Contig Data
morexGenes
Links



Map Locations of contig_49305 (6218 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_49305

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64773 3 1225 bp None Available Available None
MLOC_64774 2 3207 bp MLOC_64774.1 Available Available LOC_Os12g03090.1, FRAME:-3, EVALUE:1e-86, 13112.m00263 protein ribosomal protein, putative, expressed





CDS Structure of MLOC_64773






CDS Structure of MLOC_64774






Contig Sequence (6218 bp)

>contig_49305 6218 assembly3_WGSMorex_rbca.fasta
CTTCACAAGTCCATTGCCACCAACTTCAAGCATGATCTTTTCCTGATAATCCACTTGAAC
TTGCATACTGCAATCTTCCATGGGTTGAAGGAGATCTTCCTCTTGACGGAAGCCCATGGA
AACACACCTAAACCCACATACAACTCTCACGAAGACCATAGTACACAAAGCGTAATGGAA
AATGCTTATCATACCATGGGATCACTTGATGCCTCTCGGTACATCTTGTACGTTTTGTGT
GTTGATCAACTTGATTCACTCTTTGACTTAGTCTTAATCAACCTTGTGTCTCTATGACCA
ATCTTTGAATAAAACCTTGAATACCANNTTGGTCATCATATAAACCCCTTGAAACCAATA
GATGGAGTTCAAGAAGTGTTTATGGACAAATCCTTCGAATATAACTCAAGGGAGTCATTA
GTCCATAGGATTTGTCATCAATTACCAAAACCACATATGGAGAAATATACTCTAACAATG
TTGTTTGTTCCATAAGCATATCTAATTTTGTGGCTTGATTCCAGTGCTCTTGAATCCATT
GATGTATAGGAAGTATATCTTTGGAAATATTTAGATGTAGTGGTGTCATTCTAAAACATT
CCAAATTATAGGAATACCTATTGCGTAGTCACATTCTTCATGGAGATTGCTAGAATATGT
GTATGCCAGGTGAACATTTTTCATGTATTTGCAACTACATAGCTAGGATAGGATATCGTA
TTTTGAGCATGAGACTAGACAGCCTAGATATTTGTGTTGTTCCCCATGAAATTGATAATG
TTCAATTTGTTGCAACTGAAGCTTATCACAACATAATTGCTTCTCTTCTACTGATAATTG
CTTTTGAGTTTTATTAGTTTTAAATTTTATTCCTTGTGTGTTAGCACAATTATGTCATTG
GCGTTCCTCTCATAGACAAGTAAAACACTTCACTATATTAAGCTATCGGTGTAAATGGAC
ATAAATTAAATGGAGATAAGGAACGACAACATGTTAGCAGAAGTTATATACACACTTGTA
TGTTACAACATGTTAGCAGAAGTTATATACACACTTGTATGTTACTTGCACACTTATTGA
GTACTAACATTAGTCTACAATTTTCCATATGCTCTTTATCCAAATAACTTGTTATTCTTT
CTTTGAAATGTTGGTTGTGTTCAACTTACTTTGTGAATAGAAATTAGTAGCAAATTAGCA
CCAACATTACTTGCACTAAAATTGACATGTATGTATATGCATGATGAAGGCATTTTTTTC
TTTGTATTCATCACTACTTGATGTTGCTTCCTGCTATGTAGGAATAAGAAAAATAGATGT
TTCGGCTCATTTTGTATATTACTCTCCATTATAAGGCTTCCCGGATTTCATTTTGTATAT
TACTCTCCATTATAAGGCTTCCCGGATTTGCGACGTCAAGGTATAAATTTTCCACAAAAG
AAAGAAAAACATAATGACACTTCTTGTCTGATTGTGCCGAATGTTCAAAGTTGGATGCAA
AGTTGGATGCCTGGACAAACTATTCGACAGAATGTCGGCCGCCAACGATGGTGACTACAT
GCACTATTCGACGAAATGTCGGCCGCCAACCATGGTGACTACATGCAAAACATGATCTTC
GAGGGTGGTGCGCAGGCTCCATCCTTTTTGTGTGCTGACATGTGTGCCCACCAGCTGGCT
AATGCACCAGCATGAACTGTGGTGCTATGCATTGTAGGCCGACGCTGGTACTCTGTTGGC
ATGAAACATGGCCGCTGGCATGATCAGCCGCAGCCGCAAGCTCTTTTTTTATATGTTGAT
TGAAGACATGAAATGGGTCAGCGCGTCTAAAACAAGGACATGTCCGTTTGGGTCTGCCCT
TTGGAGTTGGAGTTGTTCTAACACCAACCTAAATCTAAAACAGGACGGACTCAGACAAAT
TCACCATCCGTTTGGGTCTGCCCTTTGGAGTTGGAGTTGCTCTAACACGGCAACAATCAG
CCCCGGCAGAAATGGGAGGGGTGGGCAACAGCCATGGCCAATCTCGATTATGAGGATGTT
TCTTCCTTGTGTTTTGCTGGGAAATAACAGTTGTGAGGAGGTTTCATGTAAGACAAGCAG
TGGATCCAGAAAATGCCAGTGGACGCAATGCAGTGGAAATACAAAGAATACACAAAACGG
TGAGCACATTGTATAATTATTTTATTATGGAAAATATGAAAAGTGGAGTATTCTTACAAT
AAGACTTGCAACTTCCATCTATCTTATCCTTAAGGTTAGTAAATCTTATTAATAAAAGCA
TTAAGACTTTCATTCTAGAAATTTTTCAAAAATCCAAAAAGCTTTTTTCCATTTATCCAT
TTTAATTTCAACATTACATAGAAACCCTTTTGGATTTGTTTCTATTGTATTGAAAGAATT
TTCAAAATTTAAACGAAATTAATTAGAAAATTTAGTTCTCTATCTATAATTGCAAGTTGT
CAATGGACACAATTATGAGCCCACTGTAACATCAAACACAAGGACATAACTTCCCACATA
GAGGGCCAGAGAGTTTTGTTACAATTTTACTGTTCACCTCTTAAACTAACCCTGATACAA
GTGCTTAACTAAAAACAACACCAAAACAACAATGAATCATAATAACTGGATACAATCATA
ACATTAGCATCAATGTTGATTGCAACATGCAGGGTCATTAACAATTCCGAAATTAAGGAG
ATGTTTGCAGTGGAAATACACATAGATAAAGGAACATAATATCAGAAACTGTAAGATCAA
AATATCAGGGGCATAATAAACTGTGAAGACAGCAGCAGCCCAAGAGGTCATGTTGGCTCA
CCTACTACAGAAATATCATCGGAAATGAAAGAATAATGTCAAGATGATTGATAAATAATA
TTCCAATATAATTGCAACGCAACTACAAGACATGTTTGGCATATCATACCACAGTTTCTC
TCTATAAAGCTGTTCTATCTATTCAACTAAGTATCAAGTTCAAAAAGTTGGAAACAAATT
ATTAAGCTCAAACAAAACACTCACTTTCATCAGCAACATCAGATTATCATAACAGAAAAC
CTTCAACTAGGCTGGATATTGAAGACAACCAAAGTGCTTAGATATCATCATATCCAATTC
ATTGTCCAAAATATGAGAAAACTACTAGCGGTAAAAGGTAGATAGATAGGCATGCAAGTA
GTACACCACCGCCGCCATACCAAACAAGAGATCTCGCCGGAGCTCAACGGTAGGACTTCT
GGAAACGCGCGCGGGCACCGCGACCACCGAACTTCTTCGGCTCGCAGCGGCGCGGGTCGG
CGACGAGGAGCGTGCGGTCGTAGCGGCCGAAGATCTCCTTCACCTCCTTCTTGGCGGCCT
CGTCGACGTACTTCTGGTAGTAGGCGACGAGGGACTTAGCGATGGCCTGACGGATGGAGT
AGATCTGGCTGGTCTTCCCGCCGCCGCGGACGCGAATTCTCATGTCTATGTCCTTGAAGC
GGGACCTGCCGGCGAGCAGGATCGGCTCGAAGGCCTTGAGGCGGAGCATCTCGGGGCGGA
TGAGCTCGATCGGCGCGCCGTTGACCTTGATGAGGCCGCGCCCGGGCTTGCAGTAGGCCA
CGGCGACGGCGGTCTTCTTCCGGCCGAAGCACTGGACGGTGCCCGGCGTCGGGCGGGTGA
GAACGGCTGCCATGGTGGCTGCGGCGGGCGCTTGGCTGCGGTGAGCGCGGTGGCGCGGGC
TAGGGTTTTGGGTGGCGGCGCGTAGAGGGGATCACGGCGGCGAGAGAACGATTATATAGC
CTGGAGGCGTTAGGGTTTTGGCCTCGCTCGCCCAGCGCTTCCTATGACATGTGGACCAGG
CTTAAAGGTAATGGGTCGGGCTGATCAGTTGGACCTTTTGTGGGCCTCCAAGTGCTGGGC
TTTCTGTGTGGGCTATTGGGGTGGGTTGTCGTCCATAAGAGGGCGCGGTCGGAGGAGAAG
GAAGCTAGGGTTTCAACCCGAACACTACTTGATCTTATCCGAGCGAGCCGTCCGGCGGCG
CCGCGGCGGCCGGAGTCGACTCTTCCATCGGCCGCGCCGCCACCGCGGTCCCCCAAGCGC
TTGCGGGAAGGTGGCGCGCGACGTTTGGACTGAAAAGACGCGGCATCCGCGGCAGCAGCC
GGCGACGAGCGATGACGACTGCCTGCGGTCGGAGCGCTCGCGATGATGGCCGCGCGGGCT
CACCCAACATACAAAACAATCTCCATTGCTTCCTTGCTTTCAACAGAGTTTCTCTTTCTT
TTGATCTCGGAAAGGTTTTCATCTTGTTTTTTCTTTGGATCGATTTCTTTTTGTTCGTTT
CTCTTGTGCTTGCTACTCCGTATTTGTATTCCTGAGCAAATTATAATCGGTTTCTTGGGT
TCTAACCAAGTTTTTTCTCATAAGATATTTTTATTATCTTTTTTTTCTTGGTTCAGTGCA
ATCCTTTTCTTGTTGGAGTGCATAAAGTATGCTTCTTTCTTGGAAGTAACTATTACTGTA
GAAAGTAATCTGCTGTTATGGATGTTGATTTCCTGAAATTTGACAGAATTCAGATTATTA
TTCTGCAGGTTGAGCCTTCGGTTGCTGTCATCGAAGCGGGAAGGTGGTGGTTTTCATGCC
CGAAGACGGATGCCCGACGACTATAGCTTTGTAATACGGATTTCGTTAGGAGATGCGGGC
TGTTGCTGTTCTTTCTTGGATTCGTTGATGAGTGTCATCCAGATTCAGTCTGTTAGTAGA
GGATTCTGGTGTAATACTGTTAATTGTATTTGTATATCAGTCAAGGTTTAGGGTCAACTT
ACGAGTTGACAAGTCGTTTTGAGGTTCAGACTCGAATTCTAATCGTGACTAATCAAACAC
TAGTCGACATTAAATTGTAGTCAGTCGGCCCTAGAGTTAGTACTCATGGACTGTCTTAAC
TTATAATCCATGGTCTCGGTGCTCCGTGAGATGCCGTTGTGATATGATCTGTGAGGTGGC
TGTATACTTAAATCTCAGCTTAACATTGTCAAATACAGTATGTAATGTTAATTATCTGTT
CATTTACTCTGTTCATTCCATTTCAATATTTACTCATGATATGGGCAAACGTTTTCAAGT
TCTATGTGTTGTGCTGAATCATGAAATCTGCCTTGATTATTTCAAAGTTATTCTGGAAAT
CCGTCTCTAATTATTTGAAAAATATTCTTTCAGAATGAACTGTGGCTGAAATGGGTGGAT
TTACATATTGATATGCGTCTAGATACCTACGGTTTTGAACTGGTATAGAAGAAGTCATAT
GTAGTGAAGCCTTTTGGTTTTGGCGTCGGATTTCTCAGCCTTCTGATTCGTTTTATCTCA
GCCCTTGAAAGAAGGTCAGCCTTCTGATTCATTTTATCTCAGCTCTTGAAAGAAAGTCAA
CGCACACACGCCATCCTTCCTTTGCTTTCATCATCCACCTTTGCTTTAGTTCCATTGGAG
CACCAGGAGCTGCCAACGAGAGCTCCATTGGAGCATCGATCTGCTACATTACAGCTTCAA
GCCCGTCGATGAGACCGGGAGCCGCAGCGAGAGCTCCACTGAAGCACCGAGCACAAAGAG
CGTTGCAGCTTACACGACCACCGACGACAACGCAACATTGGGAGCCCCCGGCAAGAGCTC
CATTTGCAGCCCGCAGCCGGCAAGCTTGACGAGGTAGCGCACTTTTTGTGTTGCGCTGAG
AGCGCCGGCGAGCTCGATTGGAGCACCGAGCGTTGCATTGCAGCTTCGACAAACATCGGC
GAGCGCTGCAACGCAACACAAGGTGCAGCCGACGAGAACGCCATTGTTGCACCGCGGCCA
ACGAGCTTCATGGGTCACGGCGCCGCTTGTGCTTCACTGCATCTCCGCCGTCGTTGTATG
ATCCACGGGGACGCAGCTCCCTCCGGCAATGAGCGGTGCCCTCTTCCGGACTGCCTCTGT
TGTGTTGCAGCACCGGCGACGAGCGGTGTCTGTTAGAGTTGTGTCAAATATTATTATACA
AGGTAGTTTACAGTTGGATTTGAAGTCGTACGGTGTGTAACAAGGTAGGAGCCGTTTTCT
TTTAGTACACATGTACCCTTATGCCTCTTATGCAATGAGTGGGTAGACATACCCACACAC
GATGTAACCTATGCCAACATAATAGCACGGGTATGCAGGGGAGTCGGCGGCGTGTGCCGG
CGCCAGGGCGGCCCGGGTGCGGTATTGTGACGGTGTCA