morexGenes - Barley RNA-seq Database

Contig contig_49368
Source Contig contig_49368
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_49368 (7317 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_49368

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_64823	1	1576 bp	AK364348	Available	Available	None
CDS Structure of MLOC_64823

Contig Sequence (7317 bp)

>contig_49368 7317 assembly3_WGSMorex_rbca.fasta
CTTCAAAGTTCAAGTGGATGACTAGAACAAATAATTTGAGAGCAAGTAATAATACATGAG
GAATCAATCAATAATAAATTTTGGGACTATGCCCTTAGTAAGCCATTCACCATGGTGTAG
CGAGGTTTCGATAGTGGATCATTTGCTAGTTGTTGCAGTAGCTCTTGAGCCTTGTTATCC
TAAATGTAACTGTCAGAGATCTCGTGCAACCAAGAAGGTTGTGCTAAGTAAACAGTTAAT
AGTTGGGAAGATGCATGAGGTCTTCTCGAAAGGGCATCAACAGCTGAGTTTTCAGCCCTT
TTTTTTGTAGATGATCTTGTAACTGAGCACCAACAACTTAGTAAACACTTTGTGTTGCCA
AGGTGTATGCAATCTCTGGTCAGAAAGATGGATGAGGCTTTTCTGATCTGTCTTAATGGT
GAACTCTTGGAACTGTAGATAAGATCTCCATTGTTCAACTGCCAACAGAATGGCTAAGTA
TTCCTTATCATACATAGATAGTCCTCTATTTTTTGGCCCAAGAGCCTTGCTGACAAAGGC
TAAGGGGTGTCCATTTTGCATCAGGACGGCACTAGTGCCAATGTCACAAGCATCGGTCTC
AACAACAAAGAGCAGGGCAAAATCAGGTAAGGCTAGTACATGTGCTTGGACTAGAGCTTG
CTTGAGAGCATTGTTAAGGAAGTTGTTAACTGGTAGCTGCTCGGTTGGCTAGCGAGTAGG
GGATTAATGGGCTAATCNNNAAGTTAATCGGCCATTTAATCAATTAATCGGACGATTTTT
CGGTTTATCAGCTACTCTGTGACCCTATGAGTAGGGATTAATCGGCAANNNNNNNGGTTA
ATCGGATGAATTCTTGAACATGGCTTGAGAGTAGTGAAGGCAGTCTCAGTATCTGGAGTC
CAAGCAAACATAGTAACTTCCTTCAGGAGTTCAGTCAAGGGTCTGCTGATCATGCCATAA
TGCTTAATGAACTTCCTATAGTAACCAATGAGCCCTAAAAATCCTCAGATCTGCTTCACA
TTTGTAGGTGTAGGCCACTGTTGGACAGCCAAGATTTTAGATGGATCAGTGGGAACCCCC
TTGTCACTAATGATGTGGCCTAGATAGGAGACTTGCTGTTGATAAAAAGCACACTTGCTA
AGCTTCACCTTCCACTGCTTCTCCTCTAGAGTGCTAAGTACTTTATCAACATGAACCAAG
TGTTCTTTTAGGGTCTTGCTGAAAACTAAGATGTCATCAAAAAAGACTAGCACAAACTCT
CTCAAGGCAGGCAAATCAGTATTCATTGCTCCTTGAAATGTACCAGGAGCACCAGATAAT
CCAAAGCCCATAACCAGAAACTCATAGTGGCCTCCATGAGTTTGGAATACAGTTTTAAAC
TCTTCTCCAGGAGCAAGCCTAATCTAGTGATACCCTGCTCTCAAGTCCAATTTAGTGAAC
CAACAAGCACCCTGTAACTCATCCAATAGTTCATCTATTACAGGAATAGGGTATTTACTC
TTCATTACGATGGCATTCAAATGTCTGTAGTCAATTACCATATGCCAAGTACCATCTTTT
TTCTTAACCATAAGGACAGGTGAAGAAAAGGGGTTGTGGCTCAATCTAATCATACCATTC
TTTAACAGGTCTTGAACTTGCTTTTCCATTCCAGTCTTTAGATGAGGAGCTACTCTATAT
GGTATGATAGCCACACGTATAGCACCTGGAACCAAGGGTATAGTGTGATCAAACACAACA
TCAAATTTGTCTAACAGTGCTTGCACTTCTGGGATATGGTTAGGAGACTCTGCATAGCTG
GACAATTCTATGCTCATAACTGTGAAAGCACATTGATCAGGTAGTTCACCTTGTAATGTA
ACCACCTTCTGCTGATCTTGAAAAGAGCACCATTTCTGTTCCCAGTCAATGACCATAGGA
CTATGACTAGCCAGCCAATCCAATCCTAAAAGCCCATCATAAGTGTCGAGCTGAAAGAGT
CTGAAATATGTCTGGAATTTATTATCCTCACATTCCCAATCACATTGTTGCACAACCTGA
GAACACAACAAGTGAGCATCACGAGCAACTGTCATTTCAATTGGGTTAATATTTTTGATC
CCTTGAAGGACATGAACTAAGGCACAGTTGATGAAGGAGTGAGTACTACCAGAGTCAACC
AAGAATATGAGTGATTACCCTTGCACAACAACTCCTAGCTTCAGTGTTAGAGGATGTGAT
TCAGTAGAAACTGACGCAGCTCACATCATCATCAAGTTATTAGAATCACTGTCTGAACAC
TCTTGAGAAGTTTGTTCATGACTCTGTATGTGCTCTATCATTTCCCGCACAATGTGAAGC
TGAACTGAAGCCTTGCATTGATAATCTTTAGACCACTTTTCCCCACAAGTGAAACAAAGT
CCTTTAAATCTCCTGTAAGAACGCAGATCACTCCACTTGTCCTCAGATGGAATAGGTTTA
GTAACTTCAAAATTCCTTTTATCAGTGCCCATTTGAGTACAAGGCACGGAACTGGTCGTT
GATGGAGGCTTCTTAGCAGGTAAACCCACTAAAATGTTGTCACTCAATTCCTCATGGAGC
AAGGCCAAATCATAAGCAGTATCCAGGTCATGTGGTTTCTGTAGAGCTACTCACATGCAC
ACCCCTGGCCTCAACCCATCAATGAACCTGGTGGTGTAATACAAACTGTGAGGCATCTCT
TTATAGGCAGAGAGTTGATCATACAATTCGGCAAACCGTTCCACATAATCAGCCACAATT
GATTCGTGAGTAATGCGGAACATCTGCCTAACCAGAGTCTGATGCTGGTTCCGGCCAAAC
CTCTGCATCAACAGTTGATAGAATTCTGGACAGAGCAGATTTGGTGAACGGTGTTGCACT
GCTTCCAACCAACGCGCTACCGCACCTTTAAATTGAGACGTAGTGAAGGGAATCCTCCTC
GATGCAGGAGTGCCCCAAAGCTTGAAATATTCCTTGCAGCGAGATTGCGAGAGATGCAAG
TTCGCGCCTTCGAAACGAGACAGTTCCACGCGAGGCACGGGTTGGTAGGTGTCAGATACT
TCAATAACATCATGCTCGCAAGGCAAAAAAATTCACGGGGAGAGTCACAATCACGCGCAC
CTTTGACCGGAGGAAGCACATAAACGTGATGCGCCTTCCCCCTGTGGAACTTGTCGAAGC
CAAGGGGATCCGTCATGGGAGCTTCACAACCGTCCCCAACATCCTTCCACATCGATAAGC
TCGCCCTCTTTCCTGCGGATTCGTCCTTGCCGCAGCGTTCGAGCTCCGATCGGATGTGCT
CCACATCGTGGCTGACCTCGGTCCTGGCGCCGTCGATCCGCGTGGAGATGAGGCCGCCGA
GAGCCGCGGTGGTGTATGATCTTGTCGCCGTGAGCCTTGAACTTGTGGTCGAGGGACTCC
GCGAAGTCTGCTCGAAGAAGCTCCTGGATATGCCGCCCCTCGGAGGACAGCTTGTCCATG
GCGTCCCGCCACTGCTGGAGCCTGAATCGCATGGCGTAGACGTGGTGTGGGATCTCCAGA
ATCAAAAGGCTCTAAATACCAGATGTGAGAAACTGGATATGATCTGATCAGAGGAACTAG
CTAAGATCTAGATTCAACTGGAATTCAAATTACAGCAATCGCCCATCCACCCATACAGCT
AGCTACCACTACCACACACACGCATCGCGCCTGACCGAAGCCATCCGTCCATCGCCACCC
AGTCATCCGCTACGCGTCGGCTTAAAACGCTCGAACTGTTACACCCGCCTTAACGGGCCC
AGTATGGGCTTGCAAGCCACTAGGGTAATTCGTGATCGCGAGTGGGCTTGTCCGATAGCC
CACGAGCAAGCTGGTTATTTTCTCGTTCCTCCTCTATTTCTTGAGTGAGTTCGACAGTTG
CATCAGGAGCGCCGACACAATATCTCAATGTTTGAATGATTGCGTAGGCGATTCGGCGGC
AACAATCTGGTATATTGATCTCTCACATGGCTCTCGTCTCATCCTTCTCATATCGGGGAT
GGAGGAGAAAAAGGTCGGCGGGTAAAGTATGATAAAAATAAGCCTCAAATGTGCTGGTTA
CATATTGCTGATGATCGATTTAAAAAGGGAAAAGATTTCCGTCAGCCGAGTGAAAACAAG
AAATGTCATCCCCCTTGCTCTTCCGCCACGTGGCTTTGCGAACCGAGGCACCGCACACAC
CGCTTCCCCATCCCTCCTCTCTCTCCATCTTATCTTTTCCAACAGTTTCTGCAACCCGTT
CATTGTTTCGAGAATTTGTATCTGCAAACACGGCCACTGTTGCAGAAAAGAGGAAGGAAA
AAAATTCAGTAACAAAGCGATTGTTTCTGAAACTCGACCTTTGTTTTAGAAATTAATGGG
TCGAAAATTTATTTTTTGAAACAAAGCGATTGTTTCTGCAACACGGCCACTGTTGCACAA
AGAGGAAGGATTTTTTTTTGCAACAAAGCGATTGTTTCAGAAACTCGAGCGTTGTCTCAG
GAATTACCGGGTGCCTAGTCAAAGTGCGGCAAAGAAAAAAAACTACAATAAGGCGATTGT
TTCAGAAACTCGATCGTTGTCTCAGGAATTACCGGGTGCCCAGCCGAAACGTCCGTGAAG
AAAAAAACTGCAACAAAGCGATTGTTTCAGAAACTCAAGCGTCGTTTCAAGAATTACTGA
ATGCCTGGCTCAAGTCCCGCGTGCAAATCGGATGGATGGAGATAATCAAACGGCTGTGAA
GGTGACGGATCATTNNAAATAATCCGTCGGTGGACGCGTAGCGTTGCCCATTTAAAAAGG
TAAAAACAGGCACAAAATTCATTAAATGTGGTAAACTGATGAAATTCTTACCCGCAAAAA
AAAAACTGATGAAATTCTAATTAATAAATGGGGTAGTTGGTGTCCCATGTGTTAAACTAC
GCGTACAGGTACCCCACAAAAAAACTTACGCGTACGCGTAAATAGTGAAATTGACTTGCT
ATTGTGCCAAGATTATTTCAGCCTTTTCCCGAAAAGAAAGAGATTATTCTAGCTTTAGTG
AAGTCTGATTCTAGCTTCATGTGGCGCGGCACCAGCTTTGCGACCAAGTGTTAAGTTCCG
TGGGAGCCAAGCTGCATGATCTTTAGAAAGTGAAGGTTCCGTGAGTGGCACGAATGCATA
ATGCACTAACTCGCATCGCTTGAGTGTATTAAACCGTCAGCAGCTCTTTTGATGGTGCTC
ACTGACTCAGTTTCATCAGACCCATTCGTGTCTCGGGTGTTCATTCCCGTCAAGAAGTGC
ATCCGAGTTCCGGGTCAATGGCTGGCCGCCGCCGACGACAGCGCAGCAGCAACAAGCTCA
AGCTCAAGACAGCGTCGAGGAGCGACATCCCGTCAGGGCCGACGGGCGTCCACCAAATCC
CCGACCACCTCCTCGAGCTCGTGCTCCTCCGCGTCGGCTCTTCCGTCGCCCTTGTCCGTG
CCGCCTTCACCTGCAAGCGCTGGCGCCGCCTCGTCGCGGACACGGCGTTCCTGGCCCGGT
TCCGGTCCCTCCACCCAGCCCACGTCCCCGGTCACTACCACGTCGTCGACCGGCCCTACC
GCGAGAAGCCGCGGCCAGACGGGAAGAATCAGGTGTTCGTGCCGGACCCCTTGAGCTCGA
CTGCCGATGCCATCGACGGACGCCACTTCTCCCTCGATTTCCTCCCGGAATGCGATGCCT
CCTCGGCCTGGGAGCTCGCCGACAGCCGCGGCAGCCTCCTCCTACTTTACAAGACGAGAT
CAGACTGGACGAGGCAGCTTCGCTTCCCGGACCTCCTCGTCTGCGAGCCGCTCTCGCGGC
GGTGCCAGGGGATCGCCTACCCGCCGGCGATGCGCCTCCACCTGTGCTTCGGCGCGTTCC
TGCTCGACGGCGGCGCCGTCGACGACACGGGTGGCTGCATCGGGATGTCAAACTTCCGGG
TGATCGTGGCGGTCTACGAGGACGTCGCGCATTCCCGCGGTGCACCCCGGGCCTGCGTGT
TCTCCTCGGGCGCCGACGGCGGTTGGAGCTTGGGGCAGCGCGCGGCCGGCGTCCCCCTCT
CGGGATTTGGCTTAATCACTTACGTAGGGCGCACGCGCTGGTCGCGCTACTGGAAAATGG
AGCGCGGCGGCGTCGTGCTTTCTCTCGACGAGGCCACCGCGGAGTTCTCGCTCGTCATGT
TCCCGGATACCGTCGTCGGGTGGCGGGACGAGTTTTCAACCTTTTGGGTCATCGGCGGGG
AAGACGGCGCGGTGCGTGTCGTCCGGATGATCAACAGAGACCTCACGGTCTTTGCGCAGC
TCCAGGGCAGCGGCGAGTGGGTGACGGAGAAGGTCGTGAGGCTGCGGCCGGCCGACATTG
TCGCGGCCAATGAGAGGTACATCCTCTTGACGCCGAGGGGGGAGACCTGCCTTTTTTCTG
TCGAGCTCGACACGCTGCAGGCGGAGAGTACGCACGAGAGGAACAGGTACGCGGGACCGG
CGTACCCGTACGAGCTGCCATGGCCACCGGCCTTGCAGGCCTGCTGTGCTGCAGATGACC
GGCGCCCAAGGAGATGCCGCTGATGTATATTATGGAATTTGTATGGAGGGTTCATATATA
CACCCTATATGTTAATAACAATAATAATTTAATAAAAAATTAGAACAATAATAAAAAATT
AGAAAAATATTTTTTAACTGTTTTGATTTATTATTTAATTATTAAAAAAAAATCCCGAGG
TGTATAGAACCAAAAACCAAAGTATATTTTCTAATTTATAGCTGTATATGTAGTACTGTA
CTTTATCGGTTTGGCAGGAAAGCAGCTAGTTGAGTATTTTGTTTTTGTCTCATTCTCTTC
TGTCACCCGTCGGATGTTGCTGCAGCGATTCACTTTCTCTTTGAGCCGACGAACGTTGGA
ACGGTGTGCTGGCGATCGTTTTACTATTTTTGCTTGCAGCCCGTTTAGATTTGTTTTTCT
CACGGCCCGTCGCAAAGGTGAGATGACGGTACATTCCCTAATAGCGTGTTTGGTAATACG
AGGGAAAGGGAATGGGAATTTTTAAGGGGGAATTGACTGAGGGATTATACATGGGAAGTG
GACTGTTACTCCCAATCCCACGTTTGGTGCAGGGTAGGAATTGTTTGTAGGAATTTGTTA
GAAAATAAATTTTCTTTGTTTGGTTCAGGGGTGTTGGAATGGGAGTTGTTAATGATAAGG
TTTAGTAGCTACATAATATGAATTGATTAAGGCCAAGTAAAAAATGATGGGCAGTATACA
AAGTCAACAAACTGGATACAAACACCATTTGAGAGTGAGGCAATGTAAAATAAATTG