Map Locations of contig_50070 (5589 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_50070

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65349 1 304 bp MLOC_65349.1 Available Available None
MLOC_65350 1 365 bp MLOC_65350.1 Available Available None





CDS Structure of MLOC_65349






CDS Structure of MLOC_65350






Contig Sequence (5589 bp)

>contig_50070 5589 assembly3_WGSMorex_rbca.fasta
GGGAGAGCGAGGGGGAGTGGGGGGGGGGGGGNNNGGGGGATGGGGGGGGGGGGGGTGCAC
GGGAGACGGACGCTGCGTAGTATGTTGACGTGGACGGTCAGGACCTCCTCTGCCTCTTCT
CTGGCTCTTGCCCCATAGTGAAGAGCAGAGTAATAGTGAAGAGCAGAGTAATGGCGTCGC
GCATGGTAGACTGCGGTTCCGGCCATCTGCGTCCATGCCAAATTGCCAACCCACTGTTCC
ATTGGCAACAAGAATTTGAGATGGAAATGTCTTTCTTGTTTTTCGCTTTGCGAATCTGTA
CTTCCTTTCCTAGTCTAGGGGTAAAAATCGATCTGTGTTTACAATGTGCATGGTTTCTGT
CAGAACGCACGCGAACACGGTGGCCCTGGTCATGACGTCGGAGTCGATCGCGCCCAACTG
GTACCCGGGGAACAGGCGCTCCTTCATGCTGGGGAACTGCCTCTTCCGCTCCGGTGGCTG
CGCCTACTTCCTCACCAACTCGCCGCGGCTGCGCCCGCACGCCAAGCTGCGCCTCCGCCA
CGTCGTGCGCACGCACACGGGCGCCTCCGACGAGGCCTACAACTGCGCGCTCCAGATGGA
GGATGACGCCGGCCGGCCCGGCTTCCACCTCGGCAAGGAGCTCCCCCGGGCCGCCGTGCA
CGCCTTCGTCAAGAACCTCCGCGTGCTGGCGCCCCGCGTGCTCCCGCTCCCGGAGCTCCT
CCGCCTCGCCTACGCCACGCTCTCGGCGCGCTTCCTCACGCGCAGCAACAAGAAGAAATC
GTCCTCCGCGCTCACCATCCGGATGAAGGAAGGGGTGGACCACTTCTGCGTGCACACCGG
CGGCGCCGCCGTCATCGACGGCGTCGGCAAGGGGCTCACCCTCACGGAGCACGACATCGA
GCCGGCGCGCATGACGCTGCACCGCTTCGGCAACACCTCGGCCAGCAGCGTATGGTACGT
GCTGTCCTACATGGAGGCCAAGAAACGGCTCAGCAAGGGCGACCGCGTCCTCATGCTCAC
CTTCGGCGCCGGATTCAAGTGCAACAGCTGCGTCTGGACGGTGGAGAGGGCCACCGCCGA
TGCCGGCGTGTGGGCGGACTGCATCCACGAGTACCCGCCCAAGGAGATCAGGAACCCCTT
CATGGAGAAGTACGGCTTCGTCAAGGACATGAGCGCCTTGTGATACAGTCCACCAACTTC
ACGTACATGATCGTCACTTAATTTCTACGTATACACGGTTGATTTTTAAGAAGATGAAAT
AGTACAAGAAGGACATGACGAGGAAAAAAATAGAGTTAAGCTAAGGATTCATTTGCAGGT
ACACATCTATCTATCTATCTATAGCGTACTTATGATTCTTTCTTGTAATGGTGGCCGTGA
CGGAGGAGCGGCGCATTATTGAACACTGCTGTGGGCCGCGGGAGATGTGTTCTTTTGTAC
GTAATTTAAATTTTCGGTGTCAATGTTAGTTTTTTCCTGAAGAATTGGTTGCGTTGTTTT
GTCTCTGTCGATCTATCTGAGTGTACGGTTAATAAATCAATGGAATTCTTTTGTAACGGT
GGTTTTTTATAATGAAGGCCATACCATATACTTCATCCGTTCTTAAATATAAGTCTTTTA
AGCAATTTTACTAGTGGTCTACATACGAAGCAAAATGATTGAATTTACACTCTAATATAT
GTCTATATACATCCGTATGTAGTCCATTAGTAAAACCGCTATAAAGACTTATATTTAGGA
ACGGAGGGAGTATACTGCAAAACCTACCTGTACTCATTCATGATTGGTGGTATATACTGG
TCTTGTATACCTTATCCTTTCTTTCCTTCGTTTTGTTATTGCCAACCGACACAATGACAA
AGGGGCAATGGGCAGGGCGGAGCCAGAATTTTTTGGACACGAGGGGGCGAATAGTCTCAA
CAGCAGAATTTATGTCGGTTGTATCCTTCTTTTCTAAAAACGAAGATATTCTCTGATGTA
TAACTATGAAGGCCGTTGTAAATATAGAATCAACGTGCTTCATCCTGGTTTGTCAGGATG
GAGTTCCCTAATATGTTGCCGTGTCGATCCCTCTGATATTTTTTGCTTCCAATTTTATCT
TGTTATGAAATTTCTAGTGGTGCCATAGTATTTTGATCATCAGTGCATTTTCAATAGTTT
AGCTAGAAGAATGAGCTTAAAATACGAATCTATTTTTGTTATATTATTTCTCTTCATCCT
TCAACCATAGAAACATTAAATGAAGGGAAATTTAGATTTCTAAATTGTAAGCTGACCGCC
TCTAATTTTAGATTAAATCAATGTCTGAAAGGAAATGAACTAATTCACCAACACTAATAC
TTTATATATACTCCCTCGGTCTTAAAAAGCTTGTACTAGATTTATCTAGTCTAACACTAC
ATATTATATCTAGATAAATCTTAGACATGCTTTTTGCGACGGAGGTAATACTATCATACC
CAGGACTGATCACACCTTAGTTCCTTGAGGTTGATCTTTTGATGTATGGTGTAAGGAAGC
GCACAAGCAGTCAGTGGTCTCGTGGATTCAACTGCCGCTGGAGCTGAGTGCCCTCTGCTC
TGTGCCGCTGCCGTGACTGCGGAAGTAGTGATGAGCCGAGAGGCGGCGGAAGCAGTGATC
TAGGAACCATGATTACGTGAAGAAAAATGACTGTTCGATGCCATGATCGCACGGTCACCG
CTACACCTATATTCATTTTACTTGATGCGTACAACTAGGAATTGAGCAATGCAATCTTGT
GTTGGGCCTTTCGGCTGGAAGTGAACAAAGAATCTAATGTTGGGTCGTTAGCGGACAACA
AGTAGCCTAATTACCTATACATAGAAACTTAGTACTAGTACCTACCACCAAAACTCATAG
GGGGCGAGGTTATGGGGGGTGTCTGACCCCTGCTCGCACCCCTGTCTCCGCCCTGATTGT
GGGTTTAGTTCTTTGCTTAGTGTTTAGATAGTGTAATTTTGTAATGGTTTGGGGTAGCGT
GGATATCCTTTTCAGACGAAAAGGACTACATCACGGTGATCAATGTCTCCCATGTTATTT
AGTTGCTGACATGTTGGTTATTGTAATTTGCCGCTTCAATTTTTTTAGACAATCAACGAA
ACTTTATTAAGCCATCACAATGTTTACATGGACGAATGGAAGATCACCAGGTGGCCTAAT
CAAACATAGCGCCCACCCCAGTTTTAACGTATGTTTCGATAGATTGTGAGCCTCGATGTT
CGAGCTCCTAAACCCATGGACAAAACTACAACTAGAAAAGCTAGTAGAGTAGTGTATTAT
TTCATGTATGATTGCACCGTAGTTTGCCCCGCTCTTTGTCTTGATGTCTTTGACCACCAC
CTTGCAGACGGATGCCACATAGATGGATTGTAAGTTCATGTCCTCTGCAAGCGCCATAGA
CTCTCTTACTGCTAGAGCTTTCACTGTAGTCGGGTGTGAGATGCCACTGAAGACAATTGT
CGAAGCTCCCAAAAAAGCTCTGTCCCAGTCCCTACACACCGCGGCAACCGATTCGACGCC
CCTTCTCTCGGCCAGTGTGCATCCACATTGATCTTGACCGTGCCCAAAGGTGGGAGAATC
CCGCCACCAGTCCTTGCGTTGCCAGCATTGGTTGAAGAGATTTGAGGTTTCGTAATGATT
TCAATCTCGTTGCAGCTAGTCTGGACAAACAGATGTGTCGACACGGGGCTTTGAAATATA
TGTTCATAAATCGCCTTTCGCCTCGCGCCTCAAATAGCCCACAATGTGATAACCATAGGC
ACAAAGAGATGATGAGGTAGTAGTTTCATCAATAACAAGATTCAATCCCTTGCATTGTCC
ATATCATGTTGGCACATCTTCTCAACAAGCTCCTCATCTACTAATGCCCACACACTTCTC
GTCATCCAACAGTTTATCAAAGCATGCCTCCATGAGTCCCTCGCTCCACACAACCTACAT
GCCCCGAGGTGGACATGTTTATGTGGTGGAGGAGGTCCGAGGTGGATATAGAGCTTTGCA
CAAGACTCCACAAAAATAGTTTAACCTTGGAAGGGACATCAACACCCCACATGTGTGTCC
ATTCATTGATTTCCTAGCAATTGCGAGATGAACCCCCTCTTTCATCTATCCAATTTTCCC
TTGTAAGTTTTGTGTGCAAGACTATTTTGTATGAAAACTTCATCAAAAAAGTTCCCCGTT
TCTCACAACTGCATGACCAAAAGTCTTCTATGTTTCTTGTGCATAATGGAATTGATAGTA
TCGACGCAACATCAATTGGCAAGAATACCTGGCCTACAAGTTGTTTGTTCCATGTTGCCT
CTGGTGAAATTATCAACTCGGATACGAGGCACGATGGGTTTGGGATTATTCGTGGCAACC
ACTTGTGTCACCAAATGTCCATAGTGTTCCCGCTCCCAAGTCTGCAGATGATGCCTTGCC
TCAACATATCTCGTCTATCAAGAATGGCTCACCAAATTTGTTATGGCCTGCTATCCAGCT
CGGCATCCAGAAACTCTGCTTCAGAGAAATATCCTGCCTTCAGAATACACGAGCTCAGAG
ACGTTGGTTCGCTCAAAACTCTCGAGGCCTGCCTTGCAAGTAGGGCAAGATTGAAAATTT
GCATATCGCAGAAACCAAGTCCGCCAAGATGTTTCGGCAACGTCAATACATCGCATGCCA
CCAAGCTTGGTTTGCACTTACCAGCCTTGCTCCCCCGCCAGAACTACCGGATTATAGATG
TTATATTGTCACAAAGTCCCCTAGGCAGTCTAAAGCATGCCATGGAGTAGACTCACAGCG
CCTGGGCTACGACTTTGATCAAGACCTCTTTGCCTGCGAGTGATAAGAGCTTCTCCATTC
ATCCCTTCACCTTCTCCCATACCCTCTCCTTTAAGTACTTGAACATGCCCATCTTGGATT
GACCCACCTGAGTAGGCATGCCCAAATACCGCTCACTTAATCTTCATGGGGTATGAAACT
AAGGAGTTGCGACAAATATTATCATTGCCCACCACTATGGATTGTGCCATCTATGAGAAA
CACATGGGGCTGGAATTGTGAAGGTGAAATTCATGCCTGATCTTTTGCGGCCACTTAGAA
GGCATTATTCCTGAATATCTGAGACAACTTTATGTATACGAGGTCTATCCATAGGCGGAT
GTTTATGTGTCATTGTATGAAATTGTCATTAGCTTTGCCAGTGCCTGCATAACTTATGCT
TTGTATGAAACATGCGTTCAAATTTAGACGGCCGCTTAACTTTATGTAGCTTCTCACCAT
ATTGTAACCAACCCATGGGTTGTGGAATGCCCAACCATCTAGTACCAATTCCGACATGTT
TGTACTTAAATTGCCCAAACCACTCCCCACTTACGTTTTCAACTTCTCGTTGGCATAAGC
GTCGAATAATAAATGGTTGAAGCACGCCAACCACCCCAGGCGCATCATCATCACGATGTG
TCTTATCGTTGGTACACCCGCCAACTGAAAATACGTTGCTCGAGCACGTGAACCGACGAA
CGATAGTAAAACTAGCTGGTCAAACACGTCAAATGCGATGACATTTGATGTGTTGGAAAT
ATGCCCTAG