTGTGTGAGTGTAGGGTCCATTTGCATATGA
GTAGCAGCTAGCAGAATACACGTGCTTTGCTGGGCCGGCAAGTGAGGCCCTGGCTGATGT
TTTGTTTAGAACCACTTCAAAATGTTGCTTTAATACTATAATATGTGTATAATTAGCTGA
TATCTCCATATGGAGATAGTTTAGTACAGAGAGAAAATAATACCTCTTTTTCTTGGTCCG
GGTAAATGCGAGTACATTAGATAATTAAAACCGAGGAATTAGAATAGCACCAGAAAACCA
GAATGCTATTGCCAAGGGGAGATTCTGGGTCTATTCTATCCTGGCGATACATTGCATTTG
TTAAATTGAACCACACACCATAATGTGTTAAATTGTACTGCGCTACTTTATGTGTATATA
TAAAGAACTATCCATGAATACATGCATTCTGATCTTGGTAGACATTATATGCCTTGTACT
TCACCAAAAACAGAGCACAACAAACAAGGACTGGGTATTCATGCACGTAGTGGACTGTCT
TTCGAGACAGTATACCACCATCACAACTGGATTAGCATATGCCTTACAGCAGAGAAATTT
TGCACCGATTCTTTATCGCTAGGGCAGTATCAACGTTCATATCGTTGGATCCTGCATCCA
ATAAAAACAGGGAAGAGTGTCAAAAGAGAATAACATGCTATGCGTGCTAACTGACAGTCT
GAATTCTTGCACGTGCCAGATGACTGGCCTGGATAAAAGAAGGGTTTAAAAGTGATGGTA
GAGAAAAGGGAGTAGAAATAGTTCAGTTGATTCAGTGATCATGTATTATAGTTGGTTTCC
GTATCTTTAGCGGTTAGAGGTGACTTTTCCATCAAGTTAATGTAAAATGGAACTGACATC
CAAGTACTAAACTAATTTAGGTCAAGCATGATTGAAACCAGATGTGCTGTATATAACTAC
ATATATAGATTAACAGCAGGAGTTTAAACATTTTCTTGGCCAAAACTTTTGCATAAGATT
GTAAATAGAAAATAAATATGAAAACTCGAACTAAATTCTGCTCGATAGAAACATGCTTCT
ACTGGTTGCCCATATTGTATCTATTGAATCTCATATGGACGGTCTGCTAGTTTAGGAAAC
AGCAGACATTCTGTGGAAAATATCATGTAGAGATGAGGATATCTGAAGAATTGAGCAGAG
ATCAGAAAATATAATATGTGGTGACACATGTCATCAACATATATTCTTCATCTATAACCT
GCATGCAGATTTAACTAAAACTTTTTGTACAAGTATTTAAATGGGGAAGCATAAGAGAAA
AATGTAAGAGGGTTATGCAGTGATGAAGTGCAGTTAATCATGTGATGTTCAATTGATCTA
ATATTGTGATTTGCTGATGATGATGACAACTTCAATTGTAGTGGATTAGTAGTGATGCTT
CTGGTAGAAATTGCTAATAAATAATCTGTTTGTGCAGAAACGGCGGGTGGGCAAAAAGGC
CAAGGGCTCGAAAAGCGGAAAAGCCATGATGTTCCCACTCCATTTCCACTACGAAGATGT
GTTGCGTGAGGATCTGTTGCTCAAACTGAACCACACCAACACCATGGAGGTCCCTGGGTT
GTTTGAGATCAGACTGGTGCCCAAGTCTACCACCGGTGCCAAAATCCAGTTTGGGAAACT
GGCCATGGAGATTCTGTGCGGCCAGAGATGCATACAGGCGGAGCTGCCCGCCCATCTGAA
AGGGAAGGCGACCAATGCATACCTGGGGTCCCAGAAAGACGCCGTGTCCCTTAGGCAGAG
CATCATCCGTGGGCACGGGATGTACAACTTCCTGGTCAGGGTCCTGACAGTGATGTCGAT
GCTGGATTCCAAGGTGGCGTTCGAGCAGGGGAACTGCGTCAAGTTCTTCATGGCGACGGA
GTTCTGTGAGTTCTCCCCGGAGATAGAGGACCATTTCGAGATCTTCGAGACCATTGGAGG
GTTCAACGTGACCATCGTCACCACGGCCTGCTCGAAGGAGGAGACCTCGCTGCTGTGGAG
CGGCTTCTTGCTCAAGGATGAAGGTGAGATCAGCTAAGTCCGATGCTTGAGTGAGATCAC
GTGCGTCGCGCTAAAGACGAAATGAGATGGAAGCTTCTACCGTCTTATGATCCGATCTTT
TCTAGCTAGAGTCGATGACCAGCTTTTCATTATGGAGCAATCTTGTTGGTGGATGGAACT
GAGTTCCTCCTGTTGTGTTTATCTTTAGAAGAGGCTCGTTTTTCTTCGGTATGCAGACAT
TCTCGGTTTCTACGGTGGCAAAAAATTAAATATGGTGATTCATCCTAGTTGTATGCTTGT
AGGCTGTGTGGTCAACCTCTTCGCGTGAAGATTATTAAATAATAATGCAGTTGATTCAAC
CTGCCAGAAATATATGGCTAATTTTATAACTGTAGCAACCTTAGATCAATGTGCATCTAG
ATTTTTCCTCATTATTTTGGTCGCGTACTGTCATGTGGCACATTGGTCTCCATTCTGATT
TTTGATAAATTTTGTCACCCATTCCCACCTTGGAATGTAAGCAAAGAATCCTGTCTTGGG
GAGAATCCTTCCTCATTGCCCATGGAAATAAAAGGGCTTTAGAACTACTTTCTCTGTACC
AAAATAATTATAGTTGGGGAGAACTAGTTTAGTTGTTTGCTGATCCCAACAAAAATAATT
GTAGTTGGAGACTAACTAGTTTATTTCTTCCCAACTACATTTGGTACAGAGGAAGTAGAT
TAAAAAAAGTCTCTTTACGTTGAAATTTGAATGTTGTTTGCTGATCCACATGAGACCTGA
TGTTCCAGATATTTTTTGCATACCAATGGACGCCGTGTTGGTGATTCACATGCGACCTGA
TGGTCCAAGATATGCATACGACCGTGTGCAAAACGAGCTTTCCACTAGTGCTGGTGTTAC
CGTCAGCGGCGGAGCTATGTGTGCCAAACGAACTGTGAAGATATCTTTTTTTTTGTGTGT
GAAAGAACGATTAGGAAAAGTAGGGTCTTTTGCCCCCCGCGAAAAGGCATGTTTAGGCCT
TCCGTAATGGTAGTATCT