Contig Data
morexGenes
Links



Map Locations of contig_49262 (5381 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_49262

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64744 4 2608 bp MLOC_64744.1 Available Available LOC_Os07g40160.1, FRAME:-3, EVALUE:4e-17, 13107.m04172 protein expressed protein





CDS Structure of MLOC_64744






Contig Sequence (5381 bp)

>contig_49262 5381 assembly3_WGSMorex_rbca.fasta
ATTTTTTTTCTGTTGAAAAAACGTTTTTTATGACTTATAGGTGGCATTGATGGGTAATTT
TAGTCAACTTTAGGGGTAATTTGAATGACGTACGGCAGAAGCAATATTTGCTTTATTAGT
ATAGGTAAGATTTACTGGAATTTCAACTTGGTGGTTCATTCCACATGACCAATACAAATT
CAAGGTTTAAATTGAACTTTTTCCTTTTTAAAAATGACGAGCACATTTCCAATTTGGTGA
ACCAAATTTGGAAATGTGAAAAAAAAATGAAGAATATATTTTCGATTTGGAGATTTTTTT
CTGAAAAACGTGACTACTTTTTTTTAGTAAGAAAAAGGATAAAATAACCTTGAAAAAAAC
AAAGGCAGATAATATAAAATTATAAAATTGTGAATTTTTTTGAATTGTGAACAAACTTTA
AATATGAACAAAGATATAAAATTTTGAACATTTTTTGAATTGTAAAATTTTTTGAAACCG
TAAACATTTTTGAATTGTGAACAAATTTTAAACCTGAACAAATTTCAAATTGATGAAGAA
AAATAGAAATTTGTGAACATTTTTCGAATTGTAAACAAATTTTGAAACCGTAAACATCTT
TTATATTTTGAAAAAATGTTGAAACATGAACAAATTTTTAATTCCTGAGAAAAGTTATAA
AATTATTAATATTTTTTGAATTGTGAAGAAATTTTGAAACTGCAAACATTTTTCAAATTG
TGAACAAATTTTGAATCATGAACACATTTCAAATTCGTGAACAAAAAATAGAAAATTGTG
AACAAATTTTGAAATCATAAACATTTTTCGAATTGTGAACAAATTTTAAAACCATGAAGA
TTTTTTGAATTATGTTCAAATTTTAAAATTTTAAAAAAGTTAAATAAATTTTGGAATTGA
AACATTTGTTAAAAGTAAGCTTGACAAAACTAATAGATATAAAAAGAAAAAGGAAAGAAG
AACGAAAAAAGAAAACAAAACAGGAGAGAAAAGAAAAAATAAAGAAGAAAAATAAACAGA
AAAACGAAAAAAAAGAAAAACTAAATGAAAACCGAAAAACCGGTTTAAAGAAATTTCTAA
AAGTTCCCCCAAAACCAGAAAAAATAGCTTAAACCTCTAAAAGGTTATCAAAACCGGGGC
GTTGGAATGGTAAATGGGCCGGTCGCACGCCTGTGGGAAGCGCCGGCAGTTTGGCGAGCC
TATTCCCTGTGGCCTGTCCTGGTGGAACTTTTTCTTTTGCTACTTACTCTTTTCCTACTT
AATTAATTAATTTTTGTTCCTTCTTATTTTTCTTTCTTTTGTTTACTCCCTCACTTGTAT
TTCTTTCTATTTTTTAACACAGTGAAAATACCGTGATGGCTTTTATATTGTTCGTCGGTA
GAATTTTATCCGAGTCCATATATTGCACAAATTATTCACCTACTTTTGCTTCCACAACCT
ATATGAATTTTTTTCTGGTAATAAGAGATGTTTTGGTACATAAACCAAAGAAAAATAAGC
AAGATTTTTATTCGAATTATGGAACAATTATGAAGAATTAGATTGGCAATATTTTGTGAT
GCAATAAGATTCTTATACTGCTAAAATATTTAGAGAGGGAGTACCAAGCTGATAATTGCA
TGAAAAAGATTTGATAAGCTATCTGAACGAATTGATGATGAATGGCACAATGCAGACTTC
AGGAGTCCATCAGTTGCCTGAGGATAGAACCTATACTATTAGTAAAGTGAAGATTGGCCC
ATCAACTGCAACTACACTAAAGAAAAGCAAACGCATTGGTGAATGGTAAAAACTATCTTC
TCTCAGAGAACAAACAGACTGTGCTGCAGTTCGAGATGATACAATGTATGTTTAGAACTA
GTATTTGTGCATGTACCTGCTGTTTCAGTAGTTCATCCACTATCCTATGTTTACTTCCAA
CAACTGTTCTCTACTTACTGTGGCAGCCATACAAGGCCATTTTGAGCTTCTGATAGCCTA
CTTCTCTGGTTGGGTGATCAGCTGCACCTCTATTACAATGCCCAGTTGAAACACCTCTGA
ACACATGCATTCTGTAAACAGGATAAAATCTGTGTAGATGTAAAACACCTGCCAGGCAAA
AATACGTAAAGAATCTACAATGCCCCTCTAGAAATAGCAACTACCGACCATGTCACAAAT
ATTTATAAGCAGAGAACATCTAGGTTAGTTCTTTAACTCAAATAGGAGTGTTTTGTAAGC
AGAAAACATCTTCAGTTTAGTTGTTCTTTAACAGCATTCGTGCTGCAGATTGTGTTTCTG
CGGTAATGGCCAGGAATAGAAGGAACAAACAACAAATGCAACTAAATGGGAGCATTATGA
AAATAGATGAAACATTCCTTCATATCCTGTTCTAAGCCTAGGCCACATCGTGCAGCAGCT
CGACAAACCGCCAATAAGCAAATATAAAACTGTTTCTTGCACAGTACATGGCGTTGCAAA
ATTAACAAAGCTTACGTAGAACAACGAAGCATGCTAATATGATCGATGTTCCAAATGCGG
GAGCTAAATTCAGAAGCTGGTAAAATTTGGGCTAACATTTACTGCTGTCAGAAATTAAGC
ACCACATTGCATTGCAAGTATAGTAATACAAGAGAAGAACAAGTGGACACACCTAAATAA
GATAGCATCAAGCACAGTAGATGTACCATTAGGTTGATACCAAGTACTAGTAGTAATTAA
GAATGCAAACTGCAGTTCCACAACAGGTGATCTAACATTAGAATCATCCTATTGTTTTAG
GCTTAACATAAGGCAAGGCATAACCATAGTAGCGAAACAAAAGACTAGAAAGACAACATG
AAGAATTACTTAGCAAATGCATAGCCTTCTTATCGTCCGGTCATCGAGAATTCACTATCC
CAGAGCTGAATGAAGATCTGCTGGTGCCAGCGCCTTATGAAATCTGTTGCAAGGCCAGTT
GAGAATCCGGGGTGTTGATGGTGTAGCTGGAGAGGAAGTGGATGATGGTGTGAGGACGGT
CGGCGACCAGGACAAACTTCTTGTCCTGCTTCACGAAATCTGTAGCCTCATAGATCCTCT
CTATTTTGTTGTCCCTGATGTTGCACTTGCAGATATGAGCGGACGAACCCAAATGTTCAG
TGTAGTACACACAGTCTGCCTCCGTTCCTGGGAACTTATCAACATCGACGGAGAAGCACC
TGTGGTCACCGATGAAGATGGCAAATCTTCCTGTGGTCTTCACACGCCAGAGCTTGCCTG
TGTCGGTGTCGAATTGGAGGGCAAAGAGAGAATGGGCTTCATGTGCATTCAAGAACTTCA
AGACGATACCTATATCCCCATCCAAATCCACTAGGAAACACCGAATGGCGTACCCATGTC
CAGGACGATCAACCGAGAAAACCTTGGTCGAAACCCGATAATTCAGAAACTTGCCTAAGC
TAATCATCAGCTCACGAACTACGGATAATTCAGAAAGGCTTGCATAGGCACCACCCACGA
CCGCCTTCCGGAAGTAATCGAAAGCTGATTGCTGCTTATGCTTGTATCTGACGAACCTTT
TACTGTGAGGAGCCGCTGAGTAGGCCTTGCGAGAAGAGTCGCAGAACACGGCGAGCCGGA
CCGAAGAGCCGTGGGGAAAAGTGAGATCAGCGACTCCCACATCGAGGGGCACGGGCGCCG
CGAAACGGATCACGACGCCGGTGAGGGGGTTGAGGACGCGGGCGGCGTGACGAGCGCCTT
TCTCCGCCAGGACGCAGTAGCCGCTGTGTGTGGCGGTCACGGCGTGGTAATCGCCGAGCT
GCGGGAGAATCTTGCGGAGGAAGCGGCCGGTGACGGTGTTTACCAGGTGAATCTCTTGTC
CTTCGCTCAGGAAGACCTCTTCGAGGACGATCCAGCAGCGCGGGCGGAAGCGGGGGTCGG
AGGCGGCCCTCCTGGGGTCGGCGGTGGCGGCGCGCCAGCCGGAGCAGACGGCGCGGTAGT
CCATGTACCAGTCGAGGTCGTTGGTGGCCAGGAGGGAGTCGGCGACGCGGCGGACGAGGT
CGGGCGGCAGATCGGACCAGCCTGCGGGCGGAAGGAGCGGCGAGGTTTCCAGACAAATCG
GGCCCTCCTTCTTCCTCTTCGCAGGCGGGGGAACAGGGTCGGCCATGGCAGGGGGAGGAG
GAGGCGGTGAGAGGGGGGGAGGGAGGGAGGTGGGCCGTCTGGTGGTGTGTTTGGGGAGTG
AGGCGCCGGCGGCGGCTGATTTGGGGAGGAATCCACACAGATTGGGGGCTCTGCCGCTGT
GTATAGGCCTAGCTACTATGTGTGCTATTTGGGCTGCTGTAAAAGAGAGCGAGCGAGAGA
GATCAAGGGAAATGACTAAATAACATAAAACTACTAGCGTAAAGATTATGATTTCAGAAA
ACTACCGAATTTTAACTTTTTTCAGAAAACTATCAAACGTCGTGGTTCGTTGTTTCAAAA
ACCTAAAATCTTTGTTGTTAAAAAATTAAACAGGTTTATGACAAGTCGGGTCCGCACCTA
AACGATTTGTCTATTTGACCGTGTGTTTGGCTATTAACTCACTTGTAGGGCCTACATGTT
AGTGTGTAGAAAAGCAATCAGGTCATCGGAAGTCTTGTGAAAAAGCAATCATGTCTTTAA
AATATTTTTGCAAAAAACAATCAGGTCCCTCCTCGGCACCCCCGTGCTCGGACTCCGCGG
CTGGGTCCTCCTCGCCGCGGCCGTGGCCGCGGTCGTCATCGCCGTCCTCGTGCTCACGGT
CTGCTTCTGCCTCTGCCGACGCCGGCGATGTCCCCGCGTCGCCCTGAGCCTGCGACGATG
AGCCACGCCCGCAGCGGCCGGATCTATGGAGCGTTGGTCGCCGCTCCTTCCACCAACGCA
TATTCTTCCCCAACGTGCCGCCAGCCTCCGCCTGCAGCCATGGCACCCGACGTGTCGTCC
TCCATGGAGCCATGGCGCCATCGGCCAGAGGTGCTACCCCGCTGACATGGACGGTCTCTA
TGGAAGGGAGCTCCACGAAGGCGCCCACGATGGAAGGGAGCTCCACGATGGTGCCATGGT
TGTTGGTCGTGACGGAAGGGACCTCCACGGCAGCGCCATGGTTGCTGGTTGCAACGAAAG
GGAGCTCCATGCGCCGCCCCCGACGGAAGGGAGCTCCACAACAACACCATGGCTGCTGGT
CATGACGAATGGGAGCTCCACGCGCCGCCCGTGATGGAAGGGATCTCCACGGCGGCGTCA
TGGCTGCTGGCCGACGACCGTCACGGCACCTGCTGGCGCACGGCCACGGGAGGGACCTGG
TTGCTTTTTTCAAAAGTTTACACGGACTCGATTTCGTTTTTGAAAATTTGCGGGGACCTG
ATGTAAGTGCATCTAGTACCCCTTAGTGATTTTTGTGGTTT