Contig Data
morexGenes
Links



Map Locations of contig_49779 (6191 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_49779

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65118 1 2450 bp None Available Available None
MLOC_65119 26 4458 bp AK373660 Available Available None





CDS Structure of MLOC_65118






CDS Structure of MLOC_65119






Contig Sequence (6191 bp)

>contig_49779 6191 assembly3_WGSMorex_rbca.fasta
AACCATACTTTTATATGAGGTATAGAATTAATGATCAACCCACTTTAACCAAACATAGCC
TAATAGTATGTTCCCTTCATTTTTGCTCTATACACCTCAATGAGAGCATCGTCTTCTACC
CTCACAAAGAACAAGTTAAATGTGTTCTTTTTTGTTTGTTGAGATATGTACTGAACACGA
CTTTTTTAAAGCATATTGATATCAAATCTGCACAAATCATTCACAAATCAAGAATCTTAA
TGAACACCCATAACATTTATTCCTTGCTTAGCCAATAAAATATGTATTACAATTCATACG
CATCTACAAATCATATATACAAGGTAGAATTAATCATAATATATTTTCACAATATTACAG
CAGCTACTGTTCGCCACTATTTAGCTGCTAAGACCATCGCCAATGTTGCCCGAAACACCA
CCTCCAGTCTATTCTCTTTAACATTAATCTGCACGCTGAATCATCTTTTCCTTCATCATT
TAGCGCATAGAATATCTTTCTTGTTTCCAGGCTACATGTTGTTTGTGATAAAAAACAACA
ATTCAGTGAAAATTGTTCTTCACAAAATGAACAGTTTGCTTGCTCCTTGTCTCAACACAC
AAGAATGAAATCAAATAAATCTTGAGTTAAGTAAATGTAGAAATTTCATCTAAAAATAGA
ACATAAAAGCTATGTCAGCCACATGAGAGTTCCATTCTGATTCCTGAAACCTCATTTGAA
ATCCCAACAATTTAAAATACATTGTGCATATTCATTAATTACAATATAATTCAAGTCCAT
TTATGCTATAAAGGAACAAATCAGATCTATCTAAATATCATGAATATAGAATCACAAACT
GCACACACATAAATATATTATTTACAACAATAATTCCAACTGAAAACAATCTTTAATAAT
AAAAATAGCTCCATACATATTTATCATTCAAGTCCAAACATGATCACTTGATCAACACAT
GAACAAATAATCACTTACTTTCAGACTTTTCCATCTGATTCATCACCTGTGAACAAGCAT
ATATTTCCAACATTTGTGACCAAAACTATGGTTATGAAATGAGGAAAAGTAGCAAGAATA
TTTTGCCAGGATGTTTCTGAAGGAGTACAAAGTCCTAATGTATAAGATTGTGCAAAACAA
GCACCCGTGAGGTGGATATATGACTTCTTTACGTTAGCTGATGGATGCAGCTCCAAAAAC
CAAGCATTCCTTATTTTGAACAAAATGTCCCACGCTAACTTTATTATAGGCACACATAAA
GACAAGTGAATGATATGCACACATTCGTTGGACAAATAACTCTCAGTAACAACGCTTTTT
GTCACTGAAGTTTCAGGCTTCCAAATATAAAGCTTGGCATATAATTGGCGTCTGCTAAAA
AATGGCTCAATACACCAATCTAAATAATTATGTGATCGTCGAGTCTAGGTCCTAGATTGT
TTAAAATGGCAGTACTGGTGATGAAACTGGCAACTTGAAGATCGGATGTGATTGATCTTT
CTATATTTTATGGTGAGATGATCATGATTACATAAAACAACATCAAATAAACTTTTGGTC
TGCGTTGAACACCATCACAATATTTTGAGCAAGGATAGCTAGAATGGGTTTTATCTCTGC
TAATATTGGAACAATGACTGCAAATAGAGGTGGAGGTGGATTTGCATTTACCAAAAATAA
TGTCGGTTTCGAGCTTCTGCCCCTCAAATAGTTCATCAATCTAAATTATCCTGTCTACAG
CTAGCTCTGAATATCCAGTCGATTGCATCTTAGGCGAGTAGTTTACACCAACCTGAATAT
CATGGAAGAGGCGTTGACCGCTACATCTCAAGATGCCTTCCGTTGCAGCATGTTCTCTCC
TGCATTCATCCTCCGCCCTTCTCATATTTGGCCTTCTTACTGTACTCACAACGCCTATCT
TCTCCTTCTCTCCCTACCAGTAACAACACCGTAAGGATTTTAATAAAAAAAAATTGATTC
AACATAAAAACGTATTTTTGTTAATTCATCATAGCTACAATATCCTTACTACTTCAATCA
ATCACTGAAATAATATCACAAACATCACAAATTTGAAATAAAAGTTGGAAGGCGGGATAA
TGGGAATACCAGCAGTGTGACAGGCTGACAGCGAAATAACTGGAAGTTACACACCAAGGA
TAATCCAAACCGACCTTGTACATATTGTTGTGTTCATCTCTGAATCCATACACCGTGTAG
TTTCCTAACAAGAAAGAACAAACACACTAAAGCCAATCTACTAAAGGCACATAAATAAGT
ATTGAGTCGGCTACTTATATTCAAGCAATTCGTGTGGGAATTTCAATGAACCTCCAGACG
TGCAATTAACACTTAATAATTGTCTTAGTTAAAAATGGACTTCCCACAAAGCTGTAAAGT
GTAAAAAATCCAAAGTCCATGCATGACACTCAAAGGTTTGGGCGTCACACTGACCGATGG
GATCTAGAATTTACAGAGAATAAGAAGTTTGCAAAATAATGTTTAATGGAAATCAACATC
CATGGAAGAGCAGTCAAAGTATGAATTTTTTTTACTATTTGAAATCAACACACAAGGTTT
AGAAGGAGGGAAATTCAAACAAATTATAAATGGTTCATCAGGTTTAGAAAGATCAAGCAA
AAGTAATGAGTTATGTGAACTCCATTTGTCAAAGAGAGATATTCTAGTCCATCAGTCTCC
TACACGTTTTTACCTGGAGATTTAATTACAAACCATAGCTTGCGAAATTTTACATTGTGC
ACAAATACTTCAAAGGAGGCAATGTAAAGTCAGCAGCTTCACTTATACTCCCTTCATTCC
TAAATATAAGTCTTTCTAGAGTTTCACTAAAGGACTACATACGGATGTATATAAACATAT
TTGTGTAGATTCACTCATTTTGCTCCGTATGTGGTCACCTAGTGAAATCTCTTAAAAGAN
NNATATTTAGGAACGGAGGGAGTGGTTGACATGTTGTCTCTAGAACCAAAATAGGAAAAA
AATAGCTAAAGGCACTATGCAACAAAATCTGCATGCAAAGGCGATGAACAATAGAATGTG
TGTGTGTTGTTTCCAGGAATGAAACAAAGGAAAATGACGAGAGGTAGATCAGCTCTATGG
AGCCGAACACGACGTAGAAGAGCATGATGAAGATGACATGCTTCTTCTATATCAGCAGCA
TGATGACGGTCATGAGGTGGGTGGTGATCGCAAACGTGGCCACCACACAAATCCCTTTGC
AAAACCAACACCGGGTCGATCAGCTCGATGAATAAATATGTTCAGCATGACAACATCTCA
CTCAAAAGTGAAAACCTTAGTGAAACACAAAGGCCTTATCCTTGGCCAGCTCCTTACCGT
AAGCATGGCTGATGCTGGTGGTCGTCCGGAAGGCGACCGTGACGACGATGCTCGCAAATC
CCATGAGGAGGTTCACTTCAGGAATGTAACCTGCCCCTCGTACTTGTGCGAGGTGTGGAT
CACTCGAACCCTTGGCATGCAACCAAGAGACAGGGCCTTGGAGAGGATGGCAAACACACC
GGAGAGCATAGCTTGGCTTGCTATGATGGCAGCAAGAATGGCAAGGATGATGGTTGGCCA
GAACATTGGTGCTGCACAAGGAAGCAATTCAGTTACTTGTGCCATATTTACCAAATGCAT
GCATCTACTCCGTGAAGCAGCAAAAGTGCAGTCTTATAAAAAAACATGTACCTTGGATGG
ATCTGTAGAAGGTGTTTGGAACGTTGTCTTGGAATTTCCTCAGGTAAGGCGCCTGCCCAA
TATAACACAGTGCCACTGACGGGACATGATGTCGTTGAAGCTGAGCTGCAAATGTAAGCA
CAAAAACCATTGTAAGATGAGATCCTTCTGTTCTGAACTCTTGAGGGAGGCCTCAGGAAA
AAAATGTTACTTCTGAAAGCTTATATCTAAAGTTAATGTGGTTACCTGAAAAACCCTGAT
GTTGAAATGTCCTAGGTTAGCAAACATACCTTCTATGCCTGTTACATACTCCCTCCGTCC
CAAAATAAGTGTCTCAACTTTATACTAGGTCTAGTATAAATTTGTACTAAGCTTGAGANN
NNTATTTTGGGACGGAGGGAGTATGACAATCAGCCAGTTAATTCAGATTGCAGTTCTGCA
GGCTATAGTTTGCAACGCAACTGCTTGTCAGTTCAAATTTTTCAGTTAGAAATTAAGGTT
ACCTGTGACACACAAGATAATCCCACTAAGTGACACCCATCCACTCTTCCCGTTCCTTAT
GAAGTATTGCACTATATACATCGGATTGAAGGCCCGCAGAACACCGATGTCTTGAACAAC
GAGGTTGTACATCCCGATGCCGGCAATTAGAAGGAACCACATTGAGATGACTGGCGCAAA
GGTGTATCCGACCTTGTCGGTCCCAAAGCGCTGGAATGAGAAGAGCATGAACAGAATCGC
CACCGAGATGAGGACCACTTGTGCTGCACAAAGAACAAAATAGGAAAAAATAGCTAAAGG
CACTATGCAACAAAATCTGCACGCAAAGGCGATGAACAATAGAATGTGTGTGTGTGTGTG
TGTTGTTTCCACGAATGAAACAAAGGAAAGAACCTAATACTTCAACCCAGCTTATCATTT
AATAGCATGTATCGTCATTCACACCTTAATCCTAATACTAAATACTCAGAACATGATATG
ATGCAGTTCCCAATTAAATAAAAAGAAGAGAGAGTCTCAACTCCCTAAACCATTAATAAA
TGATTTATGTAATGGAAGATATGGACTTCTTGTCATGTGGAAGGCCTCGAGGTTGGCTGT
AAAAGGAATACAAATCAACATTATTCCTAGCAAAACATGGTTGAACAGATCTAAACTCTA
CAAACAAAGGAATAGATAGAAAAACACACTAAAGTTCTAACCATTAACATACATGTGGGT
TTTCTATCAAACTTAGAATACCTAGTGCTTAGGCTAACGATGTAAGCCGCGTGCACAACA
TCCCAAGCTTCTGCATGAATCGTGAAACAAAGCAAAAATGTAACTTCAATATCTAAAGTG
CAAAAATATATATTATTTGGAGGTACCTAGATGTTAGCTACTAATCCCTCCCAATCTGCG
GAGATTCTTTCCATACAAGAAATTATTCTGTCGATTTATATAAGAATGTATTTGATAGAT
AGGTGGCATATTCTGTTTAAGCTTCAAATTCGGGAGTGATTAAGATAAAGGTGAAAGTAT
TAAGCTAAAGTTTGTATAGTAGATGAACAACCGGCCAAATCGAACATCCATAACATCCGC
TGCCCAAATAGAATGTTCCAACCAATCGATGCAAAATTATTCCCACAAATAGCATGATGA
ACAGTTAAACACATTAGTTGGCAAAAAAAAAAGATAACCATATGCCAACTGTATTTGAGC
GACTTATGATATGATTCAGGTTAACTGCTAGCTACTCTTTTGATAAAAACAGAGTACATC
TGAGAAATCAACTCCACATGTTCCTTGTCAGCACTCTTATGTGATATCAACGTCACCTTT
GAAAGGAAATTGACATGTTCCTTGTCATCCATCAAACACTGGAATCAGAAAAAATATACA
ACAACAGTTAGTAAATCATAGGATTCCTTGTGGGTAACAGGAAGGCACGACAACGGCCAA
TTTCCAGGGCATTCAGCAAGTGCATGACGAATTTCACCGGTTGGTGTGCTCGGGAGCAAA
ACCAGCACGCGGCCCAAAGCAAAACCATGACGCTTCCTCGGGCCCATGCACAGCCTTGGC
CAGAGGTCACTGCTGCTGCGCTCCCCGCGAGGGGCTAGGGGCAGGGGTGCGCTCCGCCAC
GACAACGACCAACCTGAGGCGACCAGCGTGAGGGCGGCAACCACCGGAAGGGACAGGATC
CGCGAGTTGCTCAATGGTGAGGAGGCACGTGATAAACATAAAATTGTCTAGAATCATCAA
ATTGTCTTGGGTATGTGTATAATACCTCACCCATTCATCACAAATTTGAATCATCTGCAG
GTCATCGGCGTCCGTTGGGCAGCAAAGGAGGACACCGCCACCGCCCCTTGAGGTACGGCG
GGGGCTGCTCCATAGTGAAGGAGAAGAGGACTGGTGGGGGAGTGGACCGACGGGCGGCGG
AGTCCGAGGCCGCTGATCGGCGGGCGGTGGAGGTGGAGGCTGCGGCCGAGTGGACCGGCG
GGGCGGCAGAG