Contig Data
morexGenes
Links



Map Locations of contig_49037 (5897 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_49037

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64590 1 1872 bp AK362143 Available Available None





CDS Structure of MLOC_64590






Contig Sequence (5897 bp)

>contig_49037 5897 assembly3_WGSMorex_rbca.fasta
TCACAAGCTCTTCTGATGAGGCAATTTCAGGATTACTAAAAGATCTAAGTGTTGAGTTTG
CTCTTAAGGATCTAGGTGAACTCCATTATTTCCTAGGAATTGAAGTGAAGAAACACAATG
GTGGACTTTATCTTTCCCAGGAAAAATATGCTACAGATTTGGTAAGAAAGGCGGGACTAC
AAGGTTGTAAACCTACACCCACTCCATTGTCTAGTATAGAGAAATTGTCACTTATGGAAG
GAGAACTTCTCAGTGCAGATGACAGTACAAAATATAGAAGTCTAGTAGGTGCTCTTTAGT
ATTTGTCACTTACAAGACCTGATATTTCCTTTGTTGTCAACAAAGTCTGTCAATTTCTGC
ATGTTCCTACCACAGTTCACCTAACTGCTGCAAAGCGTATAATCGGATATGTGAAACATA
CTTTGAGCATTGGTTTGAATTTCAGCAAGTCACCTTCCACTCTTATCAGTGCCTTCTTAG
ACTCAGATTGGGCAGGATATCTAGATGACAGACGCTCAACAGGTGGTTTTGCAGTCTTTT
TTGGTCCTAACCTTATATCTTGGTGTGCCAGAAAACAAGCGACTCTCTCTAGATCAAGTA
CTCAGGCAGAATATAAGGCATTGGCCAATGCAACAACTGAAATTATATGGGTGCAACCTA
TGTTAAAGGAGTTGGGTATAAAGAGCTCTAAAGCTCCCTGCTTATGGTGTGACAATCTTG
GTGCAACTTACTTGTCTGGTAATCCAGTTTTTCATGCCAGGACAAAACATATTGAAAATT
TTCATTTTGTCAGAGAAAGAGTGGCTAATAAAATGGTGGACGTTCGGTTCATCCATTCAA
GTGATCAAGTAGCAGATGGGTTCACAAAAGCTTTGCCTACCAGAAGCTTCGAAGCCTCCA
AACATAATCTCAACTCGATGTAGTTGTGATTAAGGGAGGGTGTCGAACATAATAGGATTT
CGGTTCAGGCTACATGACTTGTTCATCAAGGAGTCTAGTAGAGATAAGATAGAATCTAGT
TTAAACCCTTAACCTCTCTATCTACTTTCGGTTGTAACTAGATTAGACTCTATCTCTATT
CCTTGATCTTCAAGATGTACTTTAAACATGTATGGACTATTCAGGTTTCGGTGCCCCTGC
TATATAACATGCAACACGTCCCTCACATCGAGGCAAGATGTTTTCCGCAACTCGCACACA
TGGCACCAGAATGGGCACTAAACATATATGCCGATCAATGCGAAGGTCCATGTTTACAGC
TATGAAGTTGTGCTTCTGGAAATTGTGATTGGAACTACGGTTTCGAGTGGCATAATTGCC
AATGAAAGACAAATGGAGTTTCCAGACTTCATCCAGGAGGCCAAACAGATTCTGGCTACC
GAGAATATCAATGATCTTGTGGATGCAAGATTGAAGGGGCAATTCGATCTAGAGCAGGCT
AGTGCAATGGTGAGAATAGCTGTTTCATGCCTTGGAGACAGAAGCAAGAGGCCGACAATG
GATGAAGTTCTGAAGTCTCTTATGTCATATGATGATGAAGACGACCATCCTGCCTATTCA
TATTGATATGCAGCTGATGCAAAGATTTGGGCTATACGCCCTGTGTGTGTCAACTTTGTT
GATGTTACAAGCCAATATGCATAAGTAGATAAGATACAAAAAATTGTTGTGTGCATTTGC
AAGAAGCTATTGTAAAGTGTAGCAATTTTTTGTGTTTCAAATGCAACAAATAAACAGTAC
TTCCTCCATTTTAAAATAAGTGTCGTAGTTTTAGTTCAAGGAGGGAGTATGATGGACTAC
TATGTTCTTACATAACGGCATCAAGTGTTCTCATAACAGCAATGCTTTCCTTTTATCAAC
AAATTTGGTCAAAGTAGAGAGAAGGGGGCAACTCAGTTACATCTATGTTTTGCTTATCAC
GCACAATCACGTGGAGGAAACAAAACATCTCGAGTCTGCACTCTACACACATGGTTCGTC
TTAACGCAGAAGAAAATAAACAGCCCATTAAGATGGAAAAAATCTCAGCTGTTTACATTG
AAAGAAACTCCGTCAAACACACCAGCTATTGCGTGGTGTTTAGCTGGAAAGATCTAACGA
TTCAGATTAAAAGTTGGTCACCCATTAGTCTGTACCAACGATTATCCAAATCAAATGTGT
TGACAACCCATTGCTATAGTTTGAATCAACATTTCCTTCATTCCAGCATTTGGTCCATTT
CATAAGGAAACAGATCAACCAATCGCCGACGAGGCAGACAAAAGAGACAAGACTTCGTCA
AAGGCGGAAGCACACCGCAAAGATATCACGGGAAGTAGGAAGTATTCTGCAGGAAAATCA
GGATTTAGTGCAGAATTTCTCTCGTTTCCGTTTGAGTTTTATTGAGAGGGATGCAGATGT
TGCAGCCCATCTTTGTGTAAAAAGGCGTAGGTGCTTATGGCTCAATTACATCCCTCCTTT
CCATGCTGATACTCTTCGGCAAGATTGCAGTTCAGATGATTGATCAATAAAGCTCATTGA
ATCGCAACAAAAAATGAAGCTAAATCTAGTACATTGCGGGCAGTAGGGCTGTGGCGCCGC
CGTCGCGTAAGTTTTTTTTTTTGGCAAGCGTAAGTCCCGAGTGGCCGTCAGCCCACTATG
AACGCTTTGTTGCCCCTCCGGCCCATTTAGGAACGGGGTCATTTTATTCTATGCAGTTCT
CACACACATGTTATCTAAAATAAAAGGGGAAGTGCCTTTCTGAACCCGAGCTCAAATACT
CCACTCCCAAATAAAAGTATGTTGACTCTTCTAAAACAAAAGCATGTTGATCACAAAATT
TCCTTAAAAAAATGTTGATTTCAAAAAACTAAAAAAACATGCTGATCTCAACCAAAAAGT
TCTCATCCACATGTAAAATATCCCCTAAGGAATCGCATGTAAAATATAGTCTCTGACAAC
AAAAAGAGCAAAACTCTGTCAAAAAATGTAAGATATAGCCAATATATCCCATCCATGATA
GTTACGACAGCATCAGATGTTCATGTTCAAAAAAATTGTACAGCGACATTACCCAGCATT
ATCTACTGGGAGCTAATGAGAACACAAACAACAGCTACTCGGTTGCTCAGATGACCATTA
CAACTTGATTTTCCTTGCAAATAAATCAGGTTAACATCTGAAACATGGTAGAGGAAGGGA
TACTTAGCCGCGAACAACATACAAACTGATTACATTTCAGCAGATAAGATGCATGTCCTG
CCCTATGTCGATGTTATCAGGATCTTGGGAACAAGTTAAACATCATGATATTCTCAAAGT
TCCATCCGCGGATCTTAGGCCCTCACAGCTGCCATGAGTTGCTGCAAGCACGTAGCGTAC
TGAACTGCGGTGTGCTGGAAAGAGTAGTGATCCGAAAGACCATACTCTGAGAAATTAGAT
TCCACATGGATGAATCGACCAGGCAGCGACTTCTTTGCAAGCGTTTCCTGCCATATGTCA
AAGAAGTCTACCATAATGGCCCTGGACTTTTCGATGGAAGATAGGGGGTAATACTCTACC
TGCACGAAAGCAACATAAACCTTCATGTCAGCCTTAAACGCGGAAATTATCTCTGACAAA
AAAAACTGGATTTCTTGGGGGGTTCTAAAATTTGTGTGAACCAGTGGAACTTATTTTTAA
AATAGAACCGTAAGTGTAATATTTAAAGTATCCTCCATATCCATGCCACAGAAATGTTCA
TCTGCTTTGGTGGGAGGTTTTGCAGGTTTGGGCCTAAGGTGAGATTTTTGTCCCTGGTCA
ACATATTAGATTCAACAACTTCGAGCGCTAGTTTCGAAATTTCTTGTTACAAAAAATACT
GGTAGGGGCCAGAAAATTTTGTTAACGAGATTTGTTTCCCTGCTAACTCGAGCAACCGTG
AAAAGGGAAAGGCACTGATGCTTCCCAAATAGAAGAGTTACAGACAGGTCCATATAACAA
AATCTACTAGAACTCATCTAGTTTTCCCCTTCTTCCAATGGAAAAATTGAGCTAATTACA
CAGACAAAGGTGTAGATTATAACATATGTTTACAGGTTAATGAATATGTCCAAATAATGG
ATGGTCTTATGAACTTTTGATAGAAAGGATATCAAGAGCCTTACAAATTTAAAGCTCATA
AGGTGTACTTCAAAAACAAAATCATGTAGGTGCCACAGATCATCATCTGCATCTGCTAAG
TTCATCAAGCTCGACATGGGTAGATTTATCTAACTAACAATAAAGCATAAAAAAAGGAAG
TAGGCTGTGGATTTGTACTTATCAATAGAGAATTAGGCTGAGAATCTAAGCAGCAAAACC
CCATTATTAATTAACAGTACTTCGTACTTACTCAAACTAAACTACAAAAGTGATCCAATG
CATTTGGTCTGAGTCTCTTTTTTTAACTAAGAAATATCGATTCCCTAAAAAAAAACTAAG
AAATATAGATAATTAATGAGTCCATACGATTAAGTCCAACAGGGTATGAACAGAGAATGG
AAAAAAGAAGAAAATAATAGCAATACCTCCATCATGATTCCTCTCAGTGTTTCAGTATTG
TTAGGAACACATTTTCCAATCCTCAAGCAAAAATCACCGAGTTGATACTGGAATCCCTAT
AAATGGAAACATTGTAACATGTGAATCTAACAAACTTTTCATATAAGACGATGCAACAAA
CACACTGTAAGATAATAAGCACAATATAAATAGAACAGGAGATGAAACTTATTACAAAAT
ATTTAGGACAAAATGAGGGGTTAACAGAACACAAAAGATAAATATAAGCAGCATCCAAAT
AGCTTCATCGCGAGACTCAATGATCAGCTGAATCCTATGCAATTTTTCGTCAATCACTAC
TAGCTGGATGACACCCACTCCCTGAAATTAGAAGTCAAACTGGAGACAGGTGGATCGTCT
ATTTTGTCACTGTTGTTCACTTGAAAGATGAAATAGAGTAAATTGCCAAAAACCACCACA
ATTGCGTCACTCAGTGACGAAAACCACCGTTTTCATAAAAGTTTGCTGAAAACACCGATT
TTGAGTAATTGTTTGCAGAAAGCACTAAAAACGACGTTTGACCATGTTTTGACACAAAAA
CTGACAGCGGGGCCCATCGGTCATAGCCACGTGGCATGGGATAACGTTTGGGTGAGACGG
TCAATGTTGCTGCCATGGGGGGTCCACCTGTCATAGGAAGAAAGAATAAAATAAAAAATG
CTCTCTTATCTCAGGCCGGCGCCTCGATCCGCCGCCACGCACGGGAGGGTCGGCAGCCAC
ACCAGCCGGAACCCCGCCGGTCGGCGAGCCAGGGCATGAGCAGAGCAAGGAAACGGCCGA
GACGCCACTACACCATCGACCTCCTCCACGACGCCCCACACCCATTGGACAAGATCCCGA
CCATGTCTACTCACGCCTGCTCCCCCTAGCGCCCTCCCAAGGTCCCACCCATGGTGCACC
GCCACGCGTCAACTTCGGCGTGTCCTCTGCCGCGGGAGCCTCCTAGCCCGACGCCATGCT
CTGCCTCTCCAAACCACCACCACCAGCGCCGGCGGCTGGCAGGGATGTCTTGGCCGGAGA
CCATGACGGCTTCCCGGCCATGGCGTGCGTCGGGCGCGACGATGGTGGAGCTCAGGGCGG
GGGAAGGGGGTGGGGGCCTCAAGACCGCGTTGGTGCATGGTGGTGGTTGGTTTGGTGGCA
GGCTCCGGACTGCCCGAGGTGCGGGTTGGGATCGGGGGAAACCCCTGTCGGCATGGCCGA
CACTGGCGCGGGGGGGGCCGGGGGGGGCCCCCCACCCTCCCGGGGGGGGGCGAGGGGGCG
CCCAATAAAAATGTCTTAAATACATTTTAAGAAAGATTACAAAGATCACTTAAATCCAAC
ACAAAAAAAATATAAAA