Contig Data
morexGenes
Links



Map Locations of contig_49076 (4895 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_49076

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64610 1 1262 bp MLOC_64610.1 Available Available None





CDS Structure of MLOC_64610






Contig Sequence (4895 bp)

>contig_49076 4895 assembly3_WGSMorex_rbca.fasta
CTGAAATCCGCTTATCACAGCCTTCTACTCCTCGTTGGGTTTGANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATACTTGTGGGTCATCAGTCCCCAACAAACCAAATAAAC
AATGCCAAATCCGTAGAACATGTGAGGCAACAGCTTCAAGCACAATGATGGGTTTATTTG
TCGTTGGTGTATTGCTCTGTCCAAGCCACCGGGCAGTTCTTTCACCTCCAATGTATGTGA
TCAATACTAAGAATACTAAGCCCGCAAGAGTTTCATTTTTCTGGGGGGTTTAACCTTTTT
AGCACTTCAGAGAAAATGTCGTGTGTGCGTGGGGTGTTTCCCTCCCTCAGTTCGCTGCCT
TTCATCTCACGGCTTTGACCATTTAATAGTGAAGTGTGTCTGGGAGTACTAATGTGAGGG
GCGGGCAGCATATAGTGCATGTGCTTCCAGAAAAATTAGACATGGGCTGCATGTGTGGGC
TTGCTTTGTCTCATGTGAAAGGGATAGGCTGACTGCATGGGCTCTTTTTGTCCCATGTGA
GAAAAATATGTTGTCCTATGTACGAAAAATTTGTTATGGGCCTCTTCTATTGTGTTTGCT
GTTGCATGGCTCATGCATGCTTCCATGTTTGCTTTCTCCTAGGCTATATTGTTGGACACG
TTTGGGTTCTTCCAGTTTTTTTTTTATCTCCTATTGTCTGCTTATAAGTAGCTTCTTGCT
ATCCATTTTTATGTCCTTTTCATTTGTGTGCTCTCCCTTATGGTTCGTGCTATTACACAT
GCCTCCTCTTCTTCCGTTGGTGCTTCACATCGGAGGTTGGCTCCTAAGAGTAGTCCTAAT
CTCGATGGGTACTATTTTTTAGGAGTATGATTTGCTTATTTTTGTGGTATTTTTTATTGT
GTTCATGGTGCCTTGTATTTTTAGGTGTGAGGGCTGATGATGCGCGGCAGCAGTCACAGG
AACGTCAGGATGTTCGTCGTGGGAAATGTCATGTAGATTCATCGTTTGGTGGGTATTTGT
TGCTGTTCTTCTTTGTCCTTGTTGTGTGTGTGCGTTAACAACTTTGCTCCTTCTCTCATG
TGTACTTCATGTCTGTTTAGGCTCTATTATTGTTCGTGCCGTTGCACATGCTTCTTAGCG
TGTTCGTGTGATGTGCTTGGGCTCCTCTTCTTTCGTTGATGATTCTGATGGGGGGTTGGC
TCCTGATGGTGGTTCTATTCCTGGTGAGTATTGTTCTTTATGTAATTTCAATGGCATAGC
TTGATTTGTTGTTTTTTGTAGTCTTTTCGATTGTGTTTGTGATGCTGTGCGTTTTTAGGC
TTAAGGGATGATGAGGCGCGACGATGACTCCACAAATGGACACTCCTCCTTCGTCGTCTT
CCTAGCATGCCCCTCCCTTCATCTCCTCTTCGTCGGGTCATCAACCATGGAGTAGGGAAG
TGCACACAGACGTCGTGACCGATTGAGGAGGAACTCGCTTCCGTGCGGGGTGGCAGCATC
CTGGATTTCCTTCTCCCGAGGCGACGCGGTCTTCCCCGGCACAATTGTTTCCCTGAGGAG
CACCACCATGCCTCGCCATCAGATGGGTCACTGCAAGTACTTCTCGATCATTCCTACCAC
CACAATAATCTGCTGGTTCTTCAATTCCCCTATCACCTACTAGCAAGGTCCACCTCTGGG
TAATCTCCCTTGGGTTCAATTATGGCTTCTCAAGCACCCTATATTTTGCCAGTGATTTTT
TTTCATGATAGACCTGCGTCTTGTGGTGGTTCACCATAGAAATACCTATTTCTTCACTAC
TTTTTTGATTGTTTACTTGCCAAAGGTTAGATTGGCAAGAGGTGGCAAGCCAGTAGGAGG
CAACCTCAAAATTAGCGGCGGTGAGCCGATGACGATAGTGGTGGACACAATGGCCAAGGG
AAGTTTTTATTTGTGCTGCTTGTTTTTCTGAATTATCCGGATCACAATCACTTGAGTATA
CTGTTTTTGCAGTTTTCAGATCATCCATCATTGACACCTACAAGATCCTAATGCCACGGT
AACTAAAGCAAAGACTATGCTAACTAATAAATCAGGTATATTTTTATATTGTATACTATT
GGACACTTTCAGTTTGATTGATGTTCATCAAGCTATATATCGTCTTACATACAACATGAT
GCTTATATGTGCATTCTATAGGATTTAGTACCAATCAAACTAACAAAGCACTAACACTGA
CCAAAATACTATGTTGTAAGGTTAGGTCACGTGCCAACAACCTAGATTTACAACATCTAA
ATTAGGTACTTGCTTGCACAAACTGGATATTAATTGCTATGTGGATTCGTGGAAATTGTC
AGTTTGATTGTTACAGTTACTCAAGCTTCTTTTGTCACTACTAGAAACTAACAATGAAAA
CGCCATGTCCACATAACTGGACCAAGTGACTAAAAAATTACGAGATATGGTACGACTTCA
GAACTAAATTATTTTTGTACATGTAGAACAAAGTTACATGTATGGCTTACAAGTTTCTTG
TTATTTCAGAAGTGAATTTTACAATAGATAGACAAAGGAGCAAGGGAGCATATATGTTGG
CTTCCACGGTTCTCTTAGGAGCACTCATTGTTACTTATGGTTATCTAGACTAATTGATGC
AACTTTGCATCAAAATGGTATATTATTGTTCAAGCTGAATTTCGTAACACATACTTGCAA
TCTTGCTTGGTTGTTGAGAGGAACTTTTGTCTATTTACGTGTTTCTTTCTTGAAGAAATC
CTATGGAAAATTGAAGTCGCTTCTTGACCGGACCACATGTCAGTTTCTGATTTCCATCCT
ACGTGTTTCTTTCTTGAAGAAATCCTGTGGAAAGTTTATGTGCTAACCATTAATAGGAAA
ATATTATCCTTTCTTTTATTAAAATATAAGTCATCAAGATGAGGTTTAAAGCCCATTGTC
TAAAAACGGTGAAACCATCTCTTCTTTGATCTATTTAGCTTTTAATTATTGACTGCAACC
AAAAATCATGTTGTCATTTTAGTAATGGCATAGCCGAACGTATTTGCTATGACATGCATG
TAATTCGCATTTTTATTTTGACCGTTGTCATTCCTATATGGATTCATACCATTGCGGGTT
CTCTTACCTCACCCAATTTCTGTCTACAGATTTTCTTCAGCAATCTGCACAACTGAATCA
ACAATTATCCAACTAAAATAGACTCCTGTTATTAGTGGCTTAAGAACAACTCCAACCGGC
CGACCCAAACTGATGCGCGCTATGTCCGCATTTTGTCCGTTTGGGTTGGCCCGGAGGACA
TCCATGTCCGCTTTTGCAATTGGGTCGGTTCTTGCGCCTAACGCAGCGAGCGATCCATTT
TAGGTGGCACAAAAAAACCAAAAGTAAACATTTTAAAAATATAGGAACCATTAATTAAAC
ATTTAATGCCGGTCTAGAAAGGCGGCGATAGTCCACATTACATTAAATATAAAATTAAAT
AAACAAAAAATAAGGAGGTGCGCCGCCCTAGGCGTCCTCCTAGTTGTTGTCGGGGCCGGT
GAGGTCGACGAGCGTCAGCGTCGGGCCAGCCCAAGGGAAGGCCGTCTCCAAGGCGGCGAT
GACGTTGTCCGTTGGTGGTTGCACCGGCGCTCGCTGGGCAGCATGTCGCTTCTCCTCCTC
AGCTTCGGCCTCGCGCTCCATCAACTCGATCCGCCGGGCCTGTGCGTCCTCCTCTGACAC
TCGTCGCTGCTAGCAGTGCTCGAAGTAGGCCGCCTCCGGCTCCAACGTCGCACCGGACTA
GATGGGTGGCGCGCTGACCTACTCGTGCACCACCCTTTCTCGGGCGTATAGCTCGGGCAT
GAGGACCACCGACCCTGGCTTGATGGGGGCGGCGGGGCCAGCGATGGCACAACACACTCG
TCGGCAGTGGAGAGTGCAATGGCCTCCGCCAACTTCTTCTCATAGGCCTCCTCCTCCTCC
TCCTTTAGGCGCACCTCCTCCTCGCATGCATGCATGACAGCTGACGTTGTCTGGGACTAA
GGGGTCCTCGGGTCGTCTATCTATTCTCATAAGCGAACTCTCGGGCATGTTCGGTCATCA
TTGGAAGTATCGGAATCAAGATGGACTCTTCTGAAGACTTGGCATAATGATCCAAGGCAA
CATAGTAATCGACATATTCCTTCTCTATTGTAAACAACTTTGTCTAACTCAAGCACCCCT
GGTATCTATATAAAACCGGGGGCATAGTTCGTAGGATACATTAAGCTCATCACTGTTAGG
GCTTTTAGACCACAACATCCAATCTTGAGAAAGATCAACTGTGTACTCCATACTATTCCA
TCAATACCAACAAGAGCAGGACGTAGAGTTTTACCTCATCAAGAGGGCTTGAACCGGGGT
AAAATATCGTCTCCTTTGTCTCTTGTTACCCATCAACCCAAGGTCCACAGTTTGGACCCC
TACTCGAGATCAGCCGATTTTGACACCGACATTGATGCTTTCATTGAGAGCTTCAATGTA
GGGTCGCAAGAAGGGTTGATTGCTCGCCTCATCATAAACGCCGACATCTGCATCGGGCAG
ATCTTTGCGTTCGGCAGCATGGTGCTGCATGCCGATCCAACTGGTCACTTAGACCGGGTT
GGAAGCCTCGCCCCTGATCAAGAGATCAGGTTCGGGAACTTAGAGTTTGTCACCGATCAC
CGGGAGACCTTATTCTGACAACACCCCTCACTTTTGATGCATGATACTCGTGATCTGCGT
TGGTTTCCTGTGAAGAGGAACATGTTATCGCAGCACAAAGTGGGTAANNNNNNNNNNNNN
NNNNNNNNNNNAGGTTTATCAAACTAATAGGAATATCAACCACAACTGCCTTCAACGGCT
GCACACAAAAGAACAAACAGTTTGCACCCAACGCG