| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_50052
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_65333 |
2 |
7376 bp |
MLOC_65333.1 |
Available |
Available |
LOC_Os02g57240.1, FRAME:-3, EVALUE:0.0, 13102.m06586 protein oxidoreductase, aldo/keto reductase family protein, putative, expressed |
| MLOC_65332 |
3 |
2615 bp |
MLOC_65332.2 |
Available |
Available |
LOC_Os02g57250.2, FRAME:+2, EVALUE:2e-107, 13102.m06588 protein OsIAA10 - Auxin-responsive Aux/IAA gene family member, expressed |
CDS Structure of MLOC_65333
CDS Structure of MLOC_65332
Contig Sequence (10259 bp)
>contig_50052 10259 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGTAAGGACGGGCGTTGCACGTGCCCCGTCATGTCCATGCCGACG
CAAACCCGATCCAAATTTAAGTCGAAATAAGGTCACGAACGAACGAAAAACAGACACTTT
TTTGTTTGCGTTGATGTGTTGGGTCATGATTTTTATCCGTTTGATGAGCAAGGTGTATGG
CGTTGATCATCCAACATTTTCTCAGACAGTTTTGTAAAAGGAAAACGGCTCGGCAGCCCC
TCATGTTCCGTCTCTCCCAATCAAATGCATGAATAGCAGCACCCCACATGTTTCCTGTGA
TTCAGTACATGCCAATCAAAGAGGCCCTTAAATCCATTTGTTCCATCATCATAGAGATGG
AACAAGACAAAGCAGCCGGGGCTCCATAGCAGTTCCCCCGGCACCCCATGGCCCACATGT
CAGTAAAGCAGCAGCAGCCAGCCAGCCAGCCAGCCAGCAGCAGCAGGAGGAGAAAGCTAG
TATTAGCTTCCTGCACACCAGTACCATACGGCCACACCCACACGCATACCCACAACTCAC
TCAGCTCAGCTCCAGCCGGAGTCGTTGCTCGCTCGCATAATCATAGCCTCCCCTCCCCTC
CCCTCCCTCCCTTTCCTCCCTCTCGAGGCGCCTCCCCTCCCCTCCCCTCTCACGCCCACA
CACGCGACGCGAGCACGGCCGAGCAACCGGCCGATGCGAGGGCCCACGGCGGCGGCGGCG
TTCGGGCCCGGCGAGCCGCCTCCGGCCGCGGAGGAGGTGGTGGAGGAGAACTCCGGCGGG
GAGGAGGAGCTCGAGCTGGGGCTCTGCCTCGGGTCCAAGAAGCTGCTGCAGCTGCCGGTG
GCGCCGTCGCCGTGCCGTATCCTGACGGCCAGGGACCTGCACCCGGCGGCCGCGCCGTCC
CCGGACTCCTCCGTGTCCTCCTCCTCCCCCGCCGCGGCCAAGCCGGAGGACGGCCCCGCG
CCCGCCGCCTCCCCGGGGACGCTCGCCTCCGGCCACCCACAGAGGTTCCTTCTCGCTCTT
CTCTCTGCCTCTTTGGTAACAAACAAAAGAGTAGAAATTTGTGATTTCTCCCGGCCAAAG
CTCCCACTTTTTTTGCTGCCTCGCCGCGCCCCTCAAATCCCTGGCTTCTATCGCCTCCCT
GCAAACCCCGCCGTACCTGAACCTGCAAGATTTTGACTGCGTGAATGAAATTCTGAAGTA
TGAACTGCACGCCTGTACCGCCTAGTTTTACCCAAAATGGTGCAGACAGAAACGAACCGA
TATTATCCGGTGGTTGTTTTGCCGTTCCGATGCGGCAAAAAAAAAAACACATCTGTCCGA
CCGCCGTTCGAGATTTGTGCACGGTACCGAAAGGAAACATGATGTCAGTCAGCGTTACCC
GATTTGCTGTTGAGCTACCCACACCAGCTGCTTCACCTCGACTAATCAGAACTACATTTT
TTCCCCCTTTGGCAGTAGCTTTGGAGTGGTGGGATGGCCACCAATAAGAACATTCAGGAT
GAACAGCCTGTTCGGCCAGGCCAAAGACAATGCCTCGGAGGCCGAAACCAAGAAGGCCGC
CGCCGATGACTCCGGCTCGCAGAAAGACAAGGAGGAGACCGAGAAGAAGGGCCGGGTGCC
AGGGTGGGTGAAGGTGAACATGGATGGGGAGGTCATTGGGAGGAAGGTGGACCTCAACGC
CCACCGCTCGTACAAGACCCTTGCCTTGGCCCTTGAGATCATGTTCACCAAGCCGTCCGC
CGGCCTTTGCGCTTCTAGTAAGCCTCAATTGTAACTTCTGCCTACCTTGCGCAGTTCGTA
ATTGCACATATAGTAAGATGGTTCGTAGTTGCGTTTATGTTGAGTTGTCAATTCAACGCT
ACCGCATTAGGATTCATGGTGCTACAATTCTCACATCGGTGAAGTGTAGTATCTCTAGGC
CTACTATAGTTAAGAGGATAGCTCCAACTTTAAGTGCAAACGTTATACATTTCCAAGCTT
TTGACGCACTCTTTCTTTATTTGAACCTGAATCATGCTGTTCTTGGAATTGCCAGATGCT
ACGAAGTCCTTGAAGCTGTTAGACAACTCTTCTGAATACCAGATGACATATGAAGACAGG
GATGGTGACTGGATGCTTGTTGGAGACGTCCCTTGGGAGTAAGCCCTCTGCGCTAGGCAT
TCAACTATTAGGAATGGCTTTCGTACTTACAAGTTCCTTGGAATAATTCTCCGGATGTCC
GCGTATGCAGAATGTTTGTTGGCTCCGTGAAGAGGCTAAGGATCATGAGGACATCGGACG
CCAGCGGTCTCGGTTAGATTCTTTCTTACCTCTTTCGTATGACCGATGACACATAGCCGA
GCATCTGAAGCAAGTCTTAATCAAAACAGCGCATCACACCATTTTCCTGTCCGCAAACAC
GCACACACAGATGGTGCTTGACCTATAGGCCTTCAGAAATGATCGCCTTTTCAGCACGCA
AAAGCTTTCGCCGCTGCAATCAGTTAACACGTAGCATTCCATTCCGATTGTACATCCATT
GATGCCCCCTGTTTTTCGCCACCGCAGGGCCACGGTTTCAAGTCAGTCACAGAACCGCAG
CCTTGACACGAGGGAGGACATGAGACGAGGGTGATGAAGAGCCGCCGACCGACCGAAAGA
GCTGTGTACCGTCGCCGGCAAAAGCTTGAAATACGTCGTGCATCCGACACCGACGTTCCA
TGTCCGAGCAGCCAGCCACTGTCTCTGGCGCAGCCGTTGTGATTACTTGTGTGTCTAGTT
GAGATGGCAGGAGCTAGGATGCCCTCTTCCTGCTATCTATCTAGTGGTGGTGACTCGGTT
CAGAGCTTGTAGTATCTATTCTTTTCCCAGGCCCCCTCTCCAGTTCTGTCCACACTTGGT
GAAGTGCTGATCACTGCTAGCATATGTGCTCTTTTTTGGGGGGTCATATATATGTTTTTG
TGTGTGGCACAGGTGTGTTGTTCTGTTGAGTTCAGTTGTGAGATGAGAAGCCCACCTCAG
AAGATAGACAGATAGCTCAGCCTTGCCAATGTGTGCCTGTGAACAAACCGACCAACACAA
CCATACCAAACAGCTACACCTGCTCCGCCCCTGCCGGCCAGGCAGAGAGAACGATAGATA
GCACACGCCCACCGCATGATCCTGAGCTCGTGATAGATGGCATGCTCCGGGCCTGTCTGG
ATCACAGAAAATTCACAGGAAAGCAGCTGATCTGCCGCTCGATTTTTGTAACAGACCCAT
ACATACATACAGCGACAGCAGCAAACATACAAGCAGCATAAAACATGGTGGTGGCGGCAC
CGGCCTGCCTGCCTGCCATCCAAATCTTGCATCTCAGCCATGGAGCGAGAGCCAGGGGCG
CACTGCGGATTCGTGGTCCAGACCACATGCTCGATTCCCACAAACAATGGCAGGATACCA
TCAGCCAACCAAAAGACAGACACAGTGGAGAAACGGTCCAGGCACAACGCTCCAGAGAGG
AATCACGAAAGGATGCCGACGAATGATAACACACACGGGACAGCAGCACACGCAGGAAGC
GTCCGTGACAAATGACAAATGGCGTCGTCCTCATCAGGCCCACTCGACAACAAAATGTTT
CACACGCTGAACACACCGACTACACAGGAGGAGCCATGTATAGTTTCAGAAAACCAGATA
CAGGGAGATAGACCGGCCAGGAAAAAAATCCCACCATGTGGAGGGCACACGCTGCACAGC
TGATAAAACCGAGTGCTTCATCTGTACGACTCGAGGCGCTTGGGCTTGCTCTGGATGACC
GCCTCGATCTTCTCCAGGACCTCCGGAGTCAGCAGCGGGACGACCTCCAGGGCCTTCATG
TTCTCCACGATCTGTTGTTCATCACGCGGTTGCCGTGCAACATGTTAATACTGTTAGACG
CAGAAACAATTAATCTGATCTAGAACAGAGGTGGGTGTAGCGTACCTGGCTTTCTTTGGT
GGCCCCGGTGATCACGGACGACACGTTGGGGTTAGACGCGCACCACGCGATACCCAGCTG
GGCCATCGAGACCCCGAGCTCGGAAGCGATCGGTTTGAGCCCGTTCACTTTCCTAAGCGT
GTCGTCAACCAGAGACCTGTTTGCCAGGTTCTGGAAAGAGAAGCAGAACACTCGTGTGAG
GGTCATTCTGGAATTATGCATCGGTTAGGAAAACTGATTCTGCACGGACGTGTCTGTTAG
GGAGTGGATTCCATAAGCTTACAGGAATCCCAAGGGTGCCATCGTTATTAGTTAAAATAA
TTTTGAAGGAGGGGATACATATATGCTATATGCAGTTAAGAAGAAAAGCAGGAATATGTT
GGTGTCGTACAGTGACGGTTTCCATAGTTACCTTGTAGTTATCTAGGGCAAACCGACTTT
CAGGAGGTATATTGCCTTTGCTATATTTTCCAGTGAGAACTCCTGAAGCTAGAGGACTCC
ATGTAGTTAACCCAATGCCATAAGTACTGTAAAGAGGTACAAACTCAGACTCAACCTGCA
GTAACGCAAAACATTTATTAGTTTATGCGATACGATCACACAAATACCTGCATACATCAA
CAAATTGTGTTGACGACAACGTATCGGTGACAAAAGCAGAGCCGATACTTGCTTAGTTGA
ATGCTAATGATAGTTGAGTACAAACAAGAAACAAAATGCGATTAGGCACAAGTAAACATA
ACAATGATTGCAGTTCCTTATCAGAATGTTTCATATGAGTGATCTGCTAATAGGTTACTA
GGCATCGAATGAATACAATCTGAGCATTTCATAGGCTAGAGTGAAATACAGCGTTCTCAA
ATGTCAGGTGGTAAATTCGTTACTGGTTTGCAATTTAGATTCATTCAAGTACACATTGAT
TCTCATTAGACTCCTTGCATCTTTTTTTCCCAGTGAAAATAGATTTAATGTATTTCGAAA
TACATCGACACAAAGTGATTCTACAAAATACTGCTTAAAGAATCTGCATGCACATGACAA
TAAGCAGCCCTATGAACTTGCCAAATACTCCCTCTGTACCTAAATACTTATAGTTGGAAG
GAGTAATGTTAATTTCATTGGACATGCAAATGAAGGATGGGAAGTGTTACAAATCGGAAG
TACCAATAGTATGAGTTGCCAAAAATATATAACAACACAAATTGTTTATAGTTGCAAAAG
ATATGTAACTAACACAGAATGTTTCTTTTTGGAAGCTAGATGGTAGATGCTAAACTGAAA
GGCTGTTCATCCCCCAAGGATGCAAACAACAATCTGTGTTGTAATTTTAATCATCACCAA
GCCAGTCATGGAAAACGATAAGCGTACTCCACTACCCATCATAGAAAACTCCAGGTCTAC
TTTAACTAAGCTAAGCTTCTACACTCTGTTTAACTGAGATCTGAAACAAGCCTTGCAAGA
ATGTTTACGTGAATTAAAAAAATAGAAGTTTTTAACTAGCTTTGGAGATTTTTATAAAGC
AACTTTGATTACTTAACTGAGCCAGCTTATCGAGTTGGCCACAAAGAAGACATCAATCAG
TTGAATATGCAGATCAGAGTGACAAGGACAAGCGGTGCCTTTTTTTCTGACTGGTCAAGA
CCAATATCAAATTGCCTACTCGACTGAGAGTCTGAGACTAACTATCAAACAATTGTTCCA
ACAACACCCCTATAAGCAACTTCCGTGTGGTCTAAGCTGTCTGAACTTATACCTAACCTT
TTATAATCAGCAACATGATGATGTTTGCCTGGAAAACTTGATGATGCAAAGTATATAAAA
CAATACGAGCAACATCACGGTCTGATTTAGCAGCTACCCTACTCCAAAGCGATGCACGCC
AAATCAAGAAAGATGAGATTTATGCTACCTAACTCCCTTGACTGCTAATCTTCGTATGCT
TTACAGTTGCAACGAACCAGTGGCCTCTTGAGTTAATATATATGTGTGTGTGTGTGAGTG
TGCAATCGATGCTGGAGTAGTAGATTTTTAATGGGGAATGGTACTTGCTGTCTACAGAAT
CCAAAAGGAAATTCCTCTCCTACCATCAATTGTACTACTACTTCATCGGAGTCAATTAAA
TGCTAGAAGACAAATATCCATTCAAATTCACTCCACTGTGAGGCATGGGCTACAGCAGCA
GCAGTTGTACTTCTACAATAAATCAAATTATCAAGCAGCAGTTGTACTTCTACAATAAAT
CAAATTATCACCAACAAATTTGAACGAAGGCACATTTGACGACCTGAAAACATCAGAAAG
GACTGGCACTGGCTAGTCAAAGATCTAGCAAGTACACATGGATCCATATGCCCAACCAAT
CCAATTCGTCTGCCAGTTCACGGCCACCGATTGACTAATTTAAGATCAACCAGGAAGCAG
CTTATTGAGTTAACCAGGAAACAGGCATCAGCCAACCGGAATACACAGAATCATCAGCTA
TAGCGGGCTATCTATACATGAGACCTTTTAATGGCACCCTGATGAAAAGGCTATCGCGGG
GCTATAGCCACCTATTTAAAACTATGACCACAGATCATCTATGACAAGGACATGTGGTGC
CCTTTTTTCTGCTTGTCTGGGACCAATATCAAATTTTCTATTCGACAACAACACAATATC
AAACGATGGTCCCAAGTTCCAACTACAACCCTGTAAGCAACTTCTGTGTACCCTAAGTTG
TCTCAACTTACACCTAACCTTTCGCTATCAGCATTGTGCTGTTGTTGCCTGGAAAACTTA
ATGATGCAGGAGTATACAGAACAATACCAGCCAGCATCACTGCCTAATTTACCAGCCATC
CACTCCAAAGTAATGCCCGTCAAATCATTGGAAGATGAGATTTATGCTGCCTAACTCCCT
TGACTGCTAGTAAGTGCTAACTCATATGTTCTACAGTTGCAAAAGGGAGGCTGTCCCCAT
CACTGAAACAAATAAACTAGCGGCCTCTTGAGTTAAAAAAAATGCACAATTGGGGTTGAG
CCAATTTTCCATGTATTCCTAGGTAATAGTAGATTTTTATTGGGGAATGGTACTTGCTGT
CTACAAAATCAAAGAGGAAATTCCTCTCCAACCATCAATTGTAGTACTCCATCAGAGAGT
CAATTAAATGCATGCTGTAGAAGACAAATATCCATTAGAATACACACTCCAACATGAGGC
ATGGGCTACAGCAGCAACAGCTGTAGTACTAGTTCTACAATAAATCAGATTATCCCCTAC
GAATTTCAACGAAGGCACATTCTGGGACTTGAAAACATCAGAAAGGACTGGCACCGGTGA
GTCAAAGATCCAGCAAGTACACATGGATCCATATACCCAACCAATCCAATTCATCGTTGC
CAGTTAAGTACTACCCACTGATTAATTTAAGATCAGTACGTACAATCAGAACATAATTAA
GTAGATTTGTTAATCTACAGCTGCAACAGTTGTATTACCACATTAAATCAAATTACCCCT
TACGAATTTCAACAAAGGCACATATTGGGAATTGAAAACATCATGAGGATACTTGCTGTC
TACAGAATGCAAGAGAAAATTTTCTCGGTACATTAAACTCCTACAGTAAAGGCAAATATC
CACTCGGAATCCACTCCAATATGAGGCATGATCTACAGCAGAAACAGTTGTACTCCTACA
GTAATCAAATTATTCCCTAGAAATTTCAACCAAGGCACATTTTGGGACTTGAAAACAACA
AAGAGGACTGGCACAGCCGAGTCAAAGATCCAGCAAGTACACATCGATCCACACATCCTC
CCAAGATAGTATCATTGGTAATACAGTACTAGTACTGATTAACTAATCAAACATCAAATC
GAGATTAGCAACACATCCAGCGGACCATTGCTAATACTCCAATACTAGTAGTGCAGTACC
AGTGCCGCTAATGGATGGGCTAATTAGAGACGAACTCGAGATTAGCAGCAGCAGCGTAAT
GCAGAAGAATTAAGCACAGGTACCACTGACGGACTAATTAAACGTCAAATCGAGATTAGC
AACACATCCAGCGCGTCATTGCCGATACCCCAGCAAGCGCTAGTACAGCACCACTCATGT
ATGGATTAATTAAACACCAAATCGAGATTAGCAGCAGCAGCAGCAGCAGCAGAATGCAGA
AGAATTGGCTGAACTAGACGAGGCAGCAGCAGCGGTGGTGGTGGTACCTTGTGGCGGGAG
AAGAGGTTGTACTCGGGCTGCTCGACGATGGGCCCGACGAGGTCAAGCCGGTTGGCGACG
CCCCACGCCTCGGTGATCTGCTGCGCGCTCCACTCGGACGTGCCCCAGTAGAAGGCCCAG
CCCTGATCGATGACCCAGTTCATGGCCCTGACCGTCTCCTCGATGGGCGTGGTGGCGTCG
GGGCGGTGCGCGTACACCACGTCGACGTACTCCATGTCGAGCCGCTTGAGGGAGGCCTTG
AGGCCCTCGACGATGTGCTTGCGGGAGAGGCCCTTGTCGTTGGGCCCCTGGCCGCCCCAG
AAGAGCTTGGTGGAGATGACGACGTCGGCGCGGCGCCAGCCGAGGTCCCGGATCGCCTGG
CCCATGATCTCCTCGGCGCGGCCGTTGGCGTAGACCTCGGCGTTGTCGAAGAAGTTGACC
CCGGCGTCGCGGCAGGCCTGGAGGAGGGACTTGGCCTCCTTGACGTCCAGCTGGTTGCCG
AAGGTCACCCACGCCCCGTAGGACAGCTGGCTCACCCGCAGCCCCGACCGGCCCAGGTTG
TTGTACTGCATCTTCGCTGGCTGCCTCGCCGCCGCCGCTCGCCGCCGGTGGGCGTGGGGG
TGGGTTTAGATCTGTGTGCGGTAGCGCAGGCTGTAAGTGGGCGTTTGGGGAAGAAGGTGG
AGGGGGGATGTGGATGTGGGTATATTTCTCAACTCCGGTTGTGTGTAGGCTGGCGCATGT
GGCGGGCCGGGGGCCGGACAGGTGGACCGGGCTGTCGTGGGGCCCGCGGGGTCAGTGGGT
GAGCGGTCGAAGGCGGCGTGTGGGGACAAGGAGAGCATCCGTTCCAGCGGTTTCGCCGGC
GGGAATGGATCCGGCGTCTGACAGATGGGGGCCACGGGGAGGGACGCACAGAAGAGAAGG
AGAGGAAAAAGGCGAAAGCGAATCCAAATCCCTCGAGTTTTTGGGAATCAGGTGCTCAAT
CTACGGGGTACTGGCCGGAAAAAAAAGCAGCAGCCCACCACGCTCGGCGGGCCTCAGGCT
GACGCGTGGGCCCGGGCGCCTTCCGGCCGGCGAGATCCGGGCGGAAGAAACAGAGAGAGA
CAGACGCCGACGAGTAAACTGAAATGCCTGGCGAGACAGAGACAAAAACGTCCTGGTCCG
AGCGAGCGATCCTTTCCAAAAGGAAAAGGAAAGAGATGTGGGACGCAACGTGGGCGGGCG
GCGCACCCGACGATGCTGCCGTGAGAGCACGGCCAAACGATCCGATCTATATACCACACG
CACATGTGCGTTCTCCTCGTCAGACGAGGATCCGATGTGCTCACCCTTTTCTTTACCAAC
ATGTTGATCCTGTTTGGATCAAAGTTAGTTTGGGTTAGTTTAGACTCAACTAACCCAAAA
ACATTCAAACAAAAAGGTTAGTTTAGGTTAGATATTCGTTTAAAACTGCTACATGCATAC
AATGATGTCAACAAGATTCCTTTTAATTTTGAATTTTAAAAAGTTTTATCTACAAAATTG
TTAATTCAATCGATGATCTGTTTTCATCATTAACTTTCTCTCGACGAGTTCTTCGAAACT
ATATCTCATGTCGACATGTTCCGTCAACTATTTTTTTTCATCCATACTTGCTGCATTTTT
TGACCCCACTTGTCATATTATTAACCACTTACTTGCCTGAAAAAATAACTTAATTCACAC
TTTTAATGTTTTTTCGTAGAAAACCATGTAACAGTTTTCATTATACATGATATAAAAGCA
TTGTCATAGGTTGTGTTTGTCAATTTAAATATGCAAACTTGTCATATTTACATACAACTT
TGTAAAAAAAAACTATTTTATGTGTTTGTTAGTTTAACTATGTCGAGTTATCATATTTAT
AAACGATGATTAAAAAAGATTTTTTCTGGTCATCGATTTTAAATATGTTGAGTTGTCGTA
TTTTTACGCGTAATCGCTTAAAAAAATTTGTTTGTGCTTGCCATTTTTATTATGTTTAGA
TGTCATATTTATACGCAGTTTCCAAAAAATTTGGCGATTAAGTTATTTTTTATCAGACNN
NNNNNNACTTACTAATATGACAAGTAAGTACAGCAAATGTGGTAAGTACGAGCAAAAAA
