Contig Data
morexGenes
Links



Map Locations of contig_49288 (5911 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_49288

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64763 3 1882 bp AK357119 Available Available None





CDS Structure of MLOC_64763






Contig Sequence (5911 bp)

>contig_49288 5911 assembly3_WGSMorex_rbca.fasta
GGGCGGGGCCGGCGGTGGCGGCGGCGACGACGAGGAGGCCGAGAGCAAGGCATCCCCTTT
CGGTGAGGCCCTCTCCATCTGTTGCTTCCCGATGCGAGCTGGTGCACAAAGTAGAACCGG
AAATTGTGTGGCCTTTGTTGTGCGATTGGACTTGGAAAAGCTTTTCCTTATGGTCTGATG
CCGTCGGGGGATTGAAGGCGACCGTAGTACAATCGGTGCCATTTTTGCAGATTGCTGCTG
ATTCCGGGGAAGGTTAGCCGACGAGTGAAAGCTGGGGATTCGGGTCTAGTTAGTAAAATT
TGAAGAGTAGCTCTGCCTGACCCGTGTGCAATGGAACTGTTCCTGATGCTATTGGCTTCA
GATGGAAATTCGGAGAATCGGTGTTGATTCTGGTGTAACTGGTGGATGAACCTTGGAACC
ATTGTGCACCCTAGGCCCAGGCATGGTTTCGTGTTTAGAGTTGTTGATGAATTGATCTAC
ATATTGAATTGTGAGGTGTGGTACTATTGTCTGTATGGATTTTCCCCCAATTGCAGAGTT
CCACTGTCCATATTCTTTGATAGCTTGGCTACTTGAAGTCAACACAAAGAAAAACACCAT
CAGGTGCTGAGCTTTTCAAGTGAAAGTAGTGGATGGGGAAACTTTAGGTTCTCCAGTATT
GGCTATATTAAATTAGAGTTCATTCATGGTGCGGTGTTTTTACGTGTTGTTGCGAAAGTG
TCAACCAGAATGATGGCTTGGCCTCATTTGCGTCGCCTCTTCATGCAGGAAGTGGTGATG
CATCTGTTCCAACAGGAGATAGCTCTGGCGGATTGAACAAACCACCTGATGAATCAAAAT
CCACCGAGCCAATTAATATTTCAAACAGCAATTACTGGAGAGACGTCAGAGCAAACCTTG
TGCGTCGGGAACAGGTGAGGGTGGCACATTCGTAGTGACAATCCATAGAGCTCATAAATT
TTCTTTAGGTTCTAATAAACCACAAATTGCATGTATTTAGGCAATCTGGACATTTATGAT
CACTTGCTGACATTACTCATTTTCTGCCAAGAAAATTAGGAACAGTGCATTGATCTTAGC
TACTTTCACTGGTTGTATAATGTATTTTTTGTCTATATTGATACCGACATCTGTTATGGA
TGATATTGATGAAACGGTGCTGTACTAGTATACTCTGAAGAAGATGTAAATGCACAATGT
CTTCAATTAGGTGTTGCATTAAAACATGACTTATTCTAGAAACTTATGCTTTCCGTTATT
ACTTGATATAGTGGTTCTCAAATGTAAGGTTCCAAAAAGGTATCCGTGCGAAAAGTTTTA
GAAGAATTACGCAAATGGATCTTCTCTGGTAACTTATGCAGTACTATGTTGGATCAAGAT
TTTGTCAGATAAGCTGTTATTTCTCAAACCTTGTTACATTTACTTTAAATACCTTTTAAG
AGAATTTCAAATTGTTATTAGCACAGAGCTAAAATTCTTGAAAAGAAAAGAGAAGCAAAG
CAAGTATCTTCTAACCAACTTGGGTTATACATATCATATCTGTTTTTTTTTCTGCTTTAC
TATTTAAATCCTTGGATCAGGAGCTATTGGTAGATCCAAGTGTTCCTGCAGAGTCAAAGG
CGTCCTCCGGAGAAGTACTACACCAGCTTCCTCAAAAGTGGGCTCACCCTATAACAATGC
CGGAGGCAGGGTGCGTCTTGGTAGCTACTGAGGTGCTCGATGACGACAGCGTCTTTGAAA
GAACTGTTATTCTCCTGCTCAGACTTGGGTCGAGAGGTACCTTTGATGGCCCATTTGGGG
TCATCCTAAACCGCCCACTTTACACGAAGATTAAGAATGTGAATCCATCATCATTCCAAG
ACCAAACAACCCCTTTCGGCGACTGCGCCCTCTTCTTCGGAGGCCCTGTGGACATGAGCA
TGTTCTTAGTACGTACTAAAGACAGCTCACGCCTGAAGGGGTTTGAGGAGGTGATTCCAG
GTATCTGCTTCGGCTTTCGGACGGAGCTGGAGAAGGCCGGTGTTCTGATGAAGAGTGGTG
CGATCAAGACCGAGGACCTGAGATTCTTCGTGGGGCATGCAGCCTGGGACTACGAGCAGC
TGTTAAGCGAGATCAGGGCTGGATACTGGGCTGTTGCTTCCTGTAGCACGGAGCTGATCA
GCGACGCGGTGTCGAGTGATCCTTCCTGCCTCTGGACCGAGATACTGCAGCTGATGGGAG
GGCATTACTCGGAGCTCAGCCAGAAACCGAAGCAAGACAGCTCGTAGGAGTTGCCCCGCA
CGCACAATTGCGCCACGGCTATTGTTGTTGCCAATCTGTACATAACTGGAACCAGTGTAC
ACATCTCAAATGGAACTCGTCTAGGGCGTAAATGTTATGGTTCGTTCCTACTACTGTAAT
AAGCTTTGTACAGTCGGTCCATAGGCGAAGTATAAACAGTGGGAACTGGGGTTTCAGTGA
AAATCTGGAAACCTCTTCCTTCATGGTCCATATAGTCCATTCACAGCTAAGAATCTGCAG
ATATTGCTGCTGTGCATAGGCGGCTCGAAAGCAAATTCTGCGTAATGTTGAAGCGGGAGT
AGTATAGTTTCTGGATTCTGGTTATCAGAAGAGCTTGGAGCAGCCAAGCTCAGGCATGAT
TGCATTTGTCAGATCCTTTTTTGACTTAAGATTAGTAATACTCAATCATGCTCTGCATTT
TTTTTCCTATGTCCGCTGTCCGCTGTCAGTATGGTCAAAATCCGCTTTTCATTGGCCTGA
AAGAACCTTTTAGTCTTCTGGAACATTCGGTCGTGTCAAACCGAAGGTCAAAAGGCAACG
TCATTTTTGGCTGCCAAAGCAACACTAACATTAAACAGGGATCAAACGTTCTGGTCAAGT
CACTACTACGTCCAACTCTTAGTCTTAGTAGTAGTACAATCCAATGAATCCACCGTATCC
ATGCATCTCGCGAGTGGTTCTGCATCTGGGTTCACGAACCTGCTGACCGCCGGAGCCGGC
GAAAGGATCGCAGGGAGAGGGAAGATCGCCGGCGCCGGCGGTGGAGCAGTACGTTTTGGT
TGGTTTCACAACTACCAGGAGACTCGCTCTCAGCCAGCCGAGGATTGTTGCACCGCGTCC
GCACGTTTTCTAGTGCGTGTCTATGTAGCCTGTAGGGAACGTGCGTGCATCCATGCTGGA
GCACTGAGCGCTTCGCTCTCCGTTCATCAAGCTGAAACAACAGAGAGAGAGAGAGAGAGA
GAGAGGTGCACGCACGCATTGACGCGCGCACCGCCGCGGCCGGGCGATGCGCATCGCCTC
ACGTGGACACGCTGATCGTGCGCTTCTCTTCCGGGTCCAGGTCTTGACGCCATTGACCAT
GTGTAACACGCACATGACAGGGACGATCTTCCTCGGGCACCCCTCCGGTCAAGTAGAACT
GCAAGTGCACTTCGGCCCACACAGCTTTCCTCCAGCTCCACGTAAAGTGTTATCTCAACT
GTTTCTAGCCTGCCTGCCTGCCTAGGCGACTCCTGTGCGCTGTGGCCACAAAATCTTCGC
CGGCATACGCTTTCTCCAAATTTTTTTTTTGTTGTTGTTGAAAAAAGAGAGCTACCTCTC
GGATTTCGTATAACTGAAACCACAAAATGTCTTTTCACAAAATATCAGCAGAAAGTAAAG
CACAACAGGAAACTATAAAACCCTAGAGCGAACTGATAAATCTCGCGATTTTGGGCATTC
ACAAGTGGGACCCTCAGATACCTGCTGGAATTTGATCTATATATGGACCAGCCCAATAAC
CATTTTCAAAATTCGTAATAAATCCTAAAGGCCCACTTAGTCGATTCGTGCAAGGCAAGA
GGTGGGACTTAAGTTTAGTCTCACATTGCTAATTTGGTAGGAGTTGGACCTTCTAATAAG
GAAGGATGTTTCCCCACATGTATGAGCATGAGAACAAGAAAGACATACACGCGCTCCTCC
GTCACCGCCTGACCCGCCACGATGTGGGTTGCGGGAATGAGTCGAGCCGATGTCTAAATT
AGGAGGTCGCTCCTCTCGAGAGAGACACATCAGAACATGATCTTCCTCTCGCCATCAAGT
TTCAATTTCTGCTCCTAGGTTCTTCCTCATCCGGAAGAGACTTGTCTTATAATTGCTATG
GTAGTCATGATTACTATTTGTGCTAGTAAAATCACATGGTAGATCACTCATATATCCAAA
AACCTTATTTTAGGCAATTTACCCAGAGTGGTTTTGCTACTTCCATGAGGCCTCCTATGT
TTGAGGGTGTGCACTATAAGAGATGGCGTGTGAGGGTTGTTGTATGGTTTGAAACAACGA
GCTGCTATGATGCCACTCTTGGCAAACCTGAAGGAATTGTTGATCCTCAGCAGGAACTAG
TTTTTCAGAAAACTGGTACCTTGTTTAAGGCTGCTCTCCCGAGTGTTCTTGGCGAGAACA
TAGTTGATGCTTATGCATCAATTGACAATGGAAAAGATATGTGGAGCGCACTCGAGGCCA
AGATTGGAGTCTCGATGCCGGCACTGAGCTGTATATGATGGAACAATTCTATGATTACAG
GATGACTGATGAGCGCTCCATGGTTGAGCAAGCTCATGAGATAAAATCATTTTCTAGAGA
ACTTGAACACTTCAATTGTATGATACCGGAGAAGTTTTTTTGCTTGAGGTATCATCACTA
AGCTTCCTCCCTCGTGGAGGAACTCTGCTACCTCTCTGAAGCATACGAGGCAGGAGTTTT
CCGTTCTGGATCTCATTGGTACTCTTGATGTGGAAGAAAAGGCAAGAGCAAAAGACATGC
GTGCTTGAGGTATTGAGGGAGGTTCCAGTGCCAACCTGTTACAGAAGAAAAACTTCCAGC
CCCACAAATTCAAGAACAAGGGAAAGTTTGATAGCAAGGGAAAGTTTGATGGGAAGAACA
AGGCTTTGTAGCACACCAACTTCAAGAAGAGACTAGCAAGAAGAAAGGTATTTGTCATGT
CTGTGGAGATACTGATCATTGGGCACCTAGTTGCCCTAACCTTTATGACAAGCTTCAACA
TAGGAAAGGTGACAAGATTGCCAATGTTGTCATTGGTGACGTTGAGATGAAGGATGTTGG
GTATGGTATACTTCCCACTATTCTCTCAGTATGTCGATCCCTTGATTGGTTGGTTGACAC
GGGTGCTAATGTGCATGTATGTGGTGATATTTCCATGTTTTCCTCTTATTAGGCCGCAGG
GACTACTTCCATGTTGATGGGCAATGGTTCAAGTGATTCTGTTCGTGGTGTTGGCACGGT
CGATCTGAAGTTTACTTCGGGGAAGATCGTGCGGCTGGAGAACGTGCATTATGTCCCCGC
CGTCAGCAAAAATAATAATTAGCGGATCTCTTTTGTGTGGAGATGGCTGCAAGCTTGCTT
TTGAGTCCCACAAATTTGTAATATCCAAGTATGGAACTTTTGTTGGTAAAGGTTATGAGT
TAGGAGGCTTGTTTACACTATCCTTGTTAGATGTTTGTAATAAAGTTGTTAATCATATTT
GCAACAATAGTGAATCAAATGTTTGGCATTCACATCTCCGTCATGTTAATTTTGGTTGTA
TGACGCGGCTAGCCAAGTTGAAATTCATCCCCAACTTTACCATTGTCAAGGGATCTAAGT
GTCAAGTTTGTGTGCAAGCTAAGCAACTTCGTAAGTCTCATACAACTAGAGAAACAAGAA
ATCTTGCACCACTAGAACTCGTACACTCAGATCTTTGTGAAAGGTGGAAAGAAATATTTT
ATGATGTTAATCGATGAATCCACTAGATACTACTATGTGTATCTTTTAAAATCAAAAGAT
GAGGCTTTAAACTTTTTCAAGATCTATAAAGCTGAAGTGGAAAACCAACTTGATCGGAAA
ATAGGTCCGATCGTGGTGGAGAGGATTTTTC