morexGenes - Barley RNA-seq Database

Contig contig_49726
Source Contig contig_49726
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_49726 (7843 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location
Predicted Genes from contig_49726

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_65081	2	1713 bp	MLOC_65081.1	Available	Available	LOC_Os09g23550.1, FRAME:-2, EVALUE:0.0, 13109.m02226 protein dehydrogenase, putative, expressed
CDS Structure of MLOC_65081

Contig Sequence (7843 bp)

>contig_49726 7843 assembly3_WGSMorex_rbca.fasta
CGGCAGGGGTTGCCGGGCCGGCCAAAAAGGTGGCCGCCTCGTCTTCCAGCCGGCGGGTGA
TGCCTAGTCGGTGAGAAGACTTGGGCCTTGGGAATCTCCATATCTTCGTTTTCATTGGGC
TGGAAATGGAGGAACAGGCATGATGAGCCTACCCCGGGGTTATCCCCCCGACAACGGGTA
GGAAATGTCCCACACCTATTCTTCTTATGGCTTTAGGAGGAATTTCATCACGTACATCAT
AAAGACCACTTTGCTCCATTTGGGAGCCATTATTTTCATCAAACTCCACATTACATGTCT
CCTCATTGATTCCAATGGGATTTTCGAGGACACGGTAAGCATGAGAGTTTGTCGCATAAC
CAACAAATATGCCCTCTTGAGCTCTTTCAAACTGAGACAAATGAGCATCCTTTTTGAGAA
TGAAACACTTACAACCGAACCCCCGAAAGTACCTTAGGTTGGGCTTGTTATCGGTAAGTA
TCTCATAGGGAGTCATGTTCAAGACTTAGCACAGGTAGAACCTATTGGATGCATGGCATG
CGATGTTGATGGCTTTGGCCCAAAACTTGTACACGGATTTGAATTCCACCATCATGGTCC
TTGCCACATCCATCAACGTCCAGTTCTTCCTTTCTGCGGCGCCCTAACAGTATCCCTAAC
ACCCTAGTGGCAATATAAGTAGGAGAGTGGGGGGAGTGGGACATACTAGCTCGAGAGGCG
TAGACGAGCTCGACGACGGGAAGAGAAGACAGCGGGACAAGACGTATCGCATGGGGCGAG
GGGGCATGCTGAAGAAGCAAATAGAATATATGTTTGTTTGACTTAGTGGGGCCGTGACAA
ATGGTTTGGTGTGGGGGAGAATTAGATTCTTCACAATTATGACACGTGTGGCGAGCGGCG
CACAACGCCCGTCACTTTGAATTTTTTGGATTTTTAAAGTTTTATACTTTTAGTTGCCTA
AAGACATGTGTGGAGGGCTCTTTGAGATGCCCCTCACTTCTCGTTGGTAGAACAGTGGCG
ACCACTTCATGCCCCACACCACTATAGTTTTTCACCAAGAAGGGATCTTGAAGGGAGTTC
ACCTATGGCGGGTACGTAGAAACACCTGTCACTGCTATGACTATAACAGTGGTGGGTAGG
TTTAAGTACTCGGCACTGCTATTTCTCCAAGATAGCAGTGGTGGGTGACAAGTCTCCCCC
ACTACTAGTTGGGGTTCACCTATAAGCCCTTTCCCGGTAGTGCATCAGCCATCCTTCGCC
CTCCAACACCTCCCATATCTCCCTTTTTCACTTCCCCCTCCAACTCTAGCCATCTCTCCT
CTTTAGCATATAGGTATCACTTGTCTATCATTTTTACTAACATATCTAAATATCCCTTGT
GGGGGTTCTCCTTTGCCACCCAAGTTTCCATCGGGAAAGGTAATATTATTTTTGTTTGTC
ACGATTTTAGTTGGAAACAATGAGGACAAAGGAATTGTTTGTGAGTAATAAATATGTGTA
TATATTGGGGATCGATCGGCTAATGGATCATAGTTGGATATATGATGGTGGTTTCCATGT
GTCTATGAATGACTCCTTTGAGTGAGGAGCGAAAGGCTACCATGAGGACGTGATGTCCAT
GTTGTCAATGCAAAAACTTCAAGATGCACAAAAGTTGAAATATGTGACTTTCACATGCAC
CTCATGGGTTGGGGTTTCATGGCGGGTTATATGCGATGTAGAACTAATGATGAGGAGAGC
CTGAAGCATAAGGGGTGGATGACGAAGATGTTGACCATCAAGAGGCCAAAGTGGATACAC
GTGGAAGGGGACCAATTTGGATGGAACAGTTGAGGACTCTAATGTACAAGAGGGGTTGTG
ACACAAACGAATAAGGATAGAGCGTCTCATAAGGGGATGTGAAGTAGGAGACATGATCAT
AAAATGTGAAAGGGTCACCGTCAACTACTAGAGTTGTTTGACTTATAGTTTGTTGCGTGA
TATATGCATTTTGCATCATGTTTGAGAGGACTAGAAACATGTTGGTATACGTGTTTTTGT
TCAAAGTCCAATTATTTCTTTGATTTTTGTTGCTTGGATGTCATAAGAACACCTAAGGAT
TTTTCCTGGTCTTTATGTAAGCTAATCTCACAAAAACTCGACAGCTCTATAGGCCTGGTC
ATTTGATCTACAACCTCCAAAAGCATCGAATGATTCATACCCAAAAAGGCACACAAGGTT
GCATCTTAAAAAATCTTTGTTGTATATTGAACTTTTGGACAAACAAAATCCGAAACTACA
CCATGCATATTTCTTTGGGAAACGCTTCCTACCATACACCTGATACGAGGAATTTGTCAG
GCTGTTCAACCGACGTCGATTTTTTTTAATCACACAGCTTGGTTGCTTTCCAAATCCTTC
TTCTTTTTTTCAATTAGGTATTTTTTTTCGCCACGACCCCCTATAATCTCTTGTCAGTTT
CTATATGCCGGATAAATCTCACATACGCTGACCCATATGAATCCTCTTCCTTGGCTCGCC
TGTCCCGAGAACTGCTCCATCACCGAGCTCGCCAGACCCCTCGACGCCAGAGCTTCCTTC
GCTAGTGACCAGCATGTCCCGCTCCGGCCTCCGCCATCGCAAAACTTCATGTTCGTCATG
GCTCCCGCAGACTACGTTGGTCAGGATGTCGATGGCGAGCGGGGATGAGGAGCATCTCCT
TGGAGAGTACATCTGCAAGCCATCGACGAGAAGCGTCGGCTAATTCACCTCGATGTGCAT
GGCTGAGATCTGCTGAGGCGTTTGAATTGATGGTGGATCTCTTGCATGGTGAGCGGCCAT
GTGAGATCGATCATCTCACCATATGGATCTCATACACGACGTCACTTTCCATAGCATCGG
CAACTCCCCCATCTACGCTGGGGCACCTTGGCTAGGAGTCGTCCTAATTCTTGCGACCGA
TCGGGTCCTGCTGTGCTGTCGGCTGCTACCACAAGGAGTTCGACATCTTCAGTCCATGGC
GACATGGAGACGTTTGTTTGCATGTTACCTTGTCAGAGTCACCACTGCCTTGGATGCTTC
GTACCATTGACACCACTTGTTCCTTGACATGTCTTGTTGTGTACCTGAGAGTGGGGATGT
CGTGTTTTGTTGTCATGGATGCAATGCTTCGGTGTTCTGTGCATTAAGTTTCCTAGTGCC
TAGGCACGGGGTTCTTATGGTTTTAGTAAGACATACGTGCTTCGTGGAAATACATGGCAT
GCTTCGAGCTTATGTATAATATGTTCTCAAGTATCTACGTAATTGCTTCCTTCTTTTACA
AAATCACAACAATGCATCGGTACTACCTAGTTCATGCTTCAACAATTATCAAGCAATGTT
TCCAGTGGCTCACCAACACATAAATGCATCAATATTACATGACATGGTTTCAACCATCAT
AAAATTGTGCTTCGGAATACAAGCGGACCTGCTTCATAGCACAAATTATGAAGCATGGTA
TGCAATGGTGGAAGCATGTTTGTCTTATGATGGAAACAAAGTATATATATGGAATGAAAG
GATATGATAACAGGGACCTGGAGCGAAACTATATATAGAAGCAACATAAAATTAGAAAGC
ACGTGACTACATTGGACTCTAATTTCATAGCCGGTGCTTTAGATCGAAGTAAGCTTCAGA
TGCGTCGGAAGCAACATCAGCAAATAGTAGAAAGAAAATATCATTGATGCCATGTTTGGA
AATAATTTTTCTATTGTAACTAATTTATTTCACTGAAATCTATAATGATTACTTTCTTAA
AAATCGGCAATTGTGAGTAATTTACGGCTGCATGCAATTGTGAGTAATGTACGTACATTG
GTTTCTGTTTAGGAAACTATCACGCCGGATGGGCTGCATGCAGTCATGTCTCATCCACCA
CTGATCACATCTGACGGCTACCAACTAGTCTGATAGTTAGCAAATCACCAGTAGTCTGAT
GTCTAGCGCTGCCCATAACTAAATAACGAAGACGAAGCTCCACGCGAGAGCACATCCACA
CAAGACACAACAGTGGTTTAACGGGCGCTGGGCGCAGTTACTAAGAGCTCTAAATTCCCT
GAAGAAAATGAACAAGGTGGCTATTCCAGCTCACGAGGTTGAGCCGAGGCTGCCCGCGAT
GTCGATGACGAAGCGGTAGCGGACGTCGTTCTTCGCGAGCCGCTCGAGCGCCGTGTTGAC
GTAGTCCATCTTTATCACCTCCACCTCCGCGGTGATGCCGTGCTTTGCCGCGAATTCCAG
CATGGCCTGGCAGTCCCTGATGCCGCCGACGCAGTTCCCGGCGATGCCCTTCCCGCCCGG
CACGATGGCGTACGCCGGCAGCTCCAGCGGCTTGGTCGGCCCTCCCACGAACACCATCTG
CCCCATCGGCTTCATCAGCGCGAACAGCGGCGAGATCGGGTGCCACGCCGACACCGTGTC
GAGGATGCCGTCCATGGTGCCCACGGCCGCCTGCATCTGCTCGGGGTCCCGGCTCACCAG
GAACTCGTCCGCGCCCAGCCGCTCCAGCGCCTCCTCGCGCTTCCCGGGCGAGGTGCTGAT
GACGGTGACCCGCATGCCGAACGCCTTGCCGAACTTGACGGCGACGTGGCCGAGGCCCCC
GAGGCCGACGACGCCCAGGTGCTTCCCCGGCGCGTTCAGGCCGAAGCGCATCATCGGGCT
GTACACCGTGACGCCGGCGCAGAGCAGCGGCGCGGCCTTGTCCAGCGGCAGCCCGTCCGG
GACGCGGACCACGTAGTCCTCGTTCACGAGCATGACGTCGGAGAAGCCCCCCTGGGTGAC
CGCGCCGCCGTGCTCGGGGTCGATGCCGTTGGAGGTGAGCACCATGCCGGAGCAGTAGTT
CTCGTACCCGTTGCCGCAGCACTCGCAGGAGCGGCACGACCCGACGAAGTAGCCCACGCC
CACCGTGTCGCCGGCCTTGAACTTGCTGACGCCGCTGCCGACGCTGGTCACGACGCCCAG
GATCTCGTGCCTGCCCAGCCCAGGCCATTATTTCACTCCAGTACCACGACAAATTGTGCT
AGCACTCCATTATGTCGAGGGATTTAATTACCCGGGGACGACGGGGTACATGGCGGTGCC
CCACTCGTTCTTGATGGTGTAGAGGTCAGTGTGGCAGATCCCGCAGTAGAGCACCCTGAT
CGTCACATCGTCGTCCTTCTGAGCCCTGAAATATTGTAATCAACCGTGAATGACTCCACC
AGCGGCTAAAGTCGACGCGGCAAAGCAGAGTGTGCCGCGCACAGAGAAACATAGACGGCA
GATGAACTTGCTGATGGCGAGGACACAGTCACACGCACCTTCTTGAGAAGTCGAACGGGG
AGAGGACACCGGAGGCGTCTCTGGCCGCCCACCCGAGCGCCGCGCTGCCTTGCGCCGCCT
CCTGCGCCCCCACCTCCTTCGCCACCGCCTTCGCCATGTGGGGCCGCAGGGCTCTTGACG
GCGACGCAACAGCGACGCGGACGCTGCTCGTCAGATGCCTGGGCTCAGTGGGCGAGAACC
GGGCGCCGAGCTCGCCGGGGAAGAAGGACAGGGGAAGGACCGAGTTGCGCAGGTGGAAAT
GTTGCGACATGACGCCCCAGTCCCGCTGTACGATGACGAGATGTTTGATGACGCCCTGCG
ATTTTTCGGTGCGCGCTTGATATTTTTGCGTGGTGAGCAGGAATTTGAGTGAGAGTAACT
GCACTGTTGTGGAGCTGGCTGCGCATGTGCTGCTCGCAAGCTTATTGGTCACGTAGGATA
AGAGGAATCCGTGGCCCTGGAGCAGGGCGGGGGTACTTTCTCAGTTTAGGAACCGGGAGC
AACTGAAAACAAGAGTATCTTCCCTTAAGAAAAAACAACAAGAGTATCGTACGTGGAGAT
AGCAAAGAAAAAAGGCAATGCTATGCGTCGACGAGCCGGTCCAATGCTTTGGCCGATTAC
ATCTCATTCTTTGGATGTGAGCCACGACGACTGCTAGATCCTAAAAAAATACGGTTCGCG
TTGCACCTTCTTTCTGCAAAAAAAAAAAAAAAAAGTTTAGCCCCGACACCTTCTTCTTCC
TCGGTCTGCATCCACATTTTGTCCTCACAAGTGGCCATCCTCATTGTTGGTCTCGTCGTC
GGTGCCCTTGCCGACCATCCTTGTCGTCGGTCCCCACCCTCGCTGAACGTACTCGTCGGC
GTCTCGATACACGCAACAGCTACGCCCGTCGTTGTAGCTTTCAACGATGACGTTTGAGGC
AAATACACAGTTGGTTGAAGCAAAAAAACATTGCATCGTGACAATGATTGCAACAAACAT
GGTGGCCGGTTCCAGCAATTCGAAATGCCAGTTGTAGCAAATCTCGAAGCCGGTTCCAAC
ATTATCACGGTTGCCCGCCTCCAGCCGCCCACTACGTGGGTTGACTCTCCCTCGGGGGAT
GTAGCAAATTTCCATCACCGTAGTAACAAAAAACTAGCACGGTTGTAGCATATTCGTCTA
CTGGTTGTAGCATCTCTCATGAGGGGTTGTAACATCTCACTGCCGGGGGGTTGAAGGTGT
TGTTGGCACATCCATGACGACTGCTGCATCACGGTTGGTGGGGGAGGGTATCGAGACGTG
TGGTGTGGGAGACGGCGGCAAGCTCGCCGGAGGAGAAAAAAGTGAGGAGCGGGAAGGGGA
TCTCCCCCGTGCTGACGGGAAAGGGGCATGACTTCATGACAGCCGACGGACCAGTCTGGC
AAGGGAGGCTCGTCAGCTTGAAAGTAGAAGGAATCTAACCAAAAACGCTTAGCGAAGGGA
CGGACGAAGATTGCAGTCCATCATGAATGAGAGTTGTGGTGTTTTTTGTCAAAATAAAAA
AGGAACGGAAAAGAAATATGCGCGCGTGGATGAAGGCGGCCGGCCAAAACTTCAGCCGAC
ACACTGTTTCCAAGCATTTACCAAAGGAAAAGCAACGTAAATGAGATCATGTTTCTTCAG
TGTCGGCCGTGGCTACACTGGAATCATGATTTGATAGTAGTTCGAAAGATAGCTAGTTAG
GGATTGTTATTTTTTTTATCAGCCATTGAAGAGCAGAGACTCTTGGCGTCAATATATACC
ACTTTGTTCTGCTTTAACTTAACTAGCAAAAAAGACCGTGCAGTGAAACACTAGAAACAA
AAAATTACTCGCCTAGGGCGCGCTTGGATTATCGGTTTAGTTTTAATACGGGTGTATAAT
TGATAGAGACCTCAGACAACCGTTTTTATTCTGGATGGAAATCATACTACGATCGGTATT
ATACACTTATAAATTAAATCCGGATGTATAATTTACACCTATTTCAAACGGGGCTCTACT
CTAATGGTTCAAGACTATTTTTTGCCACTTCACTCAAATACACTCTCTATCTCTCTGTAT
GTGTCACTAATGCATTCTTTGGAGCATCAGTTATGTAATGTATTTGTCAACAGTCTTAAA
CATACAAAATCGATGCGTATAAAGTGCTACACTTCAATTATAAAACAATGGAACAACTAA
CTTCAAAGAAGTGGATTTGTGTGTTGGCGTCGATTATAGTGTCTTTTTCTCTAGAGTCAT
ATTCATACCTTTAGAAAAAGATCAACATGTTCAACAAATCCTAGTATATCTATGCTTTCC
TAAACAATCACGTTACTTAACATCTCCCCGCAGTCACAACGGTAACGACGCAGACGGTGA
GACTGGAGAAGAATCTGGAGGTAAGACAACGGTCATCCCCCACAGTCGTAACGATCGATG
CATCATGGAAGTTGTAGCTGAAGTGGAAACCGGCGAGGTTGCTCAAGCAAGGCGGTAGCC
CTTTGTGCATTGGTCGAGGTAGCCGAGAGCGTAGGGTGGTGTA