Contig Data
morexGenes
Links



Map Locations of contig_49585 (4754 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_49585

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64974 3 2099 bp None Available Available None
MLOC_64973 3 4126 bp None Available Available None





CDS Structure of MLOC_64974






CDS Structure of MLOC_64973






Contig Sequence (4754 bp)

>contig_49585 4754 assembly3_WGSMorex_rbca.fasta
CGCTCGGCTGCTAGTGTTAATCGTCCTAACCATCAGAATCAGAGTGTAGATCAGCTGATT
CTTGCCTAGTCTAGGTGTGAATTTGGTCTTTGAAATCCAACTTGACCAATGGGGCTATTC
TCGATGTATTCAGTGTCTGAATTAGTATTACAGTTCTACTATTTTTCAGCAGTCTGGAAA
TGAATTCGTTTCAGGCCATTTTTTAGTCCGCCCGATTCGCACAAATCTTGCACCACTTTT
GTCCTCAGTATCGCGTCGGCGTGTGGTTCTGTCGTGGACTATTTTCTGTCTTTTGGGGCT
TTTCGGTTTGTGGGTCTACAACCGGTATCACTATTCGCTATCTGAGGAGGGGATTGGTGG
GGATTGACCTAGGCGGGGCGGAGGGAAGGCGGGGGCTCCTTGATGGCGATTAGCAGCGGA
GATGGCGCACGACTAGGGGTGCAGAGTGGCGTCCCGCATAGACCCGCCAAAGTACAGAAT
TAGTCTAAATTTGCCTAACAGCATCACAGCCTAGTTAGAACTAACCTTTTTTAATTTGTG
TACGGAACGGGACGGGTCGGGCGCCGCCTTGCATCCCTACGCACGACTAGTCCCCCCAGG
GAAGGAGAGATTGTAGGCAGGAGGCGTGCTCTACAGGGACGGCTGCAGGTAGGAGATCTG
TTGGCCTGGAGAGGAGCTCGATGGAGCTGCCCCTCGTGGTCTCCACCAGCAAGCTCCAGT
CGGTGGTAGTCACCGGAGCCGGTGGGCACAAGGTATTTTTATTCTCCCCCCTACTGTCCT
CGTGATGTACCTTTTTCTGTTCTACATGTGTCTGCCCTCCTTCGCGCTTGATTTCAGTTC
GTCGTGATTGTCACCGGTCATGGACGTTCATGGCTGGGGGTGGTTCAGTTCGCTGGGTTT
GGCAGGAAAGTTTGTCATAGCTTAGTGCAATCCTGGCGAGTTTTTTGAGTGGTTCATCGA
GAAAGGTTCTTGAATTTGTTGCAGACACCTCTCAGCACGTTTTCCCCAAATTTCCGTCAC
CAAGTCTGCCTCAACATTATCTTGGATGTAGATCTCCTTTTGTCTTGGATGTAGATTTCT
TTTTTTAGTCTGAGTTAATTGTCACTACAGTATGTTTATTGTAAGAATTTAGAGGCCCGA
GGAATGTTGCAAATGATCAGGGTTAGTTAACTGAATGATTGGTTTTTCCTCTGTAGGGGT
ACTATTGTGAAGAAACTATTGAGTATCATTTGTCAGCTTGATTTTGGTGGCTTATTTTAG
ATTAGTTATGGATTTTTTTTTTTGCTTAGAGTTGAGCGCTTACCTGAAGAATGTTTTGTG
GATCATCTGAAAGTAATGATATGCAATAATTAACAAGCCAGTAGATGGCCTGAATCTATT
TATATGCAATGAAATTTGTTCCAGATAACCCTCTGTTATTCTGCACTTTCCTTTTTTGAG
GGTTTCTTACCACCAACTATGCTATATATGTCGCACGCCTGCCTAAACTGACTGCCTCTG
GCTGCAAGCGAGTGATCACTGATATACCCATATGTGAACTCAGAGGGGATGTAGTCCTAA
ATTGAATTAAATTTAGTTTTTTTTTACAGATTTTTTTAAATGTAGTTCATGTTATGGTGT
TTTCCTCTCTGCGTTCTGTTTGATGTAGCATGGAGGAAGGAATATTTTTGAATCTTTTTT
TCTTAGTAAGTACTTTTTGCATCCTGAAAAACACGTGTATAATCTATGTGTTTATAAAAG
CCAGAGGCGGCATGTAACTCACAACTCATGTTTTTTGTAGTCATTTTTCTAAGCCATGTG
TGATGCTATCTAGTTTTTGGTACTTGATTATTTTAGTTTTCATGCATGTCCTCTAGATTA
TTCAGGTTCAGTAAATCTTTTTTCATTCTGGATATGGTTTAGTGTCGCTATGTTTTGCAT
TCAGGGTCAATCAAACATTAAAAAATTAGAGCCCTGTGATCTAGTTTCTCTGAATTTTGT
TTTTGTCCCTGCACATACCTGAAGACTCGACATGTACCACAAGACGGGCCGCCTCCATGG
ATCTCCTTGACAGTCATCAAACGACATATCATCCATTTTTTTGCCCAACTCAAAAGTTGT
TGTTTCTGCATCTCTAGGTCCTCCATTTGCACAGGTGAATTGTGTTGGTTGTCAACAAAG
CCATACATGTTGCCTAAATCTTGAAAAAAAGGAACATTGGAACCTATCAGATATCCTTCT
TTTCATCATTTCATCGTCTGTTTAAGTTTGACATTTTTTCTCTTTCCCCGTTTGTTTTTA
ATTTGTTACCACCCCCACCTCAAGTCTTGGTGTGTTGTTCAACGTGTAGTCATTTTCTAA
CACTTGAGCTGCCCCTGTTTTGCTGTAAATGTACAGAGGTTCACCCCGATCACTTGTTGG
ACCAATGTCAGTTCCATACGAGCATGTCTCTTGCCCCTGCACATGAGTTTGTACAAAGTT
CATCTCTTTTTAGCTTTATCTTTTTTTATCTTTTTTTTTTGGTTTTGTTTTATGTGCCGC
ACCTGGGTATTGATTCTCTGAGAGCCTCCATTCAGGTCAATGTATCCCTTCAACAGTGTC
ACATAAGAGAAGTTTGGCTGTTTCATCAACATATTTTTTTTCTGTTAGTTTCCACACAAC
TTGCAAGGCATAAAAATTACGAAGCAAGTTTTAACCCCTCCTTCAACCTGCATGAATACA
ACTTCTTGGCTTCCAATACACATATCTTCTATATCCTCATTCACACTGCTATTAAACTGT
AAAATTCAATGTTTTTCAGATACAGTATGAACTCAAGAACATATATTTTTGAGGAACAAG
CAGCAAGCATTAAACCAGCAGATATGCAAGCATTAGGTACATTCAGATATCAGTATCTTA
AGTTATTAGTTATCCTGCTACTCATTTCTTCAGTTTCAGTTTTTTAATTCATCATTAGTC
TTAGATTTTAAGTAGGTGTCGTTTTCAGTGTAATCACCTATCAGTTCTGTCAGGTTACAG
TAGGTGTCATTTTCAGGTCAGTTTCTTTAGTTATATACTCCCTCCGTCCCAAAATTCTTG
TCTTAGGTTTGTATAGAAATGAATGTATCTAAATACTAAAACATGACTAGATACATTCAT
ATCTACATAAATCCAAGACAAGAATTTTGGGATGGAGTGCGTATCATTTTAGTCTGACAT
TTAGTTCATTATGTCAGTTTTAGTTTCATTTTGTCCAGTAATCTCATTGATTACTCTTTA
TTTTTCAGTCCAGTTATTTCATTGATTAGTCTTTTTTTTTGTTTTTCGAGCAGGAGTTTG
TCTATGTGTTTATCATTTTCTCGTTCAATCATGTTAGATGTCATTTTGTCTGTCATTCTA
GTGTCTGAACCTGTAGGTGTCAAATTCAGTTTACAGTTTTTGTTTCAGTGTTAAGTGTCA
TTTTTTACTTTCGTCAGTTAATGTTCTTCATTTTTATGTTTTATTCATTTTTTTCAGTGC
CTTGCGTAGTATTCAGTTTTTTCATCTCAGAAGTGTCATAAAATGCTCAGCCATATTTCC
AGTCTATAGTTTTCAATTTCAGTCATCTTCATTGCAGGTTAGTTCATGGTTATGTTCAGT
GTCATTTTCAGTCTTATTCAGGTTTCAGTCATCTGCAGCTTTCTTCTGCTCCTCTTTTTT
TTTGGAAGATCCAGCATCGCTGGCATTCATTGATAATAGCAGGAAGCAACGGAAAACAAC
AAGGTGGTGAAGGTCCTAGGACCAGAAGATCCGAAGATCAAAGAAAAACAAAAAACAGCA
GCCCTAAAAGCTGCATCACAACACTCCATACAAACCAAACTAGACAGCGCAACTCCGACT
CCAATGGTGAACTACAAAGGAAACTAGGCAAGGTTGGCGTGACGGAGGATCACCGAACCA
ACCACCTGTCACGCGTCATCGTATACCACCGTCTCCCCACCATGGCTTTGACTTCGCAGC
AACAAACAGTCGAGGCACACCCACGGACACGCCGGAGAAGCAGAGCCGACTACCATGACC
AAGACCACACCTCTGACATTGCTCACCGCCGTCATCGTTGCCATAGGAGCCCCCGTACGC
GTCCAGTCGTAGGAAGCACCAGAGGTATCAAAGTCTTCAAGACGACGCCCTAAAGAGGGG
AACGACGTTGAAGACGACGCCATCGCCCGACCTTACAGCAGGATCTAGGCTTTCATCCGA
AGAAATTGATCCAGGAGCAAAGGCTGTGAAATTCCCGACGATGCCTCGAAGGAGGATAAA
CGGCGCCCGTGGGCGCCGTCACCACCGGCCAAGCTTTCACCTGGGGCAGCCACTCCCACG
CAGCAGGCCGAGGTCGACCCGTGCCTCCACCGGACTGCGCACCCCCCCGCACAGTAAGCA
CGCCAACGCTGTGCAGGGCCGCCAGCTAGCCTCCTCTACGACGAGCCTGCGGAGACCAGA
ACAGGTCCTGCACCCCGCATCAACCGCGGCCGGAGCCTCCATGCTCCACCAAACGACATT
TGGGCACCTTCAACCGCCTAGCCGTCACCATGTGCCGCCCCACGCCAGATCCGCATAGCC
CTCCGCTCGCCGCACTTCCCCGAGCCGGATCCGCCACCGACCGCTGCATCCGGCCACCAG
CTCGCCAGATCCAGCGCACCACCTCCAAGTGCGCTCGCTGCAGCAGCGAGCCGCTTGCGC
CCGCTCCGTCACACACCTCCCCTCCGCCTCGCGCTCCAGCGACTGCAGCAGATCCGCACA
ACCCCGCGTCGTCG