Map Locations of contig_49759 (9296 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_49759

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65108 1 1018 bp MLOC_65108.1 Available Available None
MLOC_65109 9 4253 bp MLOC_65109.6 Available Available LOC_Os09g34300.1, FRAME:-2, EVALUE:0.0, 13109.m03446 protein Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed





CDS Structure of MLOC_65108






CDS Structure of MLOC_65109






Contig Sequence (9296 bp)

>contig_49759 9296 assembly3_WGSMorex_rbca.fasta
GGGACAAGTTGCGTCTTCGTGTTGCTGCCACTAAGGATAAAANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTGTCTACATCATGTCATCGTTCTACAAGCATTACTTCGTTTGTC
AAGAACTTAACACGTAGAGAGGCCAGCATGGAAGTGCTCTTGAAGTGAAGTAATAGTAGT
AGGTGCACCCAGAAGGTAACCTATTTGCTTATGGACGTGATGCCTATATACACATGATTA
TTGACGTGAAAATCGCATAACTATACGATGTTCTATCAATTGCCCAACACTAATTTGTTT
ACCCATCATATGTTATTTTCATGAGAGATACCACTAGAGAACACTAGGTCCCCGGGTCTA
TTCACTTATATATTCAGAAAAATTGTATTTTCCTCGCTGCCTTCTTTTATCTTTTATTCT
AGCTATTATTCTCAACAACTATCTACACAACTCACTTGCTTGCAAATAAGAAGAACAAGG
GGATTGACAACCCTCTTGCTCGCGTTGGATGCAAGTTGTTTGCTCTTCTGTATTTAGCCG
TTGAACACGGTTGATGATTGATATTCCTATTGGTTCGATAAACCTAGAAGAGCCAAGCGG
CTGATACAACGCCTTTCGGCACACGGTACATACTCCACGACTACAACATACACAAAACAG
CTCCCTAGTCAAACCTCAAGCCATAAATGGTGGAAAGACAAGACTCACAGGTCAAGGACC
ACGTCTCGACCAACACCGGAAATCTAGAAGCATAACACCAACTACATCTCAGGCTGGATC
AACGCACTCTTCACCCTTCGCGCCTAGGATCGACAAGTGAACAGAGGGAACCAGCTGGGT
CCGAAGAAGACAATGTCCGAGGAAAATCGGCGGCGTACATTGTGCCTTGAGAACCCATGC
CTACAGCAGCTACCATCACCAACACACATTGCTCCAAACCTCGCCGAAGCATCGACAAGG
CCACCACCTCCAGCGACAACTCCGGTGGCCTTCATGGCACCCTAACAGCACCTCCAAGGA
GGACGTGACGCCGTTGCGCCGCTGCTGCCTGGCCAGCAAGCCAGCCAAGGGTTTCCCCTA
GTGTCCAAGCAGGGCACGGGCATGGCCAAGACGATTCCTCCATGGAGGAGACGACACCCG
CATGTGTCGTCACCGTCTACACCGGCTGCTGTGGTGCAGGGATTTCTCCTCAATCCAGTC
TGAACCCCATGGTGACCGCCGAAAAAGCGCCATCCGGAGCGGGAGAAGAAAGTCGCCGGC
TTGGCATCAGCTATGAGGAGGAGAGCTGCCTCCTGGTGCCGGCAAAGAGGGAGACGCCGG
TGGTCGTGGCCTAGACCATCAGCACCAGCCATGCCCCTCCGCCGCCAGGCCCAGACACGA
GTAGCTGCGAGGCCACCGCGTCGCCGCCCTCTCACCGCGCCGCCGCCCGCAACCTACGCC
CCTACCGCGCCAGATCTGGAGTCCACCACCCAGGATTCGTCGGCCACCATCCATGGAGGA
CAAATTTGAAATGATCAAAATCTAGTAATTCGTTTCGGTTCCTGATATTTCTTTGGGAAA
AAAGAGCTAGATGTACATGTCAAATACTTTTTTAAAGTATGAGCAATTAAAATAAATATA
TTTTATACTAAACTTCTATATTTGTGTATAACTTATATGATTGCTATATTTTAACTTATA
ACTTGTTTAACTAACATAGTTAGGAATACTAACACTGATAATATTATAATTATATATTTG
TTATACACTTATTATCGTATCATTGTAATATACATATGTGTTGTGCTAAAACTTATCTGT
ATTTTGTAGTAAAACTTTCTTGAATTATTTTTGTCAAAATGTATAAATAAACTTTGCAAT
GTGAATTGTATGTGTATGTATTTTACCATTCTTAAATATACAATGCTAGAGATCTCTAAA
GCATACCACAAAACAAATATCTCCATAATACTTTCCGGTCTATGATGAGGTAATCAATTT
TATAGAACCTCTAGCTTATAAGATGAACTGCTGGAATTAAACATTCATCAATATATCTTG
GTCAAATGTTTTTTGCAAGTTACGGTGATATCAGTAATCAATGGGTTATGCCAAATGCAA
TGTAGAAGAAGTAACCTTCACAAAAAAAATGTATTTCCTTCGATACATCCATTTGAGCGA
CACCTAATATGAATCGGAGGAATTAGAAGAAGTAACATGCTGGCATTTTTTAGGGTTCGT
AACAGGCTGGCTAGGTGGAGACAAACCAGCTATATGGAGCTGCCGGCCCAAGTTATAGAG
GGACATATTTTTTCTTGTACCGGGTGCAAGTTATAGACTGGTGCTGGAATAATTGCCGCA
GAATTTTTTTTCTCTGTGCACCAGGAACGGCTGTGGTAGCCTCACCACTGCTTTTGATTA
GTCTATTCCATGTGATGAGTAGGTTTGGCACTTGTATGTGTGATGAGTTGTTTCCAGGAA
ATAGAAATTTCATCAAAATTCAGTTCTTTTATCGAATATCCGAACGATTTCGCTGCTTGA
GAGCGACTTGTCTTACAAGATAGCTCTGCTCCTCAGCGTGTAGACTGTTCATTCAACCAC
GTGGTGAAAATCTCTATTGCAAAATATGAAGAAACTTTCAATCAAATGTACTCCCTCCAT
TGCATATTAAGTGTCGCTGATTTAATATAAAGCTGTGCTAAATTAGCGACACTTCGTTAT
GAAACGGAGGTTGTAATTTTGAACAAATTTAGGCAACTGTAAGTTCTTCTCTGAACCGAA
TGTTGCCATCTCCTTCCTGGAAAAAATGCAGGCCAGGGTGCGGAATGCCGGCCGGGGAAG
CTACCCAACCAGCTTTTTTCCATGGCTTCCAGTCTTTTGTTGCCTCTGCTGTTCCTTCTC
CCCACCTGCTCTCCTCCTTCCCTTCGCCGCAGCTCCGTCAGCGACATGGACATTGTTCCC
TGTAGCCGGCTCAAGGCCACCTTTGCTTCTTCCTCTTGACGTCGTTGGAACCGAAGGAGG
GTCCTTGCCGATGCCAGTTGCTGCAACCGGTTGGCGTGGCACTCTTCTTGTGTCGCCGCC
ATTTCCGGCATCGGCCTTCAGATCCTTTACACCAACCGAGACTCTTCTTGTGGTGCCACC
ATTGCCAGTATCGACCTTCAGATCCTTTGCACCAACCGACACTCTTCTTGTGGTGCCACC
ATTGCCAGCATCGACCTTTGGATTCTTTGCACCAACCGACACTCTTCTTGTGGCGCCACC
ATTGCCAGCATCAACCTTCGGATCCTTTGCACCAACCGAAGGATCCTTGGTCCGGGATCT
TGGGGCAGCCACCTTGACGTTCTTCATCGCAGGTTTGTCAGCGATGTTCTTGTCTGCCTT
TGTGCTGCCTGGGGCTATGGTCTTCTTGTCTGACGAGGTTTTCTTATCAGCCTTGGTGTC
TGTTGTAGGAGCTGCCACTGCATTGTGCAGCCTGTTTCCCAGAGGTGTGTAGCTTGATCT
CTTGTCTATTTTGTAAGATGGGGACTCTTGTTTGCAGAAAGCAGGGGATCCTCTCGTGCT
GAGATTTTTCTCTGATGAAGAGCTGGGTCTCGCTGTTGGAGTGGCCGACTTTGAGGAGCT
GGACGTCGTAGGAGATTCAGACTTCGAAGATGTGCTACTGGGTGCATCGAACTTTCCTGA
GAACTGTCAAAGTTTCACAATGTCAAGAAGATCAATGGGAAAAAAATGAATAAATCACAA
AAAAAGAGAAAAAAAAAGGTAGTCTTCTTTGGTTTGGTGGATAACTTTCACGATCACCTC
ATGGTAATAGAATATGATTTTTTTGCATAAAATTTTCTGCAATTCTGATGCGGTATTTTA
ACCTGGTGAATGGTGAATTACTTTGATATGTGTCATGTTTTTTTTTTTACAACATGGTGA
GGTGTATGTCTTTTCTAAGGTATGTACAGTGAAAGTGTTGCTTTTATTGTGAAGAGCTAA
GAGTCATCATACCCTTGAAGTTTTAACTGGTTGAAGGATAGGCAGCTCCCTCTGGAAAAC
CATTTGGGTGGAATCAGCTTCCATCTCAAGGGAAGCGAACAGAGGGGTGGCCGGAGGAGT
CTTGAGCCTGAAATCAAATGAACAGCCCCGTTTCGAAATACACAGTAGAGAGAACAGTCA
ACATGTTTTTACTGCAAGCAAATTTCAACTTTACCAATCGTAATCGTGCTTTTCGCCATC
TGTGAGTAGGTAATCTCGCTTCCCCGAGGCGAGTTTGAACATGCGGCGGTCACCTATATT
CAGACAACCAATGCGTTCTAGTCAGATCATCCATCTTCCAAGCAAAGATGTGTATCAATC
TCTCTAGATCTGATCAACAGTTTACTGAAACCAGTGACTCAAAATCTCGTCTTAGCTCCG
GACAGCGATAGCAGGGGAATAAATAGTCGCATCCCGGTGACAAAACGAACAGGCGAAGAA
GTGAAAATAGAAGAGATAACACCTTACCTTGGATGGCTTCAAACTCCACAGAGTACATTG
GGTCAAGGAGATTCACCTCCTTGTCCTGATCATGCCTGTACAGCTCCCCAAAGAGAACCA
GGCTCTCGTCTTCGTCCTTCCGGGCCGGAGCCGCCGCAGGTGTGCCCCTCGCCATGCCGG
CAAACCTCCTCGTGCGATCCATTCTTCAGGTGCTCAGCGCAGGGAGCAGAATAAACAGCC
AAACTGAAAGTGCCGAGACACAGGGAGAGCAGGTACAGGACATACATATATTGCATACAG
TGACGAAAGCTTACCTGAATAATAAAAGGCCAAAACTGTGCCGGCAATCCTGAAAGTTTC
CCTGGAGCTCCACGCGATCTGCACAAATGCAACAAATATGCTGATGAAAGGGACATCAAG
GTGCAGCCGAATGGAAAGTGTTATTATAATGGGGAGTACCGTTCCTTTCTCCTTGGCCTC
CACATGGCACCAATTTGTTCAGTTTTGGCCCCTTCAGAAAGGCCAACTGTAATCGGTTTC
AGTGCACCTCCATATAAAAACCATGCCCAGAGTCGGCGGAGGCCGGGGATAAATCCGTCG
TGAGGCGACGAAGAAAACAGGCTTTCACATGATATAATTCACATACAAATAACAGAGTAG
ATACAGAGAGAAGCAGGTTGCTGGTCTATGCAGAGCAGAAACAAGCATATCACATCACTC
ACATTGCAGTACAGTGTCTACAGGGCCACTCACATTCACATTTAAATCATACAACACACA
GCCAAAAAGAGGAGGTCAGCATGGTTATAAATTTGTACGGCAACCAGTTTTAACTCGAGG
GTTGAGTGTTGTCGTTCTGGATTATTAGTGTTAGTACACATCTCTGCCTGCAAAGTTCCG
AAGTACTCTAGGATTCTAGGCGACGAGCAGCCGCTTATGTTTGTGAATTCGACACACAGG
AGTGGTGATCTCCAGCGAATAGTGTGGATGTTGTCGCCGTTATTGTATATGGTTTGTGTG
GAGTGTCCATTGACTAAGTTTGCACCTTCCCTTTCTTCGACTCGTATGCCTGCCTGATTG
CATCCCAGAATGCAGGCATCGCCTCGGAGTCGGGAACTTCTTTGAATGACGGAAGATAGT
TTAGGTCCACTATGACATGGTCTCCACTACCCTCTTGAACCTGCATATTCAAAATGCTAG
GTTTTACAGCTGAAGTAGAATGTGCAACATGAAAAGATAATGGTGACTGGAAGTGTTGAA
GACTTACAGTGGGAAAAGGTTACTCTCTTTGTAGCTGCACTGAATTCTAAAAGCATAATC
CATACATGAAGAAATACTTACAACAACATCAAATCCAAAAATTGTTAGTCCAAGTGATTC
CTTTAACCGTTTTGCAGCCTCTTCCACTACATCAATGTTCAGAGATTTGTTATCTTGTAC
ACTGTTCTGCAGTAGCTGCTCCTTAGTAGCCACTGGAAGGGTCTTCAAACTGTGAAGCCA
AATTCAAGTGTGAATTTAACAGAGGAATGCAGAATGCATCCAATACAGTGCCAATATATG
TATTTTCCAAACTTTACCTATTAAATGTAAGAGGTTCATCTCCTGATGACGACTTCAGCA
AATTTGCATTGGGCATTGAGTTTTTTACAGCATGAAAAACCTTGTCTCCAATTACATAAA
ACTTGAATATCTTGGACCCGTGATCAATGTATTCCTGCATCACATAAATAAAATCTACAC
ATTCAGCAGCTGAATCACCACAAACAAAGGTTCATAGGTACAGAGCTGCAGGGTGCATCA
AGACATGAAGGTCAACATAGAATGCCTCAAATAGTGTCAAAATTGCAGGTGAACATACAA
GATGTGATACTCTTAATCGTGAGAACATATAACACATTAAGAGTATATCAAAGATGCCTA
TTTCCTACCAAGACATTGTCATAGGGGAAAATGCAGAAAAGTGTACCTGTAGAATAGCTG
GAAGAGGCACACTAAGGTTGCTAAACTCTTCGATTTGGAAAACTAATGCCTGCAAAAACA
ATTTCCCATTTAGATGCAAAACTCAAAAGGAAGCAAATGAAACTCCAAACTAAAAAGGGA
TTGAGTAGCACAATGAGCCAGTCTAACCCTTTCTGTACGAATGGTGACGAAATGATATGA
TTGGAAATTAATGCAATACACTAACATTCTGATGTAGAACTAAATACAAAGACAACAAGC
TACCATATTGTGCGCATCAGCAACTCCACATGCTACTTGTGGCTTCACGATGAGTGGAAA
TGATAAATTAGCTTCTGCTAGTTGCTTCTGTAATTCGCTGCCATTGAAGTTTATTACCTG
CATTGCAAAATAGCAAGCAAACTCAATAGTCAAGACTCAAGACAAAGCCAATTGTAGGTA
AAATAATGCAACATGGACTGCACATAAAATCTCTCCAAAAGTGCATGAAGACAGGGTGTT
TAATGATGGTAGATGTCAGTAACATACAGTACAAAAACCATGAAGTCATACTTCTGCATA
AGTGTATTTCAAATAAAAACACCTTCAAAGAATGTGGTGCTCGGAGTTTGGGCCTTCCTT
CAGAGCCAAGTTCTTGCAATCTAACTAGAATTTCTTGAATTTGCAGACGATCGAGCAACG
GGGAAATATTTTTGAATGGATCAACGATGCAAAAATCAGGGTGCTCTTCCATAAACCTGC
TTAACAAATAGGGTGATAGTGAAAACAGAATGAGTATGATAGTTCAAATATTGACCTAAG
AAATTTCTGTTATAAATTTAGAGAGCAAGTTATCAGATGGTTGCTATTTGTTGCTAGAGG
ACACGAAAGTGTAGATCCACTAAATTAGTTTCTGTAATCCATTGTACCTTATAACTTCAG
ACATTCCTGCAGAAAATGAAATTCCCCTGGGAAAACTGATGGAGCAATTTGGATCAATGC
TAATGATCTCATCTGTCATTTTGTGGAGGATTATGTCAACTTCTTTAAGTTGAGAGGCTA
AAGGAAGTTCAAATGAGAGTGGGACAAAGATAAGTCCATTTTCACTAGGATAAAGGGGAA
ATGCTCCTCTCTGCAAGCAACATAGGAATAATGATGTTCCAGCAGAGATCAAATACTATT
AGTCAAGAACACATTATAGAAAACTTGCCTTGGCAAAGTCTTCCTCACGGGATGGTTTCA
TTGCATAGCCAACCATCAAAACAGATGAACTAGCCATTTCCTGCATGAAAGAAGACGTGT
AACTTCAAATTTAGTGCACTAATCAACCCTAAACCCCATGTTTTCCATCTGCTCTCTGCT
AAATCAATGAAAATCCAGCAACTGCTGGATCTTTCAAATAATAAAAATAATATGACCAAG
TAGACACAAATGACCATTTAACCTTTTTTATTAAAATACTCAAAGTGATAAGCAGCTCTT
GAAGCTTGCCAATATTTACAACTCCCGAATCTTTCGTTCCACATTCATTATCTGGATCAT
GAGAAGAATATCAATAGCCCTCAACGGTAATGTTAGGCCCTCTTTCCAATATGTAAAACA
TCATGAGTTACACCGAATATATATCATGGATGAAGTCCTAATCCAAAAGTGCTTGCTTAA
AATGGCATGAGAAGGAAAATTAACATCTCATCCTGATTTATGCTTACCTACAGCAATAAC
TCTCCAGTTATGGCTCTGAAGTTCAGAAAATAGATCTTCATCAACTCTGGAAGTAGCATA
AAAACAACAACTTGATCCGCTCCACTCTAACACCGACTCATTTAGTAAGTTATTCCCAGT
GGGAGCAGGTAGTGATATATATCCAAAGGAGTACAAGTTTGCTGTCATTTCAAGAAAGCC
TGACTGATAAAAGCAACAGAGAAGCCCCATGTAAGCGTATACTACCTTACGATGAGTCAA
ACACAGTGCTTGAAAAAAAAAATGTCCAAAAGGGGGTAAACATATACCACAGTAGTTGGC
ATTTCCTCCGGATGGCAAATTGCCTGGAACAAAAGGAGCAAGAAGATGCAGTCAGTTGAC
TACCGAGGTACTGTTTCCTGATAATTCACCTCAGATCGGACGAGGTGAAGAGGCGGGCTC
ATACCACGCCCAGATTGGAGTGGCGCAGCCGCCGCAGCAGCGCCTCCGCCCCGGGACGCA
GCGTGGGCACCGGCGCAGCCTCGTGCGGCCCTGCACCGCCGGAGACGACGGGATCGAGGA
GGAGGGACGCATCCAGCACCAGCCGCACAGGTCGCTCCATGGCCATGGCTGCGGGGTTTG
GGTCTCTCTGTTCAGCTTTGGGTGTTGGGGCCGGACTTGGAGGAAGGAGAAGCTCCTGAG
CGGTGGGGCCACGTGTGAGAGGTCCAGGTGGGTCCTGCGGCCGCATGGCGGACAGGTGGC
GAAATGCGGAAAGCACCTTAACGTTTTTATTTGTTTTCATTTATTCTTTAATAAGGCTGA
TAATGGCTAGTGTTGCAGGGAATCCGGTGCGTTGTGTCGAGGAAAAAGGACGTACTTCCT
TCTTTACCTATTAATAATAATAATAATAATAATATAATAATATAATCTCCCCTAATAATA
AAGCGTGTAGCGCTTCTGTCGTCCGTCGCGGCAGTTTTAAAAAAAAAACTTCTATTTCAG
AAAAATAAACCCGCAGTCCTTTCTTTCGTTAAAAAAACGTTTCGTTTTTATAGAAACACC
CCTCCCTAGCCGGCCTTGTCGGTGACGAAAATCTCCGGAGAGGAAACATCCCTCCCTAGC
CGGCCTTGTCGGTGACGAAGATCTCCGGGGAGGACGGGGCGGACGCGTTGAGGCGGTTCG
ACTCCTTGCCGGTGAGGCCGTCGATGTCGGGGCGGGTGGCGCGCAGCCAGCCGAGG