| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_49552
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_64947 |
1 |
640 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_64947
Contig Sequence (9136 bp)
>contig_49552 9136 assembly3_WGSMorex_rbca.fasta
GGGACGGACAACGAGATCAAGAACGTCTGGCACACACACCTCAAGAAGCGACTCCAGTCC
TCGTCCAAGCCGTCAGGCCAGGCAGCGCCTAAGCGCAAAGCCAAGAAGCCTGCTATGGCT
GCAGCGAGCACAGCCGATGGCTCGGCCTCCGTGCCAGTGTCGCCGGAGCAACCCATCTCG
TCGTCCGCCACCGATTACTCGATGGCATCGTCGTTGGAGAACACAGACAGCTTTACATCG
GAGGAGTTTCAGATTGAGGACAGCTTTTGGTCGGAGACACTTGCAATGACGGTGGACAAC
TCCGGTTCCCCGATGGACGCCGGCGTCACCTTGGGCGCCCAAGACAGTGCATCGCCCTCG
TCCAGCAACGACGAGGTGGACTTCTGGGTCAGACTGTTCATGCAGGCTGGCGAGGTGCAG
AGTTTGTCTCACATTTAGGCAGAGGATATCGGCTCGGCTAGTTTCTTGTTCATTTTATGT
CTCTCAATATTATTTAAAGTCTTTGGCATAGACTCTTTTGGTCCGAAATTACTTGTCCCA
CAAATTGACATCTAGATATATTCATTTTTATAAAAAGTATTTCCCGACAGAGTGCTTCGT
TCTGCTCATTTGGTGGGCGTGTGTGTATACCTGTAAAACGGAAGAACTTGTGAAGGGGGA
GAGAATCGTTCGTAGCGGTGTTCATCCAGCAAAAAATGTGTCACGGCACGAGTGTTGAAA
ACTTTTTCTATCTTGCATGCCAATAAGATTGGCGTCTAACTGATAAATGTGTCTTTGGTT
GTCGTGGGATGCTAACATTTTAAGACATTTCTAAACAATCCTCAATACTCCACTAAGTTT
TCGTAAGAGCTAGCTGATCCCGTATATCAAACACATGTCATGTGTCCCGTAACTATGATG
ACCAAGCGGGCGCGTTGTCAAGTTCGAACACCCACATCAATGCAGCGAGCACCACACCCT
CTCCTCCCTCCCTCCTCCCCAGTTCGCCGCTTTGCTTTGTTCTGCTCCCCAAGTAAGCAA
ATCCAAGTAGCAGAGGGAGCAAAGCTCTCCCGTCGGCCAGGATGCATGCCAAGACGGGCT
CGGAGGTGACGAGCCTAGCTCCCTCCCCCTAGCACGCTCCCCGCCGCACGCGGCCACCAA
CAACGTTGGTTCCCAGAGCGGGCATTTTTGCTAGGACACGCACACACGCACCCTAGTCCG
CCACGGGCCTGACCTGTCAAGCTCCCGGCGCGCGCACATACACGCGCCCGACCCGATCAA
TGAGTGCATGCACGCCCACCGCATCCAGTCGCGGCTTATTGACCCAACAATCACCCCTAA
GTCGCGTCTCACAGGAGTCCCGGCCCGCCGAAGTCGTCGCCGACGTCCACCGGCAACGCC
TGCTCCTCCGCCGGCTCCTTCCGCGGCTTGGGATAGTCACGCTTGAAGTGACCACGCTAC
TCGCATTTCTAGCAGCGGCCGCGGCGCTTGCCGCTCCTTCCCGATGTAGTGCTGCTACCC
CCGCTGTCGTCATGGAAGCCATCGCCGTCCCTCTGTCGCCCCGCGCGGCCCACTGCTCCT
CACTAAGCATCAGCTGCCCGTCGGCCCGTTCGCTGCCGGCCTGCGTGCGTTGCCGCGTCC
GCTCCTCGAATGCCTTCAGCCGCCCGAGCGCCTCCTCAAATACCATCGCCTCCACATCGC
AAAACTCATCGATGCCGGCCACCACGGTGTACAGCCGATCCGGCACGGTGTCCAACAGCT
TCTTCACCATGGCTGCATCATCGAGGGTCGCCTCGCGTACCTCGCCGCTATGCCGTAGAC
CTTCCAGGCGTACGCGTCGACGTCCATCCGCATGCGGTCGAATTCCCCGCGGAGCGTCGC
CGACCGTGCGGCCTTCACCCTATCGATGCCGACGAAGCGCACCTTGAGGGAGTCCCATAC
CTCCCTTGCAGTGAGCTTCGGCGCCACCTGCATCAGCAGGTCCTCCACCAACGCCGTGAG
GAGCATCGCCCGCGCCGTCTTGCACTTGCCGGCGTCCACCGCCGCTCCATCCACCGGTGC
CACCATGCCACACAGCCCCTTGGTTTTGAGGATAGCGTCCACCTTGATCGCCCAGGAGGT
GTACCCCGTCGGCGTCAATGGCGGAATCTAGATCGACCCCGATGCAGCGACGCCACCATA
CGGAACGAGTGACATGGCCGCCGGTGATCACCCCTCACCGAGGCTCTGATACCAAATGTA
AGGACAAAAATGGAACCGCCGCCGGACGGCGATCGTTGGAGACACGATCGGAAGGGAGGA
GGAAGAACACAAAGAGTTGTCGGTTCTCAAACACCCTGCCACGCGCACGACCTTTTTTCT
GTATTATCATGAGCACGTACTCAACAACCTGGACTCAATACACAAGAGGCGAGGGGGTTT
ATACGCGCGCACAGACGCGACACGCCGTTCTCATGACGCACCTTCCCTCCCACGATCTCC
ACGCCCCGCGCTCCGCAGCTCGCGCGCCTGGTGCGCACGCACGCGCCCCGCACGAGTGGG
TCCAGTGCCCTGACACGGTCACCCCTGTGCCAATTGCGCTAACTAACCCACGCACACATG
GATGCACACCCCCTAGGACACACACACACATGCACACCCTAGTCCGCCACGGGCCGGACC
CACCATGCTACCGACGCGCGCGCATACACACGTCTGACGCGACCAACGCACGTAAGCACG
CCCGCTGCATCCAACCACGACTTATTGACCCAACGTGCGGCGCGGTGTACTATGTGCAGA
GCCCGTCGCAGGACTCGCACGACGGGGAGACCACCACCAAGGGGGCACGTCCATGCACTC
CATTCACGCGCTTAGCCCCATGACATCCCAGCACCACTCACACTCCTCCTTCGGGTGCCA
CTCCTCCTTCACCCACTTCTCCTGTGGCGCCCACGACAAGGACAACTCTGGTAGGGGCGG
GAGGAAGGATGCGCCCGTCGGAAGGGGGTGGTAGGAGATCGAGGTCATCGAGGAGGAGGG
GCTACTCTATGAGTAGTACCATCATTGCCCCATGCCCAACCGCTCCAAGTATCGCCTCAT
CTTCGTCGGCAGCTTCACCATGCTCTTCACCTTCTTCGTGCTCGTGCTTTGTTGGTTCAT
GTCCATGAGTTATTTCTCTTGTTTGGTTGATGCACTTGGATCTGGAGCTCCTCACTGCGG
CTGGTCCCGGCGAGCACAGCGGCGACAACGAGCGGGTGTTCGGGGACAGGACGGCAGAAG
AGGGGCGGGGTTCGGGGAAGGGTGGCGGGTGGAGCGCAACATATTTTACTAAGACCGTTT
TGCTCGAGTATATTTAGGGAGATGAGAGGCACCGGAGTATAAATTTTACTCCACTGGGCC
GATTGGGGATCGGTTAGGTGCGCGTTACACAAGTAAAATCAATAGTTTATTCTTCTAACG
CCGGATAGGGGATCGGTTAGAAATTCCATTAGAAGTTATTGTTTGTCATCATGCATGGGT
GAAGTTGTAGATATGTGCTTTCCCCGGTGACCGGCAAAATCAGAGTCTCGGAGATGCCTT
ATCAAGAGAAAGTTTGGCCGTCCGTTTAGCTGAGTCGGCATGGTTTTGTTAAGTTGGTGG
TTGTCTATGTGAAGTCAACGCCACCAAGTCGCTCTTATGGCCGAAGGGTGGCCAAAATAT
TCCCTCCCAACCTTGTTGCACAACAGGACTCAGTGATGCTTCATGTTGGAGGCTGCGTTA
TGTCACCGTGGAGATCTCTCCGGACCAAGTGGTCCGCCTCGGCGCCGCCAACGATCCAAT
CCAACATGAAGCAGTTTGGACTTGATCGTGTTTTCCCGTATTTGTTTGGAGTCCTTTTCA
TAAGATTTGGGAGGGTAGTTTGTATTTCGGTATTTCCTTAGGGTCCTTGATGTAAGATGT
ACTGCCCAACTATCGAATTAATGTAGTGTTGGATCCTTCAGGAACCTTCTGATGTTAAAA
AAGGCACCAAGTTGGGGAACCAACTGATTTGCTTGCATCTACCCTTTCCGATGAGAGCCT
TCAAGACGATTAGTGTTTTCTTTCCTCTAGCCGGCGTCGCACCAATCTGCCTCAACATCT
ATGGCCTTGCAGTCATGGTGGCACGGTGGATCCTGACCTTTGACGACGAGAGTTGCTTTG
TGTTTTAGGTGTTTTCAAAGTTTGTTTGTGTTTCGTGTCCTTCTCGAGAAGACAAGGCGG
TTGCGGCTCCCTAAAGATGGACTATGGTTTTCCCAGCCTAAGTCATGTCCCGTCGGTGCG
CCTAGCATTGTCGAAGGACATGTGGAGGTGTGTCTCCTTTCTACACCTTGTCTCGGTGGT
GCGTTCAGCATCGTCGTGGGGCATGTGGAGGTGTGTCTACGACGAATCTACTGGAACTCG
ATCGATGTTTGTCTTCGAATGGATCCTCTTGAATCATGTCTTCGTTCATCTGTGTTCCTG
TGTCTACAGGTTGTACCCTTTCGATCTATACTTATTTTCATCAATGATGATTGTCCTTGG
GGGCGCTAGTCCTTTGAGGCTTTGGTACAACATCTCGATTGTTTTGTACAATAAAATTTG
TCTGGCTCCAATGATGAAGGTACGATGATAATGGTACGAATTTGTGTCATTTGTGTGTTT
GTACTCATCACTCAATGGTCTACGGATATGGATGATTTTTTATTACTTTCAATGTTCTTT
TTGTACTGGTGTTGTTTAATGAATAGATGGTAGTTTTTCTATTAAAGAAAAGTACCAAGA
CATGAACAACAAGTGATATAATCGAGTTTGTGTGTGTACTTAGCTCCACTAGAGGTGACT
TTTTTTCCAAATAAAAGTATAAAACATATACTTCACTCATAAGAAATAACTAAAAATCAT
TCATTAAGATCATTACAATTTCATTTAAATGATCCTTAAAGCATTCACAAGTGAGAGAAA
ATCTTGCTAGTCTAGCGAACTCATGAACAACTTTATTTGCATCTCTATTATAGTGTTTGA
CTCTAGTACTAATAAAATTAGACGCATAACGGAAACAATTATCAAAGATTTCCATCGCCG
CACCCGTCAATCGTCCTTCATCCTTACTGGTATCAATCACCTCCATATTATCTGAGTTAA
TAATGCATCGATTACATCCCGCCTTTTGCATCAATGTTAGACCGAATTTGGGAGCCAGGG
GTTTAGCCATCAAGTATCCGTGCTGGTAGACCACCATAATGAAAAGAGGGGGTTGGTCTT
GTCAATCTTCTCAATTTCTCTTGCAATAAATCTTCTTTTTTTGTCTCTAAGAACTGTCCC
CATGGTGCCATGAAGAAAATCATGGTCAAAAGAAGCGTCAATTTTCAACTTCATAAATCC
CCTCGGGTGACAAGACCAACCCCTTCTTTTCATAGATGCCTTTAGGGATGATGCATTAAC
AAAATTTCGGGTAAGGATAGAATTCCCACATATATGAGATGTGCATTCTGAATTGTCTCT
TTGCAGACCAATTTTTGTCTTTCCCACTATAGATATCATGCTGAAATCGCAATCATTTCA
TGCACATTGTGGTGTCCCATAATTGCAACCATTTAGTCTAGAGGCGACTTGTTTTAGGGT
GCTATGTTGTATGACCATCGGGTGGAAGTGTTGTAAGGGCATATGCAACATTAACCCGCA
AACCTCCCGTAACAGTTCGAACCGCGCTGTCCGGAACGTGGAAGCCATCCAATGCGATCC
GAGCGCGATTTCTCCCGCAAACCGAAGACAAATGTGAGGGGATTCGCGGGAGTCCAGACC
ACTTCCAAGCCCGTTTCTGACCACCCTGACCCATCCAAACCCTCCACCCACCCTTCCCGT
GTTTTTCATTCCACACGTCACGTCGCTTGTCGTACCACATTCATGTCGGCCGAGAGCATG
CACCTCCGGTCACTAAAGCTGCGATTTGACTCTACAGGAAGGCAGTGCAGATAGACACGA
CCTCTCGGGCGTCGCTGGTTCAATGCGGACACCGCGTCCCGATAAACTAATTCTAGCAGG
TGCGCCACATTGAAGCAGGCTGACCGGTCAACTCCATGGTCTGGTCGTGGTTATTTAAGT
CGTGCTTCGGTGTCGTCTAGAGCGCCGCACCGTCCTCATCCTCTTGCCGGGTCTTTCCTT
CTCTCCGACCTCTACATCCTCTCGTATTCCATCCAGTAGCTTTGTCGAAGTCCCGGTTCT
CCGCCCCGGCATACGGCACCAGTGGGAGCTCATAGTCTGGTAGATCATTGTGCCACCAAC
CTCGCTCACCAACAAGGAGGTGATAGTCATCTCCTCCGGCAATGAGGAGGAGAATCCGCA
GCAGAGGTCACATCTATTGTCGGAAGCGACGGTTACGGACAATGAATTCGACAAATGAAG
ATCATCATGGAGCATTCGCTTCGTCAGATAGGACCGACGCCACCATCACCGTTGCACGTG
AAGGAGGAGACATCGTCCCTGCCGCGGGTCCCCATCAAACACGATTCAGCATCGTCGCTC
TCGTAGATGAAGGAAGAGTCGGCGTCCCCTCCGCCCAACCGCGGCCTCCACATCAATGGC
CATGTGAAGCATGATCCCACGACAACAGCGCCTCCGCCTTGTGAAGCCGGTGTCGACATC
ATCTCCGGCACAACAAGTACGCACGGATTGACATGGCATCATCGCCACCTCGACGCCAAC
ACACCAGGATAAAGGAGGAGGTGTCGCCCAAGATCGCCAAGGCGCGTGAGAGCATCCTTC
ACTACCTAGGAGACGAAGGTTTCGGCGGTGCCTTCGGCTCTCGGGTCGTGGTGTCCGTGG
CCTAACGCACGACTCGGCAACAGGCGAGGTATGACCGACGCAATGTCGGTCGGTGCTCCG
TGTTGCCAAGACGGACGTGGCACTGGAATGGGTCCGCAATGATCCAGACCTCGCCGCAGC
ATGGGTGATCGACCGTTCTGTGACCACCGCGGAGACGACCACCAAGCGTCCTAGACGCCT
TGATGGTGAGCTCGCCAAGATCGACGAGGAGTGGTCGCTTAGCGACTACACTGCCAACGC
ATGTCACCGCAAGGTCACCGCGAGGGCTCCAAAGGGCATGTCGGTAGTGGCCGCGGGGCA
GGAGGCAGAGCGACTCCTCTGTGATCGGCACGCACCCGCCGGACAACACTGTCATGGCCT
TTCGGCCCCATTCTGCCGCTGGAGGGACCACAACGACGTCGACACTCTTGAAGACATCGG
TGCGGCAAGGACAGAGCGACCACACGTACGAGGTGGTCGTGTGGTATAGGGTTTAGGTTC
TTTTCCTAGTTTTTTAGTTAAACGGTTGAAATACCGATGTTTTTTTATATATAAATCATA
TCCGAATTTGAATGAAATTCGATCGGTTTCATTGAATTTCATCTGGTTGGTTTGAATTAT
TGGCCGGATGTATGCGGCTAACGTCGGATGTCGTCCTTCCGCATGCGTGTCCGCAAACTG
GTCCTCCTGTCCACGGATGGATGCAGAAGAAAATTTGCGGATTGCTGTTGAAGATGCTTG
AACTGTGTTTTTTTATGACATCAAACACTACGCTAATTCTATAAGATTCAAGTGAACATG
CCATCTAAATCTTGTATTTTTTCTATTCATGCGTTTTAAAAATCCTACAACCAAAGAAGG
TCTAAAATGAAAAAGGATAGGAATGTATATATCCTCCAATAAAAGGACAAGTGTATACTT
TAAATTTTCTTGCCCTACATGTTTTAAAACTTGTGGCAAATGATTGCGTACACTAATTAA
ACGGCCCGACACGCAACCGTGAATATGTATCTTTCGAGCTGTCGTTCATCAATAGATTGC
ACATACATGATTACCAGTTAGTCATCACCTACATCGTGCTTTTGGCTAATTTCATAGACA
AAATATGCACGGATGCAGCGTTTAGTGATCATTCCCAAAGGAGGAGCAGGTATACGCACG
GCAGCCGTCAACGGACTCAAATTAAGCCGCCCCAGTGGGCAGCTCGCGGCCAAGTGACAG
TTGCCAACTTGCGGTGGTAAGCCAACACGCAGCGTGGCAACGGTACAGCTTGCGCCTTGG
CTCGCTCGCAACAGCGCACTGCCTGCTGGCTTTCATAAGGGCATCTTCAACAACAAAGCG
TTAAGGGGGCTGCTACGCGTTCAACGGCGAATGTTAAGTAAACATTCGTCATCTTAAGGA
CCGTTCGATGTACGCGGGCAGCCGTCCGATCTACGTTGTTCGGTCGCCTCCCCGCATCCA
ATAATTTCTGAAACAAAGGTCGAGTTACAGAAGCAACAACCATATTGCAGAAACAACAGT
CGTCTTGTAAAAATAATTCCTAAAACAACAATCGCGCTGTAAAAAGAATTACGCAACTTT
AGAAACAACGGTTACGTTGCAAAACAACGACCGCGTTGTAAAAAACTGAAGAGGTGTAAA
TGGAGAGGGATAGGTAGGAGAGGGGATCCAAAAATCCAACCGGATCTCGTGAAACAACGG
TTGTATTGCAGAAACAACGACCGCGTTGTAGAAAACTGAGGAGGGGTAGATGCAGAGGGA
GAGGTAGGAGACCGGATCCAAATATCCAACCTGGAGGCACTCGAACTCCTTCCACCGGCG
GTCTTCTCAGCAACGGCGGAGGCGCACCTCGCCCCGGCCAGCCCGCCCCTCCTGGCCTCC
CACCAGACCCTCTCTGGCGCCGGCGGGCCTCCTGGTGGCGCGAGCGCTGCCCGCAACAGC
CCCCGCGAGGGGCTCGGTCGCAGCGCCGCCATCGACAACGGGACCAGGGGTCTTGTTCAG
CGCGGGCGCCATGAGAGTGATAACAACACGGGCCAACACTGCTTTAGGAAAAAAGAACGG
TTGAGGAAGAGATAAGATAAGGACACGCGTCAAGCATTTGAGGTAGTGGATGCCCATCGT
TGGATCCGTCGGTTGTTGTACAACGTTTCCCTTAAATTAAACAGATGTCCAACAAATTTT
TGATCAAAAAATAACGTCGTCCCACACATATTGCCCTTTCATCTTCGGAAATTGGGATGC
GACATATGGTCCCTCGTCCTGCAAGGGACGGTGGGCCGAAGATCAGGCTGCCGGCGTACC
GCGTCGGACGTAGCGCATGGTTGACGTCCTCGCTTTATCAATGCAGAGCATCCGACGCGT
AGACGGCATCATGGCC
