Contig Data
morexGenes
Links



Map Locations of contig_49637 (5524 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_49637

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_65017 2 948 bp MLOC_65017.2 Available Available LOC_Os04g42380.1, FRAME:-3, EVALUE:9e-103, 13104.m04179 protein ribosomal protein S17, putative, expressed





CDS Structure of MLOC_65017






Contig Sequence (5524 bp)

>contig_49637 5524 assembly3_WGSMorex_rbca.fasta
CCCGCCCGCCTCGCTCTCGTAGAACGAGCCTCCGGCGCCGCCCCGGGGGTCGCCATACTA
TGCGTGCTGCTGCTGTTGGTGGCTTAGCGCGGCCGCAGCCGCCGCAGCGTGGAAGGTCGC
CCCTCCGTCGAACATCTCGCGATGTACCACCTTGCCCCGCCATCGCCTCCGGGCATGTTG
CATCAGCACCAATTCCCTCACCGCCCTGCCCTCTTCAAACCCGCCGCCTCACTGCTCCTC
TATCCCGCCTGGCCCGACCACCTTCTACCACCACATCACACTGAGACCCCACGGCTCCTC
ATATATGGGGATGTATCTGGTGCACCGTATCCCCGTTGCACATTCTAAAATGTTCGGAAA
AATTCAAAAAAAATAGTGCATTGACACAACATAAATGTATGTTGCCACAAAAAATCAAAT
CAAAATTCAAAACATTGCCTATAGTGTCGAAATTGAAGATGGATCACTACTACAGACAAC
GTGGACAACAGGATTGATCACGTTTGTTGTTAATAGGTGGATATTGTGGCCGTATAGAAA
AAATGCAATACAAATAGAGCACCATGTGTGTAAGGATTTGTTTTACCCGTTGCAACGCAC
AGACATTTTTTGCTAGTTGATATATTTTTTGTTACTTTTGCTATTCTTTGTACATAGCAT
TTGGGAGCGCATGAGTATCTTACAAACGTTCCCTCGGGGTTACTGTTACCATCATTGTGC
TACTTCGGCAGAGTTCAGAGTTGCGTCCAAACCATCCTTGCCCGCTTGCTTACGCAAGTG
TTCTGGAGCCACGGCTCGCGACACGGAATGTTATCCGTGCAAGGTGCGATCTCTAGTCTC
TCGTGTTGAGCTCCCGGCTATCATTCAGGAACAGACTTCCTTCAACAACAGATAGATGTG
ATAAATCAGCACTTGCGTGCTGAAACTTTGTTGGTAGTACTAGATAAACATTACAGACTA
AATTCAGATTACGTCACAAGCAAAAGGCCAAAAAGAGTGATGTATATTAACGAGTAACCA
GGTAACAGCATCAAAAATCTCCTTCACGAAGCACTCTGAACATAACTTCACTAAACCCCT
CACTCTTGACTTGGAAGCTTGGAGAACAATCAAGGCAAAACCCTCGTACACACAGATGGA
AGAATATAGATGTGACGTCAAAATTTCATGGAGAAAAGGTTTCAGAGAAAAAAGGTCATG
ACTTGCTCAGACACCGGTGAACGCCTTCTTGACAGCACCACTCTTTGACCCTGCTGGGAC
GACCTTCAACACATTGAACCGCACAGTCTTGGACAGTGGCCTACATGGCATGATTTATTT
AACTCAGTTACAAGCAGTGCTCAACAGATAACGCTACATGTTTCAACTCTCAGTCAGTCA
ATGTGATAATGAGGTCATGCCATGCCGCATTTAACCAAAAGCATGTCGATGTTCACAATT
TATCTAGCTAGCTAGCTAATGTCTGTTAATGATGTCAATGTGCAGGCCCATTACAAAAGT
ACATACTACTATTTTTTACCTGCACTGGCCAATGATCACATGATCTCCTTCTCTCACACG
GAAGCAAGGGGAAATGTGGGCAGGGATGTTGGAGTGCCTCTTCTCGTACCTATTCACGGA
TATCACTATATTGCTTACGTTGCAACAATCAAAACAATTAAAAACCAATGAAGAAGATTA
GCTTGCCTCTGGTATTTTTTCACATAGTGAAGGTAGTTCCTACGAACAATGATGGTCCTG
TTCATTTTAGCACTATGACATGTTCCAGCAATGATGCGACCCCTAATTGACACAGTGCCA
GTGAATGGGCACTTCTTATCAATGTAGGTTCCTGAAACAAGCCAGATTAAATACACAAAT
AGCTTGTGCAATGTACAGACTAACTAGACAAACAATAATGACTAAGCACACTGTGACCAG
ATGACAATCAAATATCATGATTCCAACAAATTTTGAGACAAAGCGTGTTTCAAGATGTCA
TGAAGAAACTAACTGAACAAAGATTCACTTGATTAAGATGGCAACTGAAGCAAAATTGAT
CAATCACAAATGATAAATGCAGAAGTATATTCTTGATCAACATCTAACTTTAAAGAACAA
CAGATTATATTGATATGAAATCACATAGATAAAGAAGAAGCAAAAGCATAACAAGGTCAA
AGACAACTTCATGTATTAACAAGCACTGCCCTTTCTATTAGCAGAAAAGAGAGTTCATGA
ACGAAAGATCACCAACAACAAACAAACACTGCAGTTTAAATTGCGTCAGATGACATATTG
GTAAACACTCAGCAGTTGAAAGGCATTCAGTTTGAAAAGAAAAGATAGTCGAACATAAGA
CAGAAAGCATCAGACAGCAGAGGAGGAATTAATATAAACTTCCCAGGCAGGGAATCCTTA
GCAGCAATAATATGGGACTGGTGCAGACTGCAACTATTTTTACTTGATAGTGTTTCTGCC
GGGTCTTGGAACTTGAGACCTCTTGTTGGCTCTATACCATATTAAATTTGTGTACCAGCG
AATTCATTCAATCCAAAAGTCCAAACTGATGGAGAAGTGGCAAAATGTTTCAACAGAGAA
TATCAACAAAATGTATGTTTGACACAATATTTTCATAAACAGTAGAGCACTGCTAAAAAT
AACAAACTAATGAAACATATTGATAGCACGAGCACAAGAGACTGCATAATAATATTTCAG
AACAAGTAAAATTAATGCTCACTGCACATCAGCATTGCAAGTCATAACAGATAAAACAAT
GAACCTCCCCAAGTTGCAGGCTATACTGACCTTTATGGTGTAGACAAACTAAAGATGTAT
ATCTAGCTAAAAAGCATAAGAACATAAGAAGAAGAAAAATAATGAATAAATGTCACATGC
TTCAACACGTCCATGAGTACAAGGCACTTAATAACATTCGATGCTACAAAATGGACAAGG
CAGCACGCCAACTTATCTATCACATTATAATTGGAAAAAGGAGTGACAGAACATACCCTC
AATGGCTTCCTTGGGAGTCTTGAAACCAAGGCCAACACTCTTCCAGAACCTGTTGCCCTC
CTTGCCAGGCTTATTGTTCCCCTTTGTGGCCTTCTTTGAGCTGTAATTGCAAATTAAGTC
ATGATCACCAACTCAGGACACAGATTTTACCATCTTACTTATATAATGTAAAAATAACAG
CTCCTCGTACCAGAGGAACACCTTAGGCTGCTTCAGGAAAGCCTTCTCAGTCTGCAAAAG
CCAGAAAAACTGTTTAGGACATGTTTGGTTAAAGCCTGAGAATACCTAAAGCATCCCAAA
CATTTTGTCTGATATGGCTACCATGTGACAAGAAATATAGAGCCGGTACCGTACCAAGCT
TATCCAGGAAGCTAAGCTTATTGACTCATGGCAATGGGGATTAGAGGGTGACAGTGAACA
GAACAATAGCCTAATTTTCACAGGTTAATGGAATCCATCTACGACTGAAACTAAAGAGTC
CGCCTACGGAACATTGGAATTAGCAAATGCAAGGATGCAGTGATCAAACGTATATATGCC
ACTACGCCCACTATTTTGGAATGTCTAAGTCTCCGGCACTAAGCGATAGGCGAAGCGAAT
GGACAAAAACTATTCATAGTTTGTGTCATACCAATGCTGGACTTCAATATTGCTCTACTT
TGTTAACACCTAAAGTACCTACCGTGCTAGATCTAAATCTTGTATCAGACTAATCAATGG
AGAACAAGGGAAAAAAATCGTCAAAAAATAGATAATTTGACTCAAAGGAATGTCCCAGAG
AACTCAAATTGGGCAAACAAGAGAAAGTGGAGACGAAATTAAGTGATAGGATCGACATAG
CTGACCTGCTCTGCCATGGCTGATGCTCGAAGGCGATGGGGCCGACGGCGGCACGCACTA
GGCGGCGAGAGGCGAGAGAAGGCGTAGCCGCGTAGGCGAGACAAAAACCCTACTCGTCGC
GCTGGTTTATGTACGCAAATCAGATGGGCTCTTGCGGACCTGGGTCTCGAGCTGGTTTCC
CCCAGTTGGGCTACTCTTTTTAGATGGTTGGCCTGCCTTTAGTCACTCGTTTTTTGCCTA
AAAACAACATCACTTGTATTGCTAACAAAAATATCATTTGTTTCGATTTAGCTGTCACCA
GCATGTTTGGCTTGGCTGACCACATGATCCTGTAATGATCCCTATAAACATCGCACTTGA
ATAAAGTGGGACAATGTTTACCTAAATAATGTGTTTTATATTTATTTCAGTTCATTGATT
TGTTTTTGGTTATAATTATGGAAAAGTCTTTGGATCAACCCGTGGATCTCGCGAAAACGT
CCACCACATCGTATGCTCAACACATGTCCCTTGGAACCACTTTTGTCTCTGAAACGCCAC
ACCTTTTCTTATCCAGTCATTCATCCCAATCATATTCGTCTTCGTCGCCTACCATCAGGG
CATCGCCGCCGTCGCGTTCCTCCTCGCCTCGCTCGCCACCAGGGGGATCACGCTGCGCCC
ATGGCCGTCGGCTGCTGCGCCGGCTCGTTCCGCCTCGCCCTGGATCAGCCCTCGCTCCGA
AGATACAGACCAGCACGGCGGCGAAGCCCTTGGATGCGGCCCCACGGACGGGGCTGGAGG
CGGAGGCGGCAAGGGCGCTCAGAGAAGAGAGATCGCCGAAAGATGAAGCGTCTCTTCCCC
TCTGCTTCCTTTCCCTCTCCTTTAACCTTGCAGCCATTCATCGCCTCTCCAGTTTTCTGC
AACGCGGTCGTTGTTTCTGCAACGCGGTTGTTGTTGCAGGAGTTGGAGAAATTGTTTCTG
CAACCCGTTCGTTGTTTCAGGAATTGTTTCTACTACCCCTTCGTTGTTTCAGGAATTGTT
TCTGCAACAACAGCCGTGTTACAGAAAGACGAAGGAAAAAAATCTGCAACAAAGCGATTG
TTTCTAGAACTCGACCTTTGTTTGAGGAACTAATGGGTCCAAAATTTATTTTTTACAACA
AAGCGATTGTTTCTACAACTCGACCGTCGTTTCAGGAATCACTGGGTGCTGGCCGGAGCC
CCGCGCGCGGATCGGATGGACGGATCGGACGGCTGTACATCTAGATCGGACGACCGTCGA
GGTGGCGGGTGTTTATTAAACATCCGCCGGTGAACGCGTAGTAGCCCCCCATTATTGCCT
TTCAGGGTATTAGAATTTTTACAATTATATTGTGAATTTTTGGTTACTTCGATAAATGTA
AATGTATACCATTTCAAAGAAAGTTTATTAATTAAGTTATCTTTATTCTATGGTCAATTA
TTTGTTTCACCACAGAAAAAATATCAACGTGAATAAATCAACCATGCATCTCTAGGTTAT
ATCATTTTATTTATCACACAAACATATTTACTTTAATAGATGGAATACAATCCGGATACA
GGTATAAAAAGGATTGTTACAGTACACATGGCACAAAAGAATATTGGAACCAGCAGCGAG
CTCGGCGGCGAACACCAGGACCGGATCTCCGCGCCCCCAATCGCAGAACCGCTCGCGTCG
CCTC