Contig Data
morexGenes
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Map Locations of contig_49081 (5025 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_49081

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64612 2 1862 bp MLOC_64612.1 Available Available LOC_Os06g17410.1, FRAME:+2, EVALUE:2e-76, 13106.m01914 protein dof zinc finger domain containing protein, putative, expressed





CDS Structure of MLOC_64612






Contig Sequence (5025 bp)

>contig_49081 5025 assembly3_WGSMorex_rbca.fasta
GTAGTACTCTTTTATAGCTATCTATTGTACAAGCTAGCTATAAGATGGGCTATAAGAGTG
CTTATAGCCAGCAGTTGGCTATACTATTAACCATGCTCTAAAGCGTGCAAGCATTCCGGA
TTATCCAGGAATTTTGGAGCCTCCGAGGCACCTCCCGGTATAGCATCGGGGTGTCCAGAG
CCTCTTTGGGCTATCAGAGAGGATGTTCTGACCTCCAGGGGTTGCTCCAGCCTTTATGTC
ATGTCATTCTTTCTCTTTTCATGCTTCTCTCTTGAATGGTGCAGACTGTGCATGACCTTT
TCTTTGGCTCTTGTCGTCTCAAACCTAAAGATGTAAATGATGTAGTATACCATCACCAAT
TATGTTAGATATGCACGCGTAGAAGCCAAGATTCACCTTTGCAAAACTATATACGCATAT
CACGTGGGGTTGATGCATCTCATATGGTCACGTCCATAGTCTGCTCCACACGAGCACTGT
TGTACAACCCATTTCTCGTGGACAAGATTTGGTTGCGTGGTGAATACCAATTTAGGATCA
TTTGCCAAGACACCGAGGAGGCACACAGCCAAAGGAGAAAATAGAAATAAAGGAAAAAAA
AGCAAAGGTCCCGCCACACGGATTAACTCCTATCAACAACAACACTCATACTACCACCAA
ATACAACACTCGTAAAACATAAAAGGTCTTAAAAACAACGTCTCCAAAAAGAAAACAATG
CACAAACGTCGTTGTTGCCCGATTCAAGATCTTAGATTTTCGCCTTGGAGAAAGTATGCG
CTCTTAAAACAATTTCTTCAGAAAGGCAATTGCCAGGCACAACTAATAAATGCCAGAACT
TAGGTTTCACCCTCAAAGTCACGACTTGGCATCCGAGGAGTGCCAACAACGATGAAATCC
TCCAGTGCTGCCACCCTCACTTATCACTAGTGCTCCTGAGAGTTGTCTAACATCTGGTAG
AGTCCATCGCCTCCAAGACTCCGTCTGTGTAATCGATCCTACAATCTCGGCCACCATGAC
CTTCTCCACCGATGTCTCCACCATGGAAATCAAAAAGCCACCATGTCCCAAGGTGTCATC
AGCCAACGGAGCTTCATGCCACACCCTCGGAACCTCATAGGCTAATATAGACGTACAGGA
CCGGAAACTAACTGATCCAAATATTCTGAGCAAAATCTCATACGACCATTCTGGAATAAG
TCGATGGCCACATAGAGGAGGACCGATCATGCATTCATTGATGTGATGTGAGAACAGCAT
GAGGGCAGCCACCTTTATTATCATGATAGCAATCCCCGACGCCACCCCGATCTATATGGA
CGTACACGACCGGAAACTAACCGATCTAGATATTCTGAGTAAAATCTCAGATGGCCATTC
CGGAACACGTCGATGGCCAGATAGAGGAGGATCGATCATGTTGTCATTGACATGATGTGA
CAAGAGCACGAGGACCGCCACCTTTATCATCACGATAGGAGGCCCCAACGTCGCACAGAT
CTAACCTATCGTCGGCATCACGACAGTTCCTAGCAGCCGACGCCATCAGGCACAACCGCG
CCAGCCTGGAGTCACGTCCGAGAGATGTTGACCTGCCCAACCATATTTGGGCCACGCAAG
ATCGATGGTCATGTCTGCAGCAACAAGGACGCAGCCGCCGTGCAGCAGTTGTGCCTCCAC
TGTCAACATCGGTTTATGCTCGTTACACGGATCCCGACGCTCCATGCAGCCGGATCGTCG
CCAGACCATGAGTCTCCGCCATCAGAGGAGTACGGGGCCGCCACGCGCAGGAGAAGGCCA
CCAACCCACCTCACTTGGACCGCGGTCATCGCGTGCCAGATCCAATCCGGTGGCACCGAG
ATCGGCCGACACCCAGAACGGTGGTCTTCCTCCTACCACCATGAACGGGGCCGGGAGGTT
GCAGATCCGCACGGCCCCCTTTACCAGCGACACCAGGCTTTGCAAGCGGTGGCCTCGGGG
GACGAGGAGGGGCGAGAGAAGGGGGAGGTGATGGCAGCTGGTCTTAAGGTTTTGCCCCTG
GTCGCATGGAGAGGGCGACCCGAGGAGCGGTTCCGCGATGTGAAAAGATGGGGCAGCGTC
ATTTCCTTCACTAGTTGTCTCTAATACTTACACCATGGACATGTAATTATGCACATGTAT
TTTCCTTCAGAATTAAATCTTTAAATTCATTAAATCCCCAATTGGAAGCCCCCTTGATCA
ATTGAGGTGGAATTGGTTCATGATTTTAGCTCGATTAACGATTTTTCAAATCTATTATCA
GCAAGTATCCTACTCAGTGCAACAATAATTCTGACTGAGTATAACAACACATTAGTCATG
CACACCCTCTCACCACTTGACAGAAAAAACACCAACAACCGGTATTATAGCCCCAATATA
ATACACACAAGGACCCGAGTAAGAAACTTCCTTACATACGTATAGGTTGGTTTGTAGATA
ACACATAATCATATCATTAGAAAAGGCGTACCAAAATACCATATTATAGAAAGAAATACA
CTCTATTATCTCTCACACTCTCTGAAATCAACAACAACGATGACACTGTGAAGAACACGC
AACTTCTAGAGTAATAAGAACTACACTTGTCTATTTTTTAAACATAATAAAATCATACAT
GTTCACATACCCACATCTCTATGGTGCGTGTTCTTGAGAAGAAATCTCCTCCATTGAACA
AACATTACCGAAAAATCTAAAATAAACTAAAAATATGCTACCATCAATGCCAAATCCAGA
ACTTGAATCTTCGTGGACAAGCTCCATCACAGGAAAACTAACCACCCCGGTTATGCTCAG
TTCACTAACCATATTTGTCTTATCTAATGTCTATTTTGCACGTGTGTTTCATAAAATAAC
CTATTTTCTTAGTCCAAAAATAACTGTCTCAAGTTTAGCATAACTTTATATTAAAGCTAG
TATAAAGTTAAGACTTAAGACACTTGTTTTAGGAACGAGCGAGTACCTTCCAACCAATCT
CGCGGCAAAACGGCAATAGTGTGACGTGGCGGCCCGGGGAGGAAGATGGAGCGCGCGCTC
TGAGGATATTTACACAACCGCTTCTGTGATGGAGAGGCCCAGGCCGAGCAGAGCAGATAG
ATAGCAAGCTTCGAAAGGTAGCTCCCTCCCCGCGGGAGGCTCGGCCACCATTTATCCCCT
CCTAGAAGCATCCTGAGGCACGTGCGAGCAGTGCACGGCATGCAGGAGTTCCAGCCCATC
CCCGGCCTGACCGGGCGGCTGTTCGGCGGCGCGGCGGATCGTCTGGCGGGCCTCCTCCGC
CGCGGCGGGGAGGCGGCGGCGCAGGAAGAGGTGCGGTGCCCGCGGTGCGACTCGGCCAAC
ACCAAGTTCTGCTACTACAACAACTACAACCTCTCGCAGCCGCGCCACTTCTGCAAGGGC
TGCCGCCGGTACTGGACCAAGGGCGGCCTCCTCCGCAACGTCCCCGTCGGGGGCGGCTGC
CGCAAGCCCAAGCGAAAAGCCGCCGCCTCCTCCTCGGACGTCGACAAGGACGGCGCCGGG
GCCAGCGGAGACGCCAAGAACGCGCACTCCGGCTGCAGTGCTGGCAGCTCAAGCACCACC
TCCGCTGCCTCGTCCGCTTCCACGAACACCGTCGACGTTGGTGCAGGTGCCGCGGCCTAC
TCGAACGGCAGGAGCACGCCGGCCACGGGCCTTTGCCCAATCACCTTCACGGCAGACGCG
CCGCCTCTGCAGCCGCCGGCGCCGATGTTCGCCGACCAGGCGGCCACGTTCGCGTCGCTC
TTCGGGACGCCGCGTCCGGCCTTCACCTTCTCGGCGCAGCGAAAGGCCGAGGACGACGTC
GCCCCTGCGGTCACACTCACAGAGCAGCCGTCGTCGGCGTCCTCCACTGCAGACATGGCG
CCGTTCTCCGCACGGTCAACTGGCGCGGCGACGGCATCACAGTCAGACTGGCCACCGGCT
ACGATAATCGATGCCGGGATATTCGACCTCGCCGGCGCCGTTGGGAGCGACACGACGTCG
TACTGGAACACGGCGAGCTGGACGGACCCGGATGGGAACGTGTACCTGCCCTAGCGCGAC
GTGCGGCGAGGATCGTGCGCGCGGCCGCCCGCTCAGCTCCGTCGTCGCTTGCTCGAGCTT
CGGTCCAACCGTCCAAGGCTTGTCTAATCATAACCACCGCTCTCTTAATCTATACTCAGT
GTGCCGGCAGCTTGGCTGCTTCTGTGATTCTTTCGACGTGGAAGTTTTGCACACATGTGC
GTAGCAAATTAAGGCTGAATTTCGGTTTTATTATTACTACGGGTTTGTTTCCATTTGTTG
AAACTAGTGAGCTACAATAAATCAGTGTAAATATCATGATCAGTACTCCTAATTATAACT
TCGGCGGTGTCGACTGCAGTGGTGTATTGATCGGGCTAGCTCTCCATCTTTGTCATGACA
CCCTGAGGCAGACGCAATGGACTGGCTTACGTCAATTGCTTCTCGGAGTAGGAGGTTGTT
GGTTCAGCATGGCCTATGACAACTCGGAGTAGGAGGTTGTTGGTTCAGCATGGCCTATGA
CAACTCGGAGTAGGAGGTTGTTGGTTCATCTTCGCCTATGACAAGACAGTGTGACACGCT
CTTCTACTTACTCCGGATGTGGTTGTTGCTTTAGCACGACACATTTCTGCTCTGCGGTGC
TGTGCATTCTTACTCTCTTTTTTTCTAAACCGGAGCCGTTAAGTCAGAAGAAGAGAGTTG
TCCGATAATTTTTAAGAAAAAGACAAAAAAATGTCAGCTAATACGATAAGCATACACAAT
GGAACACATACCATGATGAATGAAGAAAACCTCGTCGGGGTTTTACTTGAACATCGTTAA
CTCATCATCATCACTTCTTCTTGAGCAACTGACTTTGACTTTACTGCAAACGACTACCAA
CCAACAGGTTCGGGCCCGGAAAATCCGGGGTTCTGTGCGAAACTAAAAATTAAGGTCCTA
TCTCATAAAAAACTAACGAACAATTATAATTTATATATATCGTAT