Contig Data
morexGenes
Links



Map Locations of contig_49866 (6566 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_49866

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65183 2 1053 bp MLOC_65183.1 Available Available LOC_Os03g17100.1, FRAME:-3, EVALUE:2e-50, 13103.m02043 protein Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
MLOC_65184 1 816 bp MLOC_65184.1 Available Available None





CDS Structure of MLOC_65183






CDS Structure of MLOC_65184






Contig Sequence (6566 bp)

>contig_49866 6566 assembly3_WGSMorex_rbca.fasta
CGCATGGACCGGCGCGGCGACGGCGGCGGCTGTTGGACCCGGCGCGACGACGGTGGTAGG
GGCAACGGAAGACATCGTAACCCTAATCTGGTACCATGTTAAACATGTGTTTTGGAAAAC
TGCTCGACACCCTAAACGGGGTGTGGCTATCTCATTATATAGAGGTACCAAAGGGTACGA
TACAAGGTGTATACAAACTCTCTATATATAATCTAACAGTTACTACTGATCATTTTTTTC
AGGGACACTCCAGAAATTAACATGCTTAAAGGACAAATAAACAGAGGATCGTCAAAAGGC
GAAATGAATGTCTGAAGGAACTACCTTTTGTTGAACAAAATAACATTGCACAGTATATTA
ATGTAATAGTAGTATATAAAACAGATCACGGACACTAGAATATACAACAGAAATGCATCA
CACAAGCAGCCAATATTTTTCACAAAAACAACAAGCAAATGTGTGGAAATCATAAAAGTG
CATGTTGTTATGAAGAAAATTAGTCACTCACATCTCATCAGCTAGAGGCCTTTCTAAGTT
CACATAACCCCAGCAACTGCAGGCTACCAAGAATGGGCCCTCTTTCTCTGTATTTGTTTC
AGAGATGTGCAACTGAACTTATTCAGTCATCAAGCAGCATAGTACGTGTTCTAGAATGTA
GTGATCCCAGGTGACATAACCCACTAGAGGAATATGTTTCTTCAGCTAATCATGTATTCC
TACATAAGCTGGAAATTTGATTTGGTGGTACTTGACATACACAAATGCCTGAACCTTGCC
TTGGTGATACTACACACAAATGTCTGAACTACACAACACCAAAATACAGGTTGGGGATAC
TCCTTGGCCTCTTCTCATCTTGCAACTCTGAGTTTTAGGAGTTTTTCGTAACAAGACCAA
GTGAATTTGCCAGATTCGAATGACCCGTGAATACAATACGGAGGATTCATCCCACGACAC
AGATCTAAAACTACATAGCATTGGAAAATCATGAACAGACAGAAAACAGAGAATGAATTT
ACTGTAAATCATGAACAGACTTTTTTTTTCCCAAAAGCAGAACAGAGCATTACTACATCT
ACACGATTACCCAAACAGCAACCACTTATTCAATTAGGAAGCACTAGAAAGTAATCGGCT
ATGCCTTCTTGGGGGACTTGGCGGCCTTCTTGGGCGACTTGGGCTCCTTCTCGGCCGTCT
TCTTGGGGAGCAGCACGGTGTTGATGTTGGGCAGCACGCCGCCATGCGCTATGGTGACGC
CGGCGAGCAGCTTGCCGAGCTCCTCGTCGTTCCGGACTGCAAGCAGCAGGTGGCGCGGGA
TGATGCGGGACTTCTTGTTGTCCTTGGCGGCGTTCCCGGCCAGCTCAAGAAGCTCGGCGG
CGAGGTACTCGAGGACGGAGGCGAGGTAGACGGGGGCGCCCATGCCGACGCGCTGCGCGT
AGCGGCCCTTCTTGAGGAAGCGGGCGATGCGGCTGACAGGGAACTGCAGCCCGGCCTTGA
CGGACCGCGCCACCGCCTTCTTCCTGGGGCCGCCGCCGAGCTTGCGCCCCACCACGTACT
TCTTCGCCTTGGAGACGGCGCCGGCGGTTGATGCGTCCATGGCGGGTAGATTTCAGGATT
GGAGGTGCGGAGAAGGCGGGAGTGTCTTGTGTTTGGACGAGGATCGGGTTTGGGCCACTA
TTTAAACGGCGCGGGAAGGGGGCAGTGTGGGGCCGACGATCCGCGCGCACGGCCATTGGA
CGGTTGGATCGGTGGAGAATGGACGGCTGCGATGCGGACAAAGGGGAGTGACTGGAGAGA
AAAAGGACAGCAGAGATTATTTTTGAGACAACCTTCTGGACCGCGGTCCGTCCGAATGAA
GAACGTGTACATGTTTCCTCAAATAATGTTTTGAAAACTTATTTCTTAAAAAATCGTATG
TTTCGAAAAATTATTTGAATACATGGTCAACATTTCTTAAATAACGTTGTTTCTTTATAA
TAAAGTTGCCACGGCAAGCTTCATCTAGTTTTTTCTTCCAGATTTAAAACTGTCATTGTG
TTTCAACTATTTTTCACGATAATTATTATTAATTGACCTTGGAAAATTTCAATAATTAAC
CACGGCAAATTTAATTCATGGATCATGGAAATTTTAGTAATTCATCATGGAAAATTGAGT
TTATAGATCATGTCAATTTTAGTATTTTGACCATGACAGTTCTAGTATTTTGAATATGAA
AAAAAAATGTATGAACCATAGAAAAATTTATTACATGTGTTATGAAATTTTTTAGTATTT
CAACATGACGAATTTAGTGTATGGTTCATGGAAAATTTAAGACATTGACCTTGCATTTTA
AAGTAATTGACGACATATTTCTTTTTTATTCATGAACGATGTCAAAGTTATTTCACGAAT
CATGTCAAATTTTAGTAATTCACCATGCCAAGTTTAGTTTCTTAATTTCTTTTTTTTTAT
AAAAAGTCAAATTTATTTTAAATGTATAATAACAAGTTTTTGAAATATGTCATGGCATCT
TCAATGTAATCATGATGACAATTTACGTGTAATAGGCATGGCAACTTTTAACCGAACAAA
AAAAGTCGTCGAAACATAACTATATGAGATTTAGTTTGGAAGGTCTCATCGCCACAGACT
TAATCGTGAACACTATTTTTCAATCGGATTTTTTATTTATGAGATAAAATATTTTAAAAA
CTAAAAATACGGAAGAATCTTATTGACATCATCAATTTTTTCACTTGTGCGTGCAGATGG
TGAGAAGCCCAATCTGTGGTCACGAAACGTGTGGCCGGTTGTTACTCCTACAACACGTAT
ATTAGTTTTTGGCGTCCTATTCTTTCTATTTTTTTTACTTTCTTTGTTTCTTCATGGATT
TCTTTGGTTTTTTATCCTTTATTTTTGGTTCATCGGCCTTTCTTGTTTCTTTCTCAGTTT
CACATGTTTTTTTTTCTTCCTTTTCTTTCTATCATGCCTTTGGTGTCTTTATTGGTTTCT
ACTAGATTTTTCCTTTGTTTTCCTTTGGATTTCTTTGTTTTTCTTTTTGGTGGAAGGAAA
AATTTGATGGTCTCTTACCCGCTCGATCGTTGTGTTATTCGTTTGTTTGGTTGGTTGTTT
TCTGTCTTGTTCTTTCTGTTTTTTCCTTTTTTATTTTCCATGTTTTTTGGTTGATTGTTT
ATTTCAAAAAAATCACCGTTTTTTTTCTTTCTCCGTTTCACTCTGGTTTTTTTCCTTCCT
TTTTTTCATGATTTATTTGGTGCCTTTGTTTTTTCTCAGTTTTAATTAGTTTCTTTCAAT
CGTTTCCTTTGATTTATATATTTATTATTATTATTATTCATTTTTTTCTTTCTGAGTTTT
CATTGTTTTTATTCTTTTTTATTACTTTTTATATTTGTTTCCTCTTGTTTTTAACATGTT
TCATTGGTTTTTAGCGCTTCCCTTTGTTCTTTGTTTATTTCCATTGGTTACTTTTTTAAA
CACATGTATAAATTGTTTTCACTACACAATGTACATATTTAGTGTCCATGATGAAAAAAA
ATTAAATACACGACATATATTTTTTCAGAAGGCCTGCTTTGGTAGACCCCCCCCCCCTCC
ACAAACCGTATAAGAGCAGTGGTCATTTCATCAAACCGTATAACATCTATATATGTGATA
CATACAAGGCATCATACCGATTTATTCTTACAAAATTTCAAAAAGTAACATAGGCATGTA
TCAAACTCTAGACCTTCCAGTTTACATAAAACCACACTAACCAACTAGGACATACCATTC
CATGTGCTTATTTCCTTCTTTTCCGGTTTTCTTCCATTCCAAATAGCCGTCGGGCCGGCA
CATTGTTGAAAACCAGCCCTTTTATTACTATTTCTTTTTCATTATTTCTATTATTATTTT
TTCATTTTTTTCATTTTCATTTCCTTCTTCTTTTTCAGGAAATGCTCACACTTATAAAAA
AACATTTTTTAAAGAATGATTGTTTTTTGAAATTTTGTTCATAAAGTACAAATGTCCATT
TTTTCTAAAAGTAAATATATGTCGAAAAAGTGTTCGTTTAAAAAGGAAAAGGCACACATC
AATATAATTAAAATTTTGAACATCTATTAAATAGAAAAATTGTACGTTTAAAGAAAATAT
TCTTTTACATAGAAAAATTTCACATAAAATATGGAACACTTTTAAATTTTCGGAACATAT
ATTAAAAATGAATAAAAATAAAAATATCAATAAGTGACCGGTTTATTGTTCTTTTTTGTT
TCTTTTCCAGTCTTGTTGTTTTTCGTTTTCCCTTTAGTGTTCTTTCTATTTTTCTTCAAA
AAATGCCCACATCAATATAATGGATCCAAAGTTTTCAACACACTAGCATCACGATGCCAA
GCACCCATGATAAATTTCATTGAGTTCCAACATTTTATACATTTTCTATGATTTCCTCGA
TGAAAACCCCTAAAACACTAGCCGAACGTGACGCAACATGGGTTTGGTAAAAATCCCTAA
AAAATTGGTATGTTTGATAAAGCAATTCACTCTATTTAATATATGTATGTGTTAAGACAT
TCTGAGCAATTTTCAAAGACACAACCTATTTTTGACTTATCTATACAATCTTGTAAAATA
CAAATAGTTGTACTTTATGAACAAAAATTAAAAGGCAAACATTTTTGAAATTTTGGGAAA
ACGTAATAAGCGTGAGCATTTTTTGAAAAATAAAAATAGATAAAAAGTAAAAAAGAACGA
ATAGAAAAATCAAAAATACGATAGTGATAAAAGGACCAATTCAACAATGGACTGGCCCAG
CCACGAACTGAAATAGAAGAAAGCAAAACAAAAAGTAAATATTGACAAACACTAGGATGT
TCAATTTGATTATTGTGGTCCTTCTTGTACCAAGAGGTCTTGAGTTCAAATCATGTTGCA
TGCACTTTTTTTTCTTGTTAAAAGAAAGTGAAAAAACATTAAGGGCGTTGGCGTGAGTGA
AATGACAATCCTACCCTTTATTATGGATAGGTATAGAGAGATGTAAGCCGTCAATATGTT
TAGGGGGGGGGTGTTCTACCGAAGCAAATGTGATGTTTTCAAATACATGCTTAGAACACT
GAGAGAAATACTTACCTCTATTGTGCTGCATCATCTCCTTATTTTCGAAGAAAAAAAAAT
AACGCGGTTTACAAATATCATGGTTATTGCTAACACTACCCCAAATCATTAGAAGATGTT
GTATGGTGCCCATTAGTGGTTATCATGAAGTAGCCATGAGCCATCTAGGTGCATTGACTA
TTAAGCTTGGAGGAGCACTTGCGGTTTGAGTACAGTCGAGGAAAGACTAGAGAGGTAGGA
GCGATTAAATTGAGTTGATCATGCCACAAAGTCATTGCGCAAACTAGACTAACTAAGTAA
CACTGATTATCCCGTGACGACGTCGCTGCTCTTTTTTTTCTTTTTTTTTTTTGAGCAGCG
TCGATCCGGCATTTTATTCAATCAAAGACCGTTCATAGTCCAAGAGCACAGCCGCACTTA
AGAACTCGGGGATTACATCATACGTTACATTCAACACGCTAGTAAAAAGACAGTGCTTCG
CTAAAACATGTGTCGTTACATCTGCCTCTCTTTCACAATGTTTCCCTTCAAATCCCTGAA
AAGTTGGGAGATATGATGCCATCTCTCTAAAAACCGGGCCACAGCTTGAACGATCACGTT
TAGCATTCCAATCATCAGCCACATTTTTGCTATCGGTGACCAGCTGAACCCTCGTCCATC
CTTTTTCCATTGCCAGTAGCATGGCATCGCTGTAACCTAAAGCCTCGCATACAAATGAAT
CACTACCATGATATGCTTCAAATCTTCTTGTGAGGTAATTCCCCTCGTGGTCCCTGGCTA
CCACAGCAGCCCCTGCTCTTCATTCGGCAGCACCAACTGCTACATCTGCATTGTGTCGGT
GAGCCCGGCCTGCTTCCCAGGTTCACGGTGCTGGCCGTACCGCTGAGAGCAAAGAATAAA
TGAAGGAGCTGTTTGGCGATCCTCCGGCTCCGTGAAATCCAAGGATCCGGGGAGCATTCT
TTTTCCCAGCTCTGCAATTTTTTAACTGCCACTCCACCAACTCCAAGAGCCGGGTTGGGG
AGCGGAGGGCCTCCGAACATGCCCGAAGACATCCTCTTGCTCTTTCTTGGCCAAAATCAG
GTATACCACTCATCATGGTGCCCTCCATTCCAGCAATATCTGGAAAGTTTCTGCTAAGGC
GTGCTAATGTCCCGTCCATGAGCCACAATTATGCACTAGGGGTAGGAAGATGGGATATCT
GGGTTACAATTTATAGCCTAGGTCCAGCCACACCTTTTCCAGTTCATAAACCAAGAGACA
CCTTTTGTAGTTTCGAGAGCACGTGCACCTATCGAGATAACTAGCAAAAGAGCCCGTGCG
TTGCAACGGAAGAGAAAATAACACATGCTTTGAACGCAATATATTTTCACATGACATCAC
ATTTGTGTTGTCGGCGATGGCCTCAGTGCTCACACAATGAAAACGCGTTTGAATGTACAG
CCACTCGGAATAAGATGAGAAATATG