Contig Data
morexGenes
Links



Map Locations of contig_49849 (5072 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_49849

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65175 1 1520 bp AK363488 Available Available None





CDS Structure of MLOC_65175






Contig Sequence (5072 bp)

>contig_49849 5072 assembly3_WGSMorex_rbca.fasta
TCGTGTGGAGATAACGGTGCGGCCCGCGTGCAGCTGGCGGCTCGGGAGGTCCGCGCGCGG
CCGATTGAAAGTTTTGACCGGTACACCGGCGCAGAGCACTGCCCATTTCTTATGGAAAAG
CATTAAAATCAACCGGCTGATTACAGCGCGGCTTAAGCCTCCTCGAGGCATCGACACGTG
CCCCTCCCGTCCCACCGCTTTTTCCTCCATCTTATCCTTTCTGATCCATTCTCCTCCAGT
CGCGCCATCCTCATCTTCTTCCTCCGTTTTCCCCTCCATGGGGGCTCTCTTCTCATGTGA
TGCGAGGAAGAGGCGACGCCGCCGCGCGCGTGTTGCAGGGGTGCAATAGTGTCCGCCGGT
GTCGCGTTGTGATGGAGCACCGTCGTGCGCGATGGCAGCACCTTATTGAAGCTTCGTCGG
TGGCCATCGAGGTGCTGCCATGAAGCTCGTCGCGTCGACATGGCGCAGTGAAGCTCCGCC
GGTGGCACACGTCGAGGTGCTGCCATGGAGCTCGCTGCGCGGAGTTGCATTGTGTTGTGT
GCTCTGTGCCGGCGGTGAAGTTGCATTGGAGCACTTTTCGGGTTATTGGAGCTCCGTCGC
CGCGCGTCGTTGCAGCTGCAGTGAATCATGTCGGAAGGTCATTCATCGGGGTTGCAATGG
AGCACCGTCGTGCGCGGTGGCAGCACCTTATTGAAGCTTCGTCGGTGGCCATCGAGGTGC
TGCCATGAAGCTCGCCGCGTCGGCGTGGCGCAGTGAAGCAACGCCGGTGGCACACGTCGA
GGTGCTGCCATGAAGCTCGCTGCGCGGAGTTGCATTTGTGCTGTGTGCTCTGTGCCGGCG
GTGAAGTTGCATTGGAGCACTTTTCGGGTTATTGGAGCTCCGTCGCCGCGCATCGTCGCA
GCTGCAGTGAATCATGTCGGAAGGTCGTTCATCAGGGTTGCAATGGAGACGTCGGAGTTG
CAATGAAGCGCGCCGGAGCTCCAGTGAAGCACGCCTGAGGTCGCCGAAACTTCGACGGTG
TCAACGCTACAATGGAGCGCCGCCGGCTCGATCACAGCGCTGCAACCAAGGAGTCGGGTG
TGTGGTGCTGTCATGGAAGCGTACGATCATACGGCTGGGAACATCAGATCGTACGGCTGC
CAACCCGATTTGTAGCAGCGTCCTTTTCTTATTGCTTGTTTTTTAAAGTATATGTTTTAT
CATTTGGTTAAGACTTACTCTCTCTGTTTCTAAATATAAGTCTTTAAAGAGGTTTCATTA
GTGGACTACATACAGATGTATATAGACATGCTTATAGTGTAGATTCATTAATTTTGCTTC
GTATGTAGACTGCTAGTGAAATATCTTAAAAGACTGGAGTAGTTAAGTGGACTGAGGTCT
AGTCACGTCCTTTCTATTTTGTGCAAGGTCCAACAAATTCTGTACGATGGTTTGCAGGTA
ACTCTGGCGCTACAACCTCTGTTCAAGCGCTCGACGACGTACACGGAGCGGGACGACAAC
GACCTGGCGGAGCAGGTGACCAAGTTCGGGTACCAGCACGAGTTCGCCGACATCGCCTGG
TACCCTGGCCACGGCCGCGCCGTGTACCGCATCGACGACAGGCTGCCGATGAACGCCTCC
GGCGACGGCGTCCTCGACTTCATCGGCTTCCGCCCCACCTCGTCCGCGGTGATCCAGGCC
AACCGGCTGGCCGAGGAGCTGTCGGAGCGGGTGGGCAACGGCGGCAGCGGCGGCAAGTGC
CTGACCGCGAGGGTGACCCACGCCGCGCTGTCGGTGGCCGGCTACGGGCTGGCGCGGCGG
AGCGGCGGGCTGTTCACCGGCTACCCGGTGGTGGGGCGGCAGGACCGGATGCAGGCGTCG
GGCGGCTGCCTGACGGCGCCGGAGGACGCGCTCCAGACCGCGTGCGCCTGGGACCCGCGC
GTGCGCGACTCCAGCTTCTTCCACCAGACCACCTTCAGCCTGCCGCTGAGCCGCGCCGGC
GCGTTCGTCCAGGACGTCCAGCGCCTGCGCGACGTGAACCCGAAGGCGCTGTGCGGGCTC
GAGCTCTACGACGGCATCCTCATCCGCTACGTCAAGTCCTCCACGGCGCACCTCGGGAAG
CCGGCGGCGGCGGCGGCCGGGGAGCCGGACGACATGGTGGACTTCGACATGACCTACTAC
CGCAGCCGGGACCCGCGGAGGGCGCGGCTCCACGAGGACTTCCTGGAGGAGATGGAGCAG
ATGGGGCTGTTCAAGTACGGCGGCCTGCCGCACTGGGGCAAGAACCGCAACCTCGCCTTC
GCCGGCGTGGCCAGCAAGTACCCCGGGATGCGCCGGTTCCTGCGCGTCAAGAACGCCTAC
GACCCCGACGGCCTCTTCTCCAGCGGCTGGAGCGACATGATGCTCGGCGTCGGCGGCGCG
CCGACGAGGGACGCGCCAGGGTGCGCGCTGGAAGGGATGTGCGTGTGCTCGCGGGACGCG
CACTGCGCGCCGGAGCAGGGCTACGTGTGCCGGCCCGGCAAGGTGTACAAGGATGCCAGG
GTCTGCACCAAAGTGTAGTCGTCTCGTCTCGTCTCGTCTCGTCCATCTGAATTACAGGAA
GAACGGTAGGATGGGCTTGACACAAACCACACATTGGGTCGAATTCGGAACCTCACCAAC
TGCTAGAATTTATACAATTCCAGTTAGCAGTAACACATACTTCCATCATAGTAATGATCT
AAACAAGCTATTATATTTTTTTAGAGTACACTAGCAAAAGGACCCGTGCGTTGTAACGGG
AGAAAGAAATATCACACGCTCTTAATTTATAAAATAATGGTCTATAATCTAAGAATGTGT
AGTTACGGCACAAACAAAGATGGTCTTATCCTACAAAAATGCAGTTCAAAATTTCATAGG
TCTTTTATTTTAACTCGGCTTGCATGTAGATTTAATACGTACAAAGAATTGAGCAAGTGA
CCTTCAGTTTCATCTCCAATCCTGATTTTATTGACGTGTTCATCCCCAATCCGGATGAGC
ACCGGTATGAAAAAAAAATGAATAATGACTTATTTATTATGATTGCACCCTAGATAGTAT
TAAATGTTTAACAGGTAAAATGACATCATATTTAAATTCTACATATTTTTCTAATCAAGT
TATATATATAATATGTTAAATTTGAAGTTACGGTTTTTAAAAGATATGAGTATTTAAAAA
AATCAATATATACTACGAGTTTAATGTTAAAAAACATCAGGAAGGTTTCTATAAAATAAT
ATGACGGACTAAGAATACTTATATTCTTTATTATTAATAGGTATAGATATAGATAGCAGC
TGTGCGGCCGAATGCTTTGTTGTATTTAATCTGATTTAATCTGGAGACTAGAGTGTACTG
TATCATGTTTTAGTTTGGATTGGACGTTCATCACCGTGTATCCTTCATAAAAATATAATA
CGGAGTACGTCACAGGCATTGCATCTATATATTCAGTTCAGTTTCCGGCCTTCACTACAC
CAACTCGTTTCATTGGTTTTGTCCTGTCAGATGGAAAGTTTCCCTTACATAAAAAGTAGG
CTCGATAGTATCACGGTATCACCCTACTCGAACTTGAATTTGATCGCCGTCCATACTTCA
TAAGCTGCGGCTAGTTCAAGACTCCATTTGCAAGCTAAAGCAAAAATATATAGTACATGC
AGACCAAAAAATTGATCGCCGTCCAATCCAAAAAAAAATTCTCATATAAATATATGTTGA
TTAGCAGATAATATAAAACCACACCGCGAAAGGCCACCAGAAGAACGCATTATAAAAAAG
CACTCCATCTCTCCTACTTGCCAAATCATATACTCTCAGTTTTAAAATATAAGGTGTATT
TCGACATCCATAATACTAAATATATATAATATGAAAATTTATTTCGTTGAACGTCGTGAT
ACCAATTTGGTACTATGGATATCTATATAATTCTCCATAAATTTTATCAAACTTAAATAA
AACTGACTTCCAAAAAAAAAATACACCTTATATTTTTGAAACATAATGAGTAAAATAATA
ATATAAAAATTCAACAACACCAACGATGCAGCAAAGCGCCCCCAACCATTCTAATGATAA
TCAATCCAAAAATAATGGTGCACTTTTTTAATGGTTAAGATCATAATTCACGATAATTCA
AGCTGGAGCCCGGGCTCAGATGTGTCCGATGAATAGTACCCCCACTTAAGATGGAAAAAA
TTCAAAAAATTCCAACTTTCTTTTGTGGTGCAAAATGCTCCTGTGCATAAACTCGGTGCA
AAATTTTGGAAAGTTTGAACATTCGAAGAGCTCCTGGCAAAAAAGACAAAATCAAACGTG
AACAATGTGATTTTCAATAGTTTCTCAGACATCTGAAATTCTCAAACTTCACAAAAAAAA
TTGCACGGAGTTTGCGTAGGAGCATCTTGCAACACAAAAAAATTGGAATTTGAGCCCGGG
CGCCAAAACACCGTTCATTTGAACCCGGGCACCAAAAAATCTTGAACCATTTTTCTATTA
AAAATCATGGTACTGTTTATGCCCGGTCTCTCCTACGAGGATGGGTCATGTCTAGGGTCT
AGAAGGCACAAATGCATCATAACTTACTTATACAAACACGGTCCATCATAGCAGGCACGG
CATCACCGAGCCGGTTGCATCTCGTGCCATCCATCATAGAATCATGTCGTAACCGTTTCA
GGATACCACTTGTCAGATGCAGCTCCAAGCGGTTGCAACTCACGGTCGAGCCGGTTCCAG
CATCTCGCGCCGTCAATCTCTAATACGATGTCACCATTATTTCATCAAAACCCCTCGCCG
GATGCAACCTCCCACCCCGGTCCATTGTTGCTTCTCCTGACATGGTCGGTTGCAACTCGC
CGTGCTCGCACTCGTAGCACCATAGCTCGGCGTTTACCATTGCAGCTCCACACAGCGCCA
CACGCCATCAACTACACAGCAAGGGATGGCGTGTGAAGACGGACAGTTATGTCATCGTCT
CCTTCCCCGGGTGCGACGATACGGCCTGAGCAGCGATCCTCTTCGCCGGCGCCACCATCC
GAGCGTGCAGTGACTATCGGGCGCGTGCACGT