Contig Data
morexGenes
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Map Locations of contig_50024 (4139 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_50024

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65304 2 1894 bp AK252303.1 Available Available None
MLOC_65305 1 220 bp MLOC_65305.1 Available Available None





CDS Structure of MLOC_65304






CDS Structure of MLOC_65305






Contig Sequence (4139 bp)

>contig_50024 4139 assembly3_WGSMorex_rbca.fasta
CGGGCAAGGACGCTGCTCAGGCGTGGGTTGCAGCGTTCCCTTGGGCTGGGCCGGTCCCGG
AGCTCATCGACCTCACCTCCCCGACGACGACAACGAAGACGATGCGTAGGACGGCCGAGG
GCGTCCGCGTTTTTTTATTTATGTTTAATTATGTTTTATGTGGACTTGGGCCGGCTTTGA
CCGGCCTTTTAATGTTTAATTATGTTTATCAATTGTTTGCATCCGAACCTGCGTTGGACG
GTCTGGTCTGACTGATCCATTTAAAAAAGCGGACACTGGTGTCCGCTCGGTCGAGCCAAA
CGAAGGAAAAACGGACAAATTCGTGCGTCCGTTTGGGACGCAGCTTGCTGTTCCACGGAG
ATGAAACGCCACGGTGATCAGCGGTACTCCGTTCACCTGTCAATCATGGAGGACAGGATA
GGAGCCGTTGCCCAGGTTTGTCCGTCGTTGTCACGGGCTCTGCCCCGACGAGCGACCACC
ACAGTGTCTACTTACTAGACTAGTCGGCGGGATTTGTGCAGTGTCTTTACCGAAAAGCTC
CGACCACACCACACATGACCCCGTGCGCCAGGGCGAAAGATCCAAACCAAATTCCTAGCC
GCCACGGCAGAAAGTTCCTTGCATTATTTCTTTCCTTTTCATTATTTTTTTCCATCCATG
GGACAAAACAATTACTACTATCAGGTTACAGGTTCACAACAACAACAGCAGCACGGGCCG
CACTACTATTCCACGACGCTTGCCGTCATCTTCTTCTTCTTCCTTCTTCACTCGTCACCA
CAGACGCGCCCCGATTCTTTTGCCACCGGATCAGACCGGGAACCTTAGCCTTGGCCGGTC
CCCAGACACGTTATGATAGTTAACCCGACTGAACAAATAATAATAATTATAATAATAATA
TAATGATAATCGATCGGTTGATTGATTGATTGATTATGGATTCATGGACGACGACGACGA
TGAGGTTTTTGATGCGCCCATGCATGCATGCACGGACTGAGGTGGGGTGGCTAGTGGGTG
ATGGCGGGGTGGCAGAAGGCGCCGTTGAGCCATCCGTCGGTGATCTGCTTGTATGCGGCC
TCGGTGAGGTGGATGCCGTCCCAGCTGAGGTGCGACGCCGGGCTGGCGCATGCGGAGGCG
CCGGACATGCCGCACCTCGCGCTGTTGGCGTAGTTGTACTTGCCTCCCCCCGACCCGCAG
CACGCCTCGAACACCGAGCTGAAACCTGCATTCCACATCCACGCGAGTCAGATCTTGAAT
CGGAATCATATCATACCACACCACACCACAGTGTTCGTTGGTTCATCGTTTTGGTTTCTT
GCTCTGCAATATCCAGCATCCATCATGGATGGATCCCTCGTACGAAGATTCCGAGGGTTT
TGAGACCGATCGGCAACGTGCGGGAGCAGTGGCGTGTGTCCCGGCGGGCGTTCACCACCC
ACCGCCACCGGGGCTGCATGCATGTGTTGGGTTGGGGAAACAGAGCAACGGCTGTTTGCT
TCTGCAAGTAGCGCCGATTTTAAAGGAACAGCGCCTACCAAACCCCGCGCATCCGCCATT
ATTTTCCCCGTGATGGGATGTCGTTACTCGCTCGGGATCACGAGCGCGCCCGTGTCGGCC
CGCGACCTAGTTTTCTATTCACCGGCCGGCGATCGACCGCGTGCAGGCAGGACTGGGCAC
TGGACACGATCACGCTCCCACGGCCGGCGCCGGAGCGCGCAGCCCGGGCTAACGGCAGGA
ATCCGTCCCTACGGCCGTCGCACGCACGGACGCACGGACGGGCATGTGGTGGTGACCACG
CTACCGGCCAGCAGTGCAGAGCAAGTGGTGTGGTGCAGCAGTGCGGCACTGCATGAGCCT
TAAACGCCGAATAATCCTTCATTTAATCCCGCCACCATGCATGCATGTCCCGTGCTGGTG
CTGCCGCACTGCCAGGACAGAGCGTGACGGGCGCGTCCAACAACGAGAAACGCTCTGCGC
CGACAACGGAGGACGTGGTCCACGGCGAGTTTGAAAACTGAAATCCACCCACCCACAGTG
CCGCCACGGCGAGACTAGCCGCCGGCGTGTGCATGAAATCATGTCCTCCAGTACGTATTA
TGACTAGTGTGTAGGCATGTAGACGTACCGTATTTGCTGGGGCTCCGGACCATGTCGTAG
ACGCCGGCGTAGAAGTCGGCGTACATGATGCGGGCCGACTTGTACTTGGCCTGGAGGGTG
GACACCTTGGCCTGGAGCAGGCTGTTGTGGTACGTGGAGAGGTCGTTGAACTTCTTGAGG
CAGCCGAGGGAGTCGTAGTCGGCGGCGCTGGAGGTGCCGTAGATGGTGAGGTAGATGGGG
AAGCAGCCGATGGGGAGCACGCCCGGCACCACCACGTCCGTCGCCCCCATCGCCACCAGC
TTCTCCACGCCGGCGGAGATGGTGTCCACGATCTGCGGCGCGTACGTGCTCGCCTGGTCC
GTGTTGTAGTTGCCGAACAGCATCGCGTTGTAGTCGTTCCCCCCGAACTCCCCGAAGATG
AAGAGCGAGTTGGCCAGGTAGCTCTTGCAGCCTGCATCATCAGATCAGAAAGACTAGTCA
AGAATCAGGCAGGCATGGCTAGGGTCCATGCCTCCATGGACAGTGAGTAAAGTTCTTGAT
TGGCGGCATGGCAGTGGCAGTGGCAGTGGCGGGGGAGACAGCTGGATGGCGCAGGAAATT
ATGCTGCTCGTACTAGAGTATTAAGGGAGGAGCAGAGCATGCCCTGCAGTCTGCAGACAT
GGTGGGCTTTGAAGAAAGGAAAGAAAAGCATGGTGGACTGTGGACTCACTGCTGCCGCAG
ACGGAGGAGGTGATGGTCTGGAACCACTGGAGCTGGAAGCTGATGGGCCCGTTGTTCCAG
ATCTTGTCGGAGAGGCCGAGGGAGCGGAAGAAGGGGGCGTCCATGGCGGTGGCGCCGGTG
ATGGCCATGTTGGCGCCCTTCTTGAAGTCGGCGGAGGTGGACTTGGAGGGGGGCAGGAAG
GGGAGGCCGTACTTGGTGCTGAGGAAGTCGACGATGACGCGGCCGTCGGAGCAGCGGCAG
GTGGGGCTCCCGAAGTAGGTCTCGCCGTAGGGCGGCTGCGTGAAGGTGATCGCCGACGGC
CGCCCGTTGGTGCACAGGTTGCCCGTGTCCGTGATCGAGTCGCCGAAGCTGTACACCGCA
TTGTACTTCTGCGCCGCCGCCTGCAAGGCCAGCCACGACGCACACAGCACCACGAGCAGC
AGCTGCAGCTGCCTCGCCATCGGCGACGACGACCTCGCCATCTTCAGACGCGCAAGCAAG
CAAGCGAGCGAGCAAGGCGGCTACGGGGAGGGGGAGAAGGGGTCGGAAGACGGCGTGCTG
TGCGGGAGGGGAGGAGCAGAGCAGAGGGGTTTGAATGGATGGAAGGGGCGGCGAGGGGCG
GGGCGTTTTATAGGCGCGTGGCAGAGGAGGAGGCTCCGTCGGAGGGAGTCGTCAAAGGCT
GTCCGGCGGGGGGGCGGCGGGGCCATGGTGATGGTGGACGCGCATATACAGGTAGATAGG
CCAGGCGTGTGGAGGAGTGCATGCAATTGAAGAAAGTTGCAAGTGATTGTGATTCGCTTT
ACGTGCCGCCGGTACATGGCATGGCAATGGCGTGGCACTCAACGCTTCTCTTGGACTCGT
GTCGCCGGTCTGGTGTGTGTGATCTAGCTACCGGTGAGGCTCCGACTTAGAAGCATCTTC
AACGGACGTCGGCGTACAAAAAATCAGTTTACAACACGCGCACATCTAATGTTAATACAT
CGGCGAGGGCTGGCTTCAACGGAAGGCGTAAAATTTGACGAGTGCTCGACACTCTAGCAG
ACACGCAAAAACCAACATGCATTTTCATCAAACACAGACAATTCAAACAATAAATAGCAT
AGTTTTAAAATGATGCATAGCATAGATAACCTAAATAGATAGAAATTGATATAAAAAACA
ATACATAACATAGCATAGATAGATAGAAGTCTACTCCTCATCGTCGTCCTCGGACTCCGA
CGCGCCGATGTCCGATTCCTCCGTCGTGATGAAGGCGTCAACCCAGCGTTCATCGTCGGA
GGACCAAGTTGCCGATTCCTTCAGCTCCATCTAAAGGAGTGAGCTTGCTTCCGCGTACG