| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_49178
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_64679 |
1 |
900 bp |
MLOC_64679.1 |
Not available |
Available |
LOC_Os12g19470.2, FRAME:+1, EVALUE:3e-108, 13112.m02066 protein ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_64679
Contig Sequence (2794 bp)
>contig_49178 2794 assembly3_WGSMorex_rbca.fasta
TTTGGTTGTGGTTGGGCTAAAAATGACACTAAATGGGTATGGTTCAAGTATGGTTTTGAG
AGATAAATAAATGGGTATGGTTCAAGTATGGTTCAAGTATGAAACCATTCTCAGGTTGCC
GAGTAGCATTTTTCCTCCATACATGTTGTATATGTTTCCTTCCGTGTTAAGCAACAATCC
TTGAGTTAGTACGTGATGAGGTGTTGAGATTACTTTATTTCCTCTGCAGTTTTCAATTAA
CTATAAATGTATTTGTGTGTTAATTCCCAACAATACATTAAAAGATAATTCTACGTGAGA
GACATCAAGTAGCTAGCAATGCCATGTACAGGAGTATCTTAATTTTGAATCAAAAAGTAA
GATTGCAAACGAAGCCCAAAGTCGACCGATTATAACGGTGACACAACCATCTCACAAACT
TTGTGCGCTGAGACATGCGACCATCATATCACGGACATGACTTCATAGGCGGCATATCAA
CCATGTTGGATGAAGGAAGTCGTGTTTACTCTGGAAGTGTACCTAAGGCAGATGCCCTTT
CACAATATATAATCATCTCTAGTTTCCCTCAAATAAAATTTAACTGTAGTTAGTAGGTGT
AGCAATGGTGATACATCTCACTATCTCACCAAATATACGGTACAGCAAACCTAGAGAAAA
ATGCAAATGGGCTTGAGTGCAAGTAGCCAGAGTAGGACCAGCAGCAGGGCAACACGGCCA
TTGATTCTATGGTGCAGAGGATAAGGTGCGCAGACATGTGGTCGTTTATCTCGACCTTAT
CAGGAGGCCGGTGATGCGCGGGGGCTAATCGCCGCTGCGGAACATCAGCCACTCCTTCCA
CATCCTGTTCAGGAAGGGCCCAAGGGTTATATAAGCCTTGCTGACCCAACGCACCAGTCC
TCAAGCCAGAGTGCCTCCTTCTAGCAAGCTATATACCTACATAGTACAGCCATGGCCCCC
ACCGTGATGGCCTCATCGGCCACCTCCGTCGCTCCTTTCCAGGGGCTCAAGTCCACCGCC
GGCCTTCCCGTCAGCCGCCGCTCCAACGGCGCTAGCCTCGGCAGCGTCAGCAACGGTGGA
AGGATCAGGTGCATGCAGGTAAACAACATCGTCTCTGTCTTTCTAGTCATTTTTAAGCTG
ACCGATGTCAAGAAGAACAATCAAACGTGTAGAACTAGAGTTATAGTCACTTAATGTATA
GATGTGAATCTGATTTGCAGGTGTGGCCCATCGAGGGCATCAAGAAGTTCGAGACCCTGT
CTTACTTGCCACCACTCAGCACGGAGGCCCTCCTTAAGCAGGTCGACTACCTGATCCGCT
CCAAGTGGGTGCCTTGCCTCGAGTTCAGCAAGGTTGGGTTCATCTTCCGTGAGCACAACG
CATCTCCTGGGTACTACGATGGCCGGTACTGGACAATGTGGAAGCTGCCTATGTTCGGAT
GCACCGACGCCACACAGGTGCTCAACGAGGTGGAGGAGGTCAAGAAGGAGTACCCTGACG
CGTATGTCCGCATCATCGGATTCGACAACATGCGTCAGGTGCAGTGCGTCAGCTTCATCG
CCTTCAAGCCACCAGGCTGCGAGGAGTCCGGCAAGGCATAAACAGCTCACTGACGATGGG
CCACATATAAAGTGCCATTGCAGTTTTGTCAACTCTGACATTGCTTTGGGTTTTCCTTCT
CCATTATCTTTCTTATTTGTTCCTAAAAATGTGTGTATGCCCATGTTCATGTACCAACAT
GGCTCGAGAAAGCATGCTCGTATGTGAATGCTATCGGTGGCTATGTATATGCACATGCAC
ATAATATTATACAATCTGTCGACTATGTAATATGTATTCGAGTAATTAATGAGAAACATC
TTTGCCACCGCACACGCACCTTTTATTTCCGTCGCTAGACATAGTTTATGTTGGAATAAT
GAGCAATCAAGAATACATATTGATACTTAAACTAGTAACATTGGTCGTATGAGGCACCGG
ACATACAAGGATCAAAAGACAAGTACCATCAGGTAAATGCATGATCAACACATAGAAGCG
GAGTCATCCTTGTCATTGACGATAGTCATGCACTCATGCTGATTAGCAAACGAAATTAGC
AATGAGAGGGAGTGAAATGTTCAACTCTTTGTGCAATTTCCCAATCCATGATCAACCTTG
TAACCTACTCCCTCCGTCCCATAATATATAAGATCGTTCTTCAAGTTATATAAGATCGTT
TTTCAAGCTATGTTAATTTGAAGAACGGTTTTATATTGTGGGACGTAGTAGTATAAGCCA
AAGAGGTCAAGAGGCCACACATGGAGGTGAAAGAGATCAAAACTGAGTTAGGGAGGTGAA
CAAACCGATCGACCTCCTTCCACCTTCACATTGCATGCCGTGCCTCCCTCTATTCTTGGC
TATCGTATGTACGAGGGCTCGCCTTCCTCTTCTTTGTTGCTTAGAAGGTATGGTATTTTC
TAAAAATTTGAAATCATATTTGCTTGGGAAAATAGGCAAGGGCTATTAATATTTCTTTAT
AGAAAAGGAGGATGACCCCCGCCCTCTGCATCTGGAAGATGCATGCGGTCATTTTATTGA
TTATTCTCGAGGACCTTGCAAAGTAGTACAACAAAATGTCTGAATCCGTCATCTTGGCAA
CATCTGTCGCTACACCTATGCATATGATGAAGGGGTGCAAGCTGGGCCAAATACACAGAC
CTCTTACCTGAGCCTAACATCTAAAGCCGGAGGCCCCGACCGAGCCACATACCAGGTCTG
GGTCACAAACCGGTCCGACGCACTCACATGTGTC
