Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
No map location | ![](/morexGenes/blast_net_images/contig_49752_assembly3_WGSMorex_rbca.fasta-OregonWolfe_maploc.png) |
![](/morexGenes/blast_net_images/contig_49752_assembly3_WGSMorex_rbca.fasta-Morex_bigstats_maploc.png) |
Predicted Genes from contig_49752
Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
---|
MLOC_65100 |
1 |
427 bp |
AK370125 |
Not available |
Available |
None |
CDS Structure of MLOC_65100
Contig Sequence (6103 bp)
>contig_49752 6103 assembly3_WGSMorex_rbca.fasta
GAGGGAGAGAGGGAGAGAGAGAGATCTAGGTACTAGCTATGAACCCATAGGTCTGTGGTA
GATTACTCACACAACATCATGGGAGCAACAAGGTTGATGTAGAGGCCCTCTGTGATTGAT
TCCCCCTTCGGTGGGGGCTCCGGACGGGACCACGGCGAAACCGAGACTTGCGGCGGTGGA
AAAGGTGTTTCGGGTGGCTCTCTCGTGTTTTCTCGATTTTAGAGAATTTATAGAGGCAGA
GTTAGGTCAAGAGGAGACATGAGGTGGCCCCAAGGTAACAGAGCGTGCCTTGTTGCCTTG
GCACCGCCTCATGCAGCGTCTGGCCTCCCTCCAAACCTTCCACGTCTTAATAAAGTTTCA
CAACATTTGGACGTTTGGTACTGATTTCCTGAAAAGTCAAAAACACGCAGAAAACAGCAA
CTGGCACTATGCATTGGGATAATATAATAGCATGGAATAATAAAAAATTATAGATGAGTT
GGAGACGTATCAATCTCCCTCAAGGGTTTTCCTATCCCTTGATAGCTGCTATAAGGCAGT
CTCTTCCTTCTTCCTCATCTCATCCAAGTCAGCTTTGATAATTTTAATCCTATCATAGTC
AGTGGTAGGAAGAGGATTGGATACATAAAGGACATCAAGAATGTCGAACTCCATAAGGAA
GGCCTTCTTTTTTTCATAGCTACCTCAACATTAATACTCCACCCTTTGACTTTTTCCTCA
ATAATCTAGTTTCACAAAGCATGTTCTCACTAGAGCAGTTAGGGCCAGAGACGAGATTCC
AAACATCATGGAGTTACTGAATAAAGCGGAGTTGAGAAAAACACCATTTTTCAAACTTGA
CATTTTGGGGTCGTAAATTTTCCTAGCCCAATGTCAAACACCAGGGGTGTGTGGTCACTG
CCAACCCTAGGAAGAGCAATAAGGGGAGATAAGGAGAAATGAGTGTCCCAGTTCATAGAA
GTGAACACTTCGTCAATGACAGCAAACACATGATCACTTTGATTGTTAGACCAAGTAAAG
TTGTGGCTAGAAATAGAAATTTCTAAGGTCTCCAATCTATTAATCCAATCATTGAACATA
AAGGAGATCTCGAGGTTAATTAAGCCACTACTTTTATCAGCACCACTTCTAACCAAGTTA
AAATCACCACAAATGAGAATACAATATGAAGCATATTCTAAAATATCATGAAGCTCGGCA
ATAAAATCCATCTTGAATTCAGGATAAGAAGAACCATAAACAATGACTAAGTGCCAAAGA
ACATCATCCGTATTCTGAGTGGTAGAAACCACAACAGATTATTCATTAGAAAAAACAATC
ACATCAAGCAAATCTTTTCTAAGACCAACTAGAATGCCCAATAGTATTCACAGCAGGTAG
GAAATGCCATGTAAAATTCTCATGTTCGTCCAAAGCCTTGAGGTAACCCTTAGATATGGT
CTCGCGTTTTACTTTCTTGAAATCCAATAAATTCAGGAATAGTTTTAGCTATTGTATCCA
CAGAGGCACTGAACTTTACCAGGTTGACGAAGAACCCTTATATTCCAAATGAAACTATCA
TAACTATAAGATTTTGGAGTGGTGAGTCAAGCCACGAGGCTTAACCTTAGTGAAGACGGT
AAGAGATGATCTTGTCAACATCATCAATGATTGTTCAATTCTAGCATATATTCAACATCT
CTCTTTATCGCTGTTTAGTTTTGTATAAACCTCTTGTTTCATGATGGTGTTATGAGACAT
GGTGATACTTAAAAATGTTTGCATGTTGATAAAATCTAAAACCTTGGGGGCTATGAGGTT
ACCTGGTTTTTCGGTACCTTATTTCTCTTTTCGCTCTAGTCTTACTTTGGCTTTCTTTGA
ACTGATGTAAAATGGAAAACTGACAGTTTTTTAGTGGAAATTAACCAGGAAGATCATTGA
TTGTTATTTTTAATATGCACATCATCCAAATCAGGCAATAAATTAGTTGGTAATCCGCTC
TAACTTCCTAGCACCAAACTCGGCGCCTCCATACAAGACAGAAATTTTCATGTTAAAAAG
ATATCGTTGTGATATAACCATATGGAGAAGAAAACCACTGCCACGCGTAGAAGTATCAAG
GACCAGAGCGATATATTCATCCTCGTAACCATAGTCCAAATATATAAGATATACTCCTAA
TGTGGGTTATATTAAAAGATAGGTGTGCAGCATGCCAAGTAACTCTGAAATTTGAACATA
GCTTAATTATTATTGATCAACTGATTGGTGCCCCGTTATTATTGACCTAATTACGGGTTT
TTTTTGTGATTTGATGCATGTGTCTCTTTCGTTGGAGCTTTTTTTTTATTGATTTGTCCG
TTTAGAGAGTGACTTCATTGGCAATTACTTTTGTGTGTATGTGTTTACTTTGTTAATGCG
GTTTATGTCTTTGCAAAAGAAATTTGAAAATATATGTATATGGTATATAATCATAGTCAT
AACTAGTAAGTAAGTGCTTCTAAATATGACTCCAAATGCATTAATTCGATGTCACGTGGA
TCACATAGTTTTGTTGCCATACCGAAACTATTGTCATCCCAATGGTGTGCTGTTGTATGC
CAAGATCAACCGCAACGGACCAATGGCGCAGTTCAACTGTTGGAATTATTGGTTAAACAC
ATGAACAAGATGTAGTACCTAGCGAGGGAGAGAGAGGCACATTATTGTTGGAATTAATTG
GGCCACAAGATAGACATGCAAGACGTTAGACGGGGCGTACGTACGTTTGAGTATGGCACA
CGACATGGGAAGCTAGCCAGCATCACTGTAGCCCATTCAAGCGAGAGCATCCAAATCCAG
CTGGCTAATACAGTGGAGCACTGTACGTAGCAGCTGCTTATAATTTAACAACGCACGTAA
CAGTAAACCCCGAACGAACAAAACATGCATACCACACTATCTAGGCTAGTTCTGACCGCG
CTGCGTGCCACGTGGTTTGATTGGTTGGTGCATGTCGAAAACGAAAACGTTTACCTGTGT
ACCGTAGTTGGTTAATTAAAGTTAAATCACTTGGCTCTGATTTGTCTCCAACATATTGTG
TCGTTATCTCTGAGCAGCTGGCTAGGTAGGAGTAGCTACTACTACTATAGTCGATATGGT
TAATTAGTTAAGTGGTCATGGCCACTCTTACGTTCTCATGGAGGGAGATTTTTTTTATTT
ATTTTTTTGCGCAGACTCATGGAGGGAGAATTAATGGTGTGTGATTTAGAAGCATCACAT
CGAACCCACACGTGTGGTGCGTGCCCCATCCCCCATTGGCCATTGATGGCCGGATTACAT
GCATGCATGGCTGGTGATCGGTGACCCATCAGCTGACCGATGCATGCGTGCCAACCTAAG
TTTGGCCCTGCTCTAAGCCTAAGCTAGTAGGAGTTCTCACTCACCTTCCTCTTGCTTGCA
AAAAAATCAACAAGGAGCACCCACCTATTGCACAAAGAAAAAAAGTTAAATCAAATCGCA
CTTACTACGGAAACGGGCCGGGCAAACGGCGAGAGCGCCGTCGGTTGCGCGGCCCACGGC
CCCGCTTCCCTCCCCGGGGCAAAAAGACGGGGGCGCCCGCAGCAGACGGCGCGGGAGCGG
AGACACCCCAGCAGGCTCACATGGCGAACCCCTCGCCGTCTACCCGAGCGGTTCCCCGGC
CCCACCCGCCCGTGAGACGGGCTACGCATGATTGCGTCGGGTTCGTGCGCGCCCCCTTTT
TTGCCGTGCCGCGTTTCTTTTTTTCCCAGCGGAAAATCAGCGGACGTGTCGCACGCGCAG
CACTTGCACGTACTCGCCAAGCTCGATTACCTCAGAGAGACAAGCTTCCAAGGTCGATGA
TTTTGGTGATGAGGTTGTCACGCTTGTGACTTGTCACGGTCTCAAATGGACCAAATATCT
TATGGTTGGCAAATTGTACTGCTTTTGTGCGGGTCAGGGTTTTTTTCCCGCCTCCTTCTG
TATGGACCTGCCTGCTGCTACGGTTTACGTTGTTTTCTGAATAGAAACCCTTCTTTATCC
CGTCATAAAAAAAAAAAAGGCCAAAAAATGCCCCGCGCCAGACGCAGCTACGGGCGGAAT
GAAGAGCGAGAGAGGAGCATACGGAAAGGAAAAGAGGATATCTATATACATACAAAGACA
GTAGAACCCCGCAAAAAAAGAAAAAACATCGATGAAGGTGAGTGGCAGGCACGTGGGACC
GGCCCCGACAGGCGGACCCACCATCCCTGGCGAGCGATCGCGCGTGGTGGTCCCGGCCGG
CGGTCATTCTCGCGCGTGGGGGTCACGGTCGCAACAGCGCATGCGGTCTCTTGGCCTCCA
GCTAGCCTAGCAACACCAAAGCCCCACGTGACCCCACCTTTTCCTATTTCCCGCTGCCTT
CTTTTTTTCCTTTTTCTTTTATTATCGTGGTTTCGTTTCGGTGGTCGACCAGCAAACCGA
GCTGCACTAATACGCGCTTAATTGTTACTTTGCCTTTTGCTTTGTTAAGATTTCGGTCGA
TGATAATTGTTTTCAACGCGTTTAAATTTTGCTAAAAAAAATTATGCTTTTCTAGAGACT
GGTAAAGCAACTTTCTGATTTTGCCCACATATTGCAGGCCAAAATTTAGCATGAAAGCAG
AGCCCGTTCTACGAACCTATGCCCTCGCGTATCATTGCTCCTCAAAACCCTCTCGAGTTA
AATCCATGTGGCCTCGCTCATTCATGGAATTCGTTAAAAAAAAATGTACCTAATAAGTTG
CGATAACCATGAAACTTTTCGTGAGAGAGGGTCAAGCGGGCAAGTGAAACCCTAGCTGCC
ACCCCCACCTATACTCTTCCTTTTGTCGTCCCTAGGGTGTGTCGTCAACGACGCGAGGAT
GTTGCTACGCCTGTTATGGAGAAGTTGTTCGGTGGATGTGGGTTTGCGATGAAGATGAGC
GATTATGGTGCAATCTATGGGAGGTCACGCTTGATGGCGGTGCTGGTGATCCAGCGTGAT
GATCTTCAGTGCCGGACCGACCTGGCTCAGACATCGAAGAAGATGGTGTCGAGGCATGGT
CTTGGACGGTGGCAATCTCCACATCAGGCCCCCATCCGGCGTGTAACGGCATGGGCGATT
CATCTCAAGTTTTCTTTACGAAGTTTTCATGTCTGGTTTGGGCCGACGATGCCGTTGCAT
TTGCCCAACGTAAAAATATTGCCCTTCCCACACTTGTCCCGTTTCATTGATGTGCTTATG
GCGGGTGTGTGATGTAGATATTGATAATCTAGTCCTTTTTTGTAATCTAGTTATTTTTAA
TTAGTTTTTTCGTATGTGTTATACCTTATTTGTCTAATCAGCTATTTTCTTAGTTTATAT
ATATTCTTCACCGCAAATTATGTAAAAAAATAACACAATAAAGTGTTAATATACATGCGC
ATACGAACAAACACATGCAAATCCTATCTTTATGAGCTCTTCTAAGAGACTGAGCCGACA
TATGTTCTTGAGATTTACGAAGTCATCATAGGCACCTCGTCCTTGACGAAGACGTCTCCT
CTGAGTGAAAGCACATCGTCGAAAATACTGAAATAAATTCAGAAATAAATGTGAACATCA
GGACTTAAATTCTGATGGACTAGAAATATTACAGTCCCTCTAACCATGCCACGAAACATA
GTTTGGTCAGATTATAAAATAAGTTGGCATATAATATTTCATTACTAGCAAACCGAGTGT
AGGCGCCTAAACAAATGAATATAGCTCTAGAAAAAAAAAAGTAAAAAATATTAGCAGAGG
GGCAAGGCGCAAAAGAGGCTGGCCATGCATTATCATGGCCCTATTATTCTACACGGCCAC
ACCAACACCCTCACTGCCATTATTATTTCTGCCTGCCCCCCTCCCTCCTCTGCCTCTTTG
TCTATTTCCATCTGCATTTGCATCGCTCGCCTCTCAAAACAGCCAAACCGAACCCCAAAA
GCTCGCCGGGAAACGCAGAGAAAGGAACCGAAGCAAACCCAGCAGCAGAAGGGAGGGGCT
GAGCCAGGCAGCTAGCAATGGCGGCGGACCTGGGCTTCGAGGCGACCGAGCTGCGGCTCG
GCCTGCCCGGCGGCGGCGAGGGGGAGGCCAGGAGCTCCTCCGG