Contig Data
morexGenes
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Map Locations of contig_49886 (6423 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_49886

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65198 2 1885 bp None Available Available LOC_Os04g32020.1, FRAME:+3, EVALUE:2e-173, 13104.m03061 protein 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed
MLOC_65199 1 923 bp None Available Available None





CDS Structure of MLOC_65198






CDS Structure of MLOC_65199






Contig Sequence (6423 bp)

>contig_49886 6423 assembly3_WGSMorex_rbca.fasta
CACTCTCGCCAGCTCGCTCCTAGCAGTCGTGGCTCGATCAGCAAGACGAGGAGGAAAGGG
ATTCAGAGAAGTTCAGAAACAATGGTGGACACAGAGACTTTTCCGGCGCACATACGCTTT
CTCCTTCCCTCGAGCACGAACTCGACAATGTCCTCCGTTACAACGATCATCCCGTGGGTT
TATATCCCCGAGCCAGCGTACTGGGCACGCACCCACGCCTCTACTCGCCCGCGATCTACT
CCACGTCCTGCATGCTCTCGCCGCGCCTGCTACACACACGTGTGCGCCCGTGTCTCGCGC
TGAGCAGCACCAGACGATCCGATCGCCCCGCACGTCTCGCCAACAAACACACACACACTA
CCCTGGTGCACGGACACGCCCATGCACCCAACACACGCACACACGCACGCCCTGATCCTC
GGACCCGACGCGCCCAGCAAGTCCAGCGCGCGCCCATACCCGCACTGGACGTGCCCGGCT
CGTCGCCGTGGCTTATTCGCCCATCAGAATTGACAATTCTCTTTTCATTTCTAAGGAGAC
CGGTTAGACATAACCAAATTGGGGCAGTATTACTGAAGATGCAATTTGTCATGCTAAAGC
TCCAAATTATTGGCGTTTTTTGCTGATCCGCTGTCATGATTTTTTTAGCTGCCGAGATAT
GCTACAAGGTTTGTACAAGTTGGAATTGAGCAGCATAAGTGGCATGTGTAGCAGACATGT
TGCTCAGGGATGGAATCATGGCTAAATACATGTTGTATAATCTTGGAGGATTATAAGTTC
TGGGATGATCTAAATAAACATCATCAGTACTGATTGGAATAATTGTTAGACCCAAAACAA
CTCAGAGATTTAGTTGGTTTGGAAGATTGATTTTTGTACATGCTTATAATTGTTCCATAA
CTGTTAAGAAAATCTGAAGCGAGAAAAACAAGAGGATATTCTGAACAAATTGTTATATTC
TCTCAACTGCCTAAATTAGTAATTTTAGGTAGGAACTACTTGGGGTGCACTTTACGGAGT
CATAACCTTGTCATCTGAATATAAGCTTGTCACTTAAATAATTATTTAGATATATACTGA
TCTCATATTTTGATGCATTTCCTTTTTTTGATGTCATCTCTTGATGTGTGCTATAATTTG
AACAGTTCCCTGTCAGAATTTGCTGTTCTGGGCTTTGAGTTGGGTTATTCAATGGAGAAC
CCAAACTCACTGGTTTTATGGGAAGCACAGTTTGGTGATTTTTCAAATGGGGCTCAAGTG
ATATTTGATCAGTTCATTAGTAGCGGAGAGGCAAAATGGCTCCGCCAGACCGGGCTTGTC
GTCTGCCTTCCTCATGGATATGACGGTCAAGGGCCTGAACATTCTAGTGCAAGAATGGAG
CGCTTCCTTCAGGTAGCATTTTGCTCAGGTTGCAAAGATGTAGACACATGTATCTCTCCT
GTTTATAGTACCTGTATGATATATGCACATAAAAAGAACATACGAAGAGAGCTCTTACTG
TAAATTAGCTCTTACACAATTTTATCATGACATACACGCACAGTGCTGGAACTGCCATAA
CCACACACTTTGCATTATTTATATAAATATTCCCATATACTGGCAAAATGTATTTTTTCC
CTCCACTTCCTTGCTTATTATGTTTTGCCTGTTCGCATGACCTAAGACGACAAAGCTAAA
TACCTCATAGGCAAACCTCTTTCATGAGAGTGCATGTTAATTGCACAACACTTGTATTGT
GCTTCCTCTACTTCTGAGTTCTGACTAGATAGTTGTAACTACACCAGACTTGATTCTTAA
TTGGACTTCTGTATCATGCAATTTATGGGTTGTACTGTACTTCACAACAGGTGAGAGCCG
AAAGCCATGGAATATTGGTGAACAATTTTGAAGTATTACGTTAAATTTCATATTTTGTTA
ATATAAATACAAACTTGCAGAACCAAAAAATTCTGCAACTATGCTCTTACAGAGATAAGT
TTCTTTCATAGGCCTGGGTGATGGAGATCTTAAATGCTGCTGCCTTTTGGTTTAATTATA
TTCCTTTTTTAAGATTGTCCATGATTGCAGATGAGTGATGATAACCCCTATGTTATACCT
GAGATGGATCCAACAATGAGGAAGCAAATCCAGGAGTGCAACTGGCAGGTCGTGAATGTC
ACAACTCCTGCAAACTATTTCCATGTGCTGCGTCGCCAGGTGAATATAATAATGCAACCT
CCCTCCCCCTTCCCTTCCTCCTAGCCTTGGCAACCATCTTTCGGTGCATTAATCTATATT
TTCCTCTGTTTGCAGATACACCGGGATTTCAGAAAGCCTTTAATTGTCATGTCTCCAAAG
AATCTCCTTCGTCACAAGGACTGCAAATCCAGTCTATCTGAATTCGATGATCTTGCTGGT
CACCCTGGATTTGATAAGCAAGGGACACGCTTCAAGCGTCTAATTAAAGACCGGAATGAC
CATAAGGACCTTGAGGAAGGAATCAGACGTCTAGTTCTTTGTTCTGGAAAGGTATGTTAT
GTTATACTTGCTGGAAGCTGTACGTCAACAAAGTTGCTTCTTCACCTAGTGATTTTACAA
CTAACTTTGCTACGATCTAGGTTTACTATGAATTGGATGAAGAAAGAAAGAAGTCAGATT
GCAATGATGTTGCGATATGTAGAGTTGAGCAGCTCTGTCCATTCCCCTACGACCTCATTC
AGCGCGAGCTGAAGAGATATCCAAGTATGTGGCAGAAAATACCTTTGCTCAAATATTTCC
ATCATGTCGCTATCTTGAGTAGTTTTTCTTTTCTTTTCGTACAAGGCTTGCATGTAGGGA
GAGAAATCTTACAAGCCAATATTATTTGAAATGGGGTATAGAACAAATGAACAATAGGGA
GTGATTGGTCAAGTAGTGCAGGATTTTATTAACTAGGATACTTGTTTCTAGTTTAAGAAG
AAAAAAAGCACTTTTGTTGATCCAGTACACTTGTGGGTATGAGAATACTCATATTGTTTG
CTCTTGTGAATTCTAGTAGTTTCATATTGTTTGCTCTTGTGAATTCTAGTAGTAAATAAC
CACGTAAAAATGATGGCCTAGCAGCACTAAAAGTATATACTGTCTGCGTATTTCTGTTGT
GCAGATGCTGAGATTGTTTGGTGCCAAGAAGAACCGATGAACATGGGGGCGTATGCCTAC
ATCAATCCCCGGCTGCTGACCGCGATGAGGGCGCTCGGTCGTGGCAGCATAGATGATATC
AAGTACGTCGGAAGGGCCCCATCTGCAGCCACAGCTACAGGTTTCTACACTGTCCATGTG
CAGGAGCAAACCGAGCTCGTGAAGAAGGCGCTGCAGCCAGACCCCATCAAGTCCCCGTTC
TGAACGTGTAGGTTCTTTGCATAGCCATGAGAGCTTCTGATCTCCTACCATGCAGAAAAA
CAACAGGTCTAAATTACAGCCATTTGGTGAATAATCGTTACGCATGTGTGGTACCGCGCG
CGTTAGAAACGGTCTGAGGTCCATTTTTTCAGTGCATAATTTTGTTCCCGTCATCGCCTT
TTGTCTACATCCTTTTGTTTTGCTGGGTGCTAAGGTAAAACAAGCTGTCCTACGGGACGG
TACATCCCTTTGCCAATAAAGAACTGTACCCAGTACTGATGTATGTATGTCCTACGTGAC
GGTACATCCATACTGCTGTGCCTTGCATATGATTCCAGTCTGTCTCTCTGAAATACTTGG
AAAGAAACTGTACACAAGGACAGTTCAATGAAGTGGCAGGCACGCTACTCTCTCCCAGGC
CAATTATATACTCCATCCTTCCCATAATTCTTGTCGTTAATTATGGGATGGAGGGAGTAT
GTGGCACATGCTTTCGTCTCGTCGCTAGACATGCATTAAGTAGGCTTCTTGTGTTACTAT
TATGTCTGAACTTGCCGTTTCCTTTCGTTCCATTTCTTTTTTAGATGCAAGATCCATGAC
TGCCCGGTAGATCCATTTCTTTTCTTTTGAAAAGGAAAGTAACCCTCACGAAAAATTGAA
TTGGCATCCAACAACAAGAAACTGGATAGCGGCCGCCTGGGCGTCCCAACGGGCCGAGGG
CCATAGCACTACCAGGCTGTTAGTTCCTCGGACGAACGCGCACTTATACACAAGCAAAAG
GGGACACCGGTCTTAGAAAAAACAAGCAAAAGGATACTCAACTAAAAAAAGAAGAGCAAA
AGGACACCCCTTGCCTCAAAGAAAAAACGAGCAAAAGGACGACGATCCTACGCTTCGGCT
CAACAAAAAGAAAGAAAAAAAGACGTTTGATCTTTAAGAATAGCAAGACAGATAGCAAAT
GCAGTATTCGTGCACTCATTAATGCAGCTTAAGGCAAGGACCAGCTGTACAAATCCAAGC
GTGATTTCTCTGTCAGTACTGTCCGGACAATGATAATCACTTGGTCCTCTTCCCGGCTTT
TGTTTGTGTCCCTTGCATAGAGCACTTATTCATTGAACGGCGCCTCGGTGGCTGCATCTT
CAGATTCAGACACCATCTATCACCCAAACAAGTTTAATACGACTTCTTTCAATTACACAA
GGCCTGCATATAGTGGTTTAAGGCTATTCATAGTAAAAAGTACTCCCTCCGTCTCGGTTT
ATAAGTCATATTACGAAAACCAAATAATCCCAAAACACTAAGGCACGATGCATTAACTTT
TACCTCGTTTCTTGTTTTTTAACTTGAAGAAAGGAACCAACCAATAAAAGACGCGGGGCG
TGTTGTTTTTAATGACTTGAGACTAACTAGCACGATATGCATTGGTCAATTCATTGCATG
CAATGATATTAATTAGCAAGTTAACATTAATTTTTCTTGTTTTTCTCTTCGTCTTGGTTG
CGGTGCACAACCTAAGATGATTTATAAACCGATACGGAGGGAGTATCGTATAATAGTATC
ATGCATATGATATTATAATGTGTGATACTATCTTAATAGTACATAATATCACAAAGTAGT
ATCATGTATGATCATATTTATTGGACACAAAGTAGCATAACATTTAACCTGATACGATAT
CTATCTATGTTACTCTAACTCTCTTTTCTTTAATTCTTTGCCACGTCAGCTTGTTTGCTA
TTTTCAAGTGCATGATACCGGCTAAGATACCCCACTATGGCCAGCCTAATTGTGTGTTTT
GCATGGTGTATTTTTCACACGGTTTGAGGTTTCTACGAGCAAATCTATGCTAGCTAAGGG
CTCCAACATTGATCCTCAAATCGTACACCGTATCCGGAGGCGGCTCGAGCGCCGACCCCT
TTCCCCCGTCTGAGCCCCCCTCCCGCTACTCCCTCTCCCCCTCCCGTCATCGCCAATAGC
TCATGCCGGACAAAGGTCGAGCGGATTTGGCGGCGACGACGTCCTTCCCCATGAAGAGTG
TTCACGAGCCGGGGGAGGAGTCCTCCCTTGTGATATCATCCATGATGCACCTAGAGTGTG
CATGTGCGAGGGAAAAGAAGCCAAGTTAGATCGATAGGGTGACTTGGACGCACTAGAAGA
AGAGTTCGAACTTCTACCAACCAACAACAGGCTTGGCGCTATCAGAGCAGGGAAGTTCGT
GCGAAGACATAAAACTTGGGCGAGCTTGTGCTGCATCTCCCTGAGAAGAAAAAGAATAAA
CTTGCACTCAAATAGGAGGGACCCTTAATCATTGACGACGTACTTACATGAGGGGCGTAT
CATCTCCACAACGCGTGAGATAATCATCTTGAACCAAACCCATGGAACGCGGCTCGTCTT
CGGCGTTTTAACAGCTAAGCTGGTGTAGTCATGCTAATTTATTCCCTTGTTATCTTTTTA
GTTCCTTTTGTATCCTTTTTCCTCTTTCAAGTGGTTTAACATATCCCACTTTCTGTTCGG
ATAAACTGAACCGTGTCCATGAACATGTACTTTCCGTAGACACCTGGACTTTCTAAAGCC
GATAATAGTACATTTGTGCATCTCTTTCATGATGCCTCTATTATTCCTATACTTAAGCCT
CTATATGCAGTAAGTTACACTTAAGATTTTGCAAAGCTGGGTTGCCTTGCTCCTATGTTT
ATCCTCTATGTTCCCGATTGTTCGGCTAGATGATAAAGGGAGAACCTCTGTGATTGTTAT
GACTGGGTAATCCGGATACGTACCTCAGACGGATGAAGCCGAAAGCTAGCGTTCTTAATG
GAAAATTGGCCCGGCACAAGTAAGGCGACAATAATTAGGTGTTATCACCAATGGTTAAAT
TTCCCAAGCATACGCTCAATCTACACACAACGGATACTCTAGAACCCTAAGAAAGGAACT
TATAAAGCAACTATTTTCTTGGGAAGATGTTTCTTACTAAACAAAAGTAATATAACATAA
CTCCATGATAATTGTGTGTCTGTTAGCACCGTATGGCTGGATGAAAGTGCGTTATATCGA
CTA