Contig Data
morexGenes
Links



Map Locations of contig_49737 (4949 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_49737

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65088 2 2375 bp MLOC_65088.2 Available Available LOC_Os01g63290.1, FRAME:-3, EVALUE:0.0, 13101.m06792 protein transporter, major facilitator family, putative, expressed





CDS Structure of MLOC_65088






Contig Sequence (4949 bp)

>contig_49737 4949 assembly3_WGSMorex_rbca.fasta
TTTTCTAATCAAATTCCATGTATAATANNNNNNNNNNGGAGTTACGGTTTAAAAGATATG
ATATTTTAAAAAATATTTAATATATATTACGAGTTTAATGTCATAGTAAAATCACCTCGG
TGGGTTTTCCGACGGAAGCNNNNNNNTCTTTATTATTAGGTAAAGATTATTGATCAGGCT
TCACGCTCTGCTGCTACAGGAAAGTTTACGTAAAGATTTACGTGTGTTTACGGGCTGGGC
TGGGCTGGTTTAACTATATTTAATTGGATTAGGTGGAGGATTAGGCCCACCCACCCTGAA
AATCAGGGGGGTCAGTATTAGATTAAGGAAAAGGGAGAGTTAGTACGTAAGATTTCGTAA
GACTTTTACGTAAGTCTAGCATTATTGAGCTCGAAGTGGCATTTTACCAACTCAATGCCC
CCTCTGTTTCACAGCACATCAATATTTGAGGCGACTGGGTATGCTGGCAGTTACAACCAT
TTTCCGCACATTAAACATTATATATGAACAGTAAGAAATTGCAATAACTATAGTTCTCCT
TCCGTCAATACAGATATATCATCAAACGCCGACTCAAGATAAAGTGAACGAACATTGCGA
AGCCAACAGCAAATTCCGGATATTTGCAGTAGCCTCACATTATGAGTTTAAATGCCCTCA
ACGACTTACATTGCTGTCTTTACACCCTCAACAGGTTCCCCACTTTGTTTGTGGGTTCCT
GGCCTCACCTTTTCACTAATCATGCAGTACATCTGCTAGCCATTTTAAACAAGGGCAACT
CTTGCCACAAAAACTACGCTAGTTCAAGCCTTTCAACTACGCTGGCAAATATTTTTCAAT
CCCTACCACTACCATTGCCAGTTTGCCACCCCTAAAGCATGACTCCTACACCGCCATTTA
TTCTCTGGCATGCTTCAAGCATCCTTGACTCTTGAAATTCACATTTCCGACTTATGCAGC
GGAAAGATTCACATGATCTAAACCTCTGACACTCTGCTTCCACAATAAGACAATTCACCA
CATACTTCCACTACATTGAAGCACACAATGTGGTAGTCCGGATGTGTAATGCTCATCTCG
GTTCATGGAAATTCTCAGTACTGTCCGATATGATAATGCCACAATACTCCCAGTGAATCA
TCAAATTGTTTACTATATGTTTCCTCTTTGGTGCTAGCTAGTGCCATCAAAATCAACACG
CTCTCCAGTAGCAAAGACATCCCAGAACAGGGCACTGCTGAAATATAGAAGTGATGTTAA
TGTTAAAAATCCACGGAAAGAACCCATCCGATCAACAAAGAATCCTGCTCCAATAGTTCC
TAAAATGGCAGCAAATGTTCCAGCCGTATTTGCCATTCCTGTTAGCACACAAACATAGAT
TAAATTTAGTAACGCACATGCACAAAATCTATAACTAAAACACAGAGGGCACAAGGAATT
TATTTTGTACCATGTAGCACTCCGGCATATTGTGGAGCGATCTCCTGGTAAGAATTTCAA
AATTAGTTCCATCAGATGGGAAAGAGAATCCAAACCAAATTGGATGTCGGGGGAGAGGGG
AGGGATGAAATAAAATTAAAATGTGACTACTTCGCACACTGAACTAATGAATACAAATTT
AAACACCTGAAAGTTTACAAGGAATCCTGAGTGACCAAAGGACTTCAAACCAACAGCAAT
AGTTAGCCAAGCTGAAGCAATGGCTGGACTCTTTGCTGCATTTAAACCAATAAGAGCAAT
ACCAGGACCCACAAAGCCAATTGTCTGCACAAAACAATATCAAAGGGTCAAAGCTTGGAT
TTAATCCCAGCAGCATATATCTACATTGAGATGACAAATTTGATTTTAAAATCAATATAA
TTAAATGAACAGCAGGTGGTAGCACAAAAACTTGTTATTTTCACCAGAGTATTCTACTCT
GATTTACCATTGTGATTGTGTTACGGATATACAATCAGCTATGATTATAATTATGCAAGC
TGGATAACAAAAAAAGGGTACATTGGTAAAGTTGTTGTTCATCAAGGGTCACCTATGTTA
ATAATTGCTTTGAAAATATACATGCCTTGCATTCCAAACATGCAATAGCTTACAAATTTA
GCATATGTAAGGTTGTTTCCAAACATACAATAGCTCACTTTAACTCAAGATCTTATTTAA
TATAAATAAATAAAAACGCAATGATGATTCTTCACTTCTATTTTAACCTGAAAATTTTCA
GCAACACACCTGCATTATCTTCCGAGTTAAAGTAATGCTTGTGCCATTTCGGATAAGTGC
ATCTGATACAACACCAGCCACATAACCTAAAACTGCCATCATGACCCAGGGAATTGCACT
AAACCATGCAGCTTCTCTCAGATTGACATGAAATATCTGACCACCAAGGAAAAATTTAAT
AAACCACAGGGAGAATCAGTTTATTTATTCAAGAAACATGCAGCGGAATCAGGGCTTACG
GTTTTGAAATACACTGGCATCCACGAAAGGATGACGAAATAGCCCTGAAAAAATAACACA
GCCCTCAAGAGATTACCCATAAACAGTATTCTTCACATGGCACAATCTAACCAAGAGTTA
AGTTTATAGGAGTTACCCAGCTATGCATAGCATTTGCAGAAATTAAAGCCCAGGTTGGCC
ATTTAGAAAGTAGGTTTCTAAACGGAGGGATCTTTCTTAGTTTTTCACCTTGAACTTGAG
GTTTCACCAATTTCTGACCCTTTGTTATATACTCTAGTTCATATGCTGATATTTGAGGAT
GTTCACCAGGAGTTCCTGTTATAGCAGACATCCACACCAGCACCCACAGAAATCCAAACA
AACCAAAAATCACAAAGGGTCCAAATGTTCCAGTTCGTGACATGATAATAGGGGAAAGAA
GTAAGCCGATGGTATTTCCAAGCTGAAAGCCAGCCATCGCGATCCCCACAGCACTAGATC
GTTCAGTGCGAGGAAACCACCTGTAAGAAAAGGCCCAATGTAAACGTTTTCATAAACCTT
GACTGGCAGGACAACGCGAATAAGCACAAATGTTAGGTTCTGGTAAAAGCATGAAGACCA
ATCAAGTGAACAGAAGTAGTAGGAATCAAAAGAAATACCTCAGCACCATATTGTTCATAC
ATGGCAATGCCACTCCTTCTGCAACACCGAGCAGAATTCTAGTCGAGATGAACAACCACA
GTGACCGTGCAGCTGCCCAAGGGGAAAGGAATGTAGCGAAGGACCATAAAGCCACACCAT
ACGCCATGACTCGCTTCCCTCCGTAGTAGTCAACAAGCGCTCCACCAATTATAGGTGATA
TCAGATATCCCCAGAGGAAGGATGACTGCATGAATCATCAAAAACACCAATGGCATCACC
ACATCATTCAAGGAAGAGGCACAAAGTCATACAGAAAACTAGAACAGTATAGGCAGTGGG
CACTCCATAGTTTGGTTAAGGTGAATAGGCATCTGGACTTCCGTGCTTTGTCAAATGCAA
TGGTTTGTACTCCCTCCGTTCCTAAATANAAGTCTTTTTAGAGTTTTCACTAGAAGACTA
CATACGGATGTACATAGACATACCTTAGAATGTAGATTCACTTATTTTGCTCCGTATGTA
ATCATCTAGTGAAATATCTAAAAAGACTTGTATATTTAGGAACGGAGGGTGTACATTACT
TTACAGCTGACACTGCCAAGGGAGGAAACTATGCATGATTTATGATATGGATAAAAGAAT
TAGCATGTGGGTCACTGATTTAGTGGAAAATGTATAAAATCTTATACCAGCGTGTCATCC
GAGCCACGCCACATCTGGTTCAAGTATTAAACCGTAATTGAGATTGAGCACTGGATCGCG
TTGTTAAACCTTAATCGTCGCAGTTGAGCATTCTATCACCAAACACAGTTACACAATTGC
GTTCAGTCACTGATGGAATAGTGGTGTAGCGTAGTGCAGACAATCAAGGGCAAAAAGAAG
AGAGCTGGGAACCTGCACGACGCCGGCGAAGGAAGGGGTCCATCCATAGGCCTGGGAGAG
CGGGACGATGGCCACGGACATGACGACGCGGTCGGCGTTGCAGAGCGCGAGGGCCAGCCC
CAGCATCGCCGCCACCTTCACCCTCTCAGACGTCATGAACTCCGCGGCCAGGGCCTGCGC
CTCGCCTCCGCCGGCGGCGGAGGCCCCGGGAGGCGGAGCAACGGGACGGGTCCTGTTCCT
GGGCAGAGGGCGGAGCGGCTGGAGGGGAGCCGGACACGGGGGGCGGCGGGGCTGCCATGG
TGGCCGAGGCGAGGTTTGAGCGCGGGCGGGAGGAGGCAGGCGGCGGCGGCCGGAGAGGAA
GGGGGGAGCGGAGGGAGGCAGAAGCGAGCGGGTCATGGGGAGCAGTTGGCCGGGACCGGG
AGGGGCCATGGTTTGTTTTCTCCGCCGTCTGGGTGCGCTCTGCCGGAGTGGAAGCGGTGG
GTGGATGATTCAGGTGAAGTGGATTGGTGCACGGTGACGTGTAAGATTTACGGGCTCCCT
TTGTTCACGTTTTTCTTTGTTTTTCGAGGCGAGGCTCCCTTTGTTCACGTCGTCCGTGAT
GCCGGCGTTGGTTGTTTGTTCTGCGAAAAAGTTCATTTTAAACCCAGAATTTGTAAAGGT
TTAGTAAAATGAACCTTCAATTCAAAATTTCTGTCGGTTGCATCTTAAATTATGCAATCC
CGGTCTAAAAAGAACCCTGGGTTCGTTTGGCAAATCGGAATTGTTCATTTGACCGGGATT
GGGCTGGGCTGCGCTGTTGACTTCACAATATTGACGGAAATGAAAAAGTGAGAAAAAAAT
TCACGAATTTTGAAGAAATAATCACGGATTTAGAAATAACACGTACCATTTCAAAATGCC
ACGTATTATTTTTATAATATTTAAATATATTTTAAAATGCCACGTACTATTTTTATAATA
TTTAAATATATTTTGAAATGCCACGTACT