Contig Data
morexGenes
Links



Map Locations of contig_49013 (7409 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_49013

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_64576 2 2050 bp AK251346.1 Available Available None





CDS Structure of MLOC_64576






Contig Sequence (7409 bp)

>contig_49013 7409 assembly3_WGSMorex_rbca.fasta
GGCATAAACTATGCCTCAACAACAACGTGACTTGATTACAGAGATGCCTAGAAACAGGAA
CGAGAAAAGAGAACAAAACCAATAACGAAAAAGTCGACATAGTGAACATGATATTGATTA
ATGGGGATGTCGATAAATCTCACCTCGGCGCAACGGGCAACACACACCTCATTTCGCGTC
GCTACGTCCATGTCGCCACGCCCGCGAAGCACGACTGCCAAAAGCTTGTTGATCAAGTAG
TTGATGAGCATGTCAAAGAAATAGCACGAGCGAGTGCCGCAAACAGATACCCGATGACTT
TCTTCCTCTCGTGCGACAGATTGACTGCCATGTCCGACAATGGTTGGGAAACAAATTGTT
GGGGAGTGGAGACAAAACACCTATCTAATCTATGTTGTTTCAAACAAATCTTCACAAACG
TGCAAAATTCACGGTAAAGGGTGCCCTCCCGACCTACGCTAAGCTTCACTAGTGTATGCT
ATGGAAGAATCAATTGAACCTCTAGAACTAGAGCAACACCAAACTTTTGTCAGCACTGAG
CTCCGAGTCTACATGAAGCGCAGAGTGAGATGATGTTTATTCTCAGATTTTTCAAGGAAA
CAGATACTAGAGCAGAAAAGGGAGCGCATGGATAAATAAGTTGCATGAAAACACGTATGC
GAACATGACCGCGGATCAGACAAGCTACACAAACCATATATGGTCTATACTATGAGTTTT
TTAGTACACCATGAATTTCTTATTATAGAAAATTGGTTCCATTCCTATCAGTTTCTAAAA
AAAAAATACTAGTTCATTGTCGCGGTTTCGGTTTGATGGAAGTGCTTGAAGTCGATCCTG
ATCAACGATGAGGTTGCTTTTTGTTTTCCACTCCCTGACCGGTGTGCATTTTTTGGGGTG
GATTCTATATGCCACCCGCGGGCAGCAAATAGTAGTCGCTTCGGCCGCATCTCTTGTCAG
AGGACCGACCAGTTCACAGCAGCGTGTGATTCGATGTTTGTTTTTTCTCATTTCTTTCTT
CTCTCGCTTTTCGGTTATTTTTTTATTTTTGTTAGGATTTGTTTTTCATTTTTTTCTATG
TGTTTCTTGTTTCAGTTTTTTTCTTCTTGTTTGTTGTTTTCCGCCTTAAGATTCGTTTTT
CTTCTACTTTTTTCAGGATTTTACTTTTTGTATTTTATTGTAATATATAGTGAATATTTT
TAGAATGTGATGAAGATTTTAAATAACACACGTAACTTTTTGTATACGATATTTTTTCTC
AAAAATACACTGAATATTTTTAATATATAACATCATTTTTGTAATATAAATTCAATATTT
TTAGTTATACAGTATGTGTTCAATACACTGAACATTCTATATTATATATTGATTTTTTCA
ATATACATTGAATTTTATTTTTAGAAGACATAGTAAACACTCTTCTATAAACCTTGATCA
ATTTTTACTAAGTTATTAAATATCTAGCTCCTAAAAAAACAGATGTGCTTTTTTTGGTTT
TTCTTTTTTGAGGGGTAAGGCTAAACCCGGGCGTGGGCAGCCCGGCCCGAAAGCCCGATA
TCCGGGCCGGGCTCGGGCTCAGCTTTTTCGCCCAAAGCCCGGCCCGAAAGCCCGAAAATG
AGCCCGAACAAGACCTTTATTAGTATTTTATGTAAAATACAGGTATAATATATATTTTAA
ATATCTCGAAAATCATTATTTTAATCAATAAAGTGCACTGTTCACATGTTTCAGGCCGGG
CGGGGCCGAGCTTGAGATTTTGCTGCTGGGCTTTCCAAAGGCCGACCCGGACCAAGCCCG
GCCCGGCAAATGCCCAGGTGTAGGTAAGGCTAACTTTATTGATCAAAGTCCACAGTTGAT
GAGATATAATTAGGGTCATGTGGTTGGTTAGACTAAACATGACGACCTGAGCTAGATTAA
GAGTATGCCTTGCTAGCCTATGTGTGTCATATGTGCCTCGACTGCCCCTTGATGCCTCTC
ATGATTTATTTTGCATCAAAAGCTATAAAAAACTTTTGCAGATGAAGATCCTCTACCAAT
GAGAGCGCTTCGTGAAATGTGATTGCCTCTAGGGTAGGTGGGTCTTGAACACCACCTATA
ACAAGAGATGAGCCACCTAGGAAATTGCCATCGCCATCTTGTCAAGCAACAGACGCTGCA
CCTCTCTTGACCTGGATCTTCGTGATGACAAGGGTGGTGCCTTCGGGCGTTGGACAAATG
CGCTGGTAGTGGTGGTTCTTGTCAAAGTTATTGCCGATTTCTTTCCTTGTCGAAGCAGAA
CCATTTTTTTGGTGAAAAATCGAGAAGAAAAATTAACTGTTTGCTGGCAGAGTGGGCCGG
CCTATTTTCCATGGGTTTAGGCGGAGGTGCCCCTATTTGATGCGCATGCGCGTGCAATAG
GAGCTCCTCTTTGGGGAGATATGGGAGCTCCTATGCAGTGCTGCAGGCGCCCGTTAACAA
TCCGGCGTCTGCAGCGCTGCATGGGCCGGCCCACTAGAATGCTGTTCAGTTTTTCTTTTT
AAATTTTTAATGAAAAAAATATAAAATCAAAAAAGGTTTACAGATTGGAATAAAAAAGGT
TCATCCATTTTTTTAAAATCCCATATCTTTAAAAGGTTCATCAATTTAAAAAGAAGTTCA
TTAAAAATGAAAAAGTTCATACAATTTAGAGAAAGGTAATTAAAATTTTAAAAAGTTCAT
GTATTTTTTTTAAAAGTTCATAAATCTGAAAAAGTTCATCCGTTTTCAAAAATATGTTAA
TCAAATTTAAAAAAAAATCATCGATATGCAAAAAAACATCAATCTTATAAAGTATTCATT
GAAATTTTTAAAAAGTTTATCAATATTCAAATATATTCATAATTGTTTTTAAAAAGTGTC
AACGCCTAGATGAACCGGCCCAGTTTGAACGCAATAGGTTAAAATAATGCACGTTAACTG
ACGTCTGTGACGTCAAATAGGAAATGCCCTGGCTGGACCCCGGCAACGAGAACAGCAAAG
GAAACGGAAGCTCGGCGGACATTGACTGGCCTTAGTAGGTCAAGTTCTGGCTGGGCCGGC
ATTGACTGGCCCACTGTGGTTCCGGAGAGGTCACAGCCTTTCACAAGACGATATTTCTTT
GTCTCAAAAAGAAAAAAAAAGACGATATTACTTCTCAGCACAGCATCAACACGGCGCGGG
TGAGGACGATGATTTATTAGCACCACCTCGCCCGGGCAGGGAAGAGCAGGTACCTGGGAC
GGATACAAATAGCACCCGTGGTGGGATGGAGAGAGCACGCAGCTGCGTGACGAGCACAAA
GCGAACTATTCTTTCGCCTTTTACTAAAGAATACCGTGTGCACGCCACATTAAGCAGCAT
ACCCTAATTTTTTAAGGGCGCCTTCTCTTTCGGAGAAGGTCCCAACAAACATGAATCGAA
ACTTTTAATTTACTACTCCCTCTGTTCCAAAATAAGTCTCAACTTTGTACTACCTCGGAG
GCAGTATTATTTAAAAGCTTTGGGCAGCTCTTTGAATGATGGTTGGTGTTTCTAGAACTG
TAAAAATGTCCTCCTGCCTCATTTCCTCATGTGTAAGATTCTATCTCTACACCTCAAAAC
GAACAAAATAACCTTCTTCCATCAAGAACAGGCCTTGGCCTCGAACCTCGGCAGGACCAC
AAACGCGATCGACGTCGGGGCCAGGTGCACGGGGGAATCCACGGCGGCGGGCACCGGGTT
CATGGCCGGGACGCCGCCGTCGTCCCCCAGCTCCAGCGGGAGCCCGTTGAGCAGCATCGT
CCTGCTCTGGTGGTCGCCGTCCTTGGCGGTCAGATGGTACTCGTCCCTCTTCATGCTCTC
GCTCGACGGCTTGCTTCCCAGCCATGACACCGCTCTTCTGAGACCGCCGCCGTGCCTCCG
GTGGCCGCTGCGCCTCTCGACGCTCACGTTGAGGTCGTTCTGGAGGGTCACGTTGTACCC
GGTGCTGTTGCTTAGGTTGATCAGGAGGAGCGTGATCCCCTTCTGCATTGTGGAATAAGC
AAGCTTTGTTCAGAAACAGCAGAAATGGTTGATCTAGCACATGCTTCACTGATAGTTGAA
GTAGCTCTTCAGACACAACAAAGTTTGCAAACTAGAACAGACAAATCTAAGAATATCTGA
AACTATCTCAATCAGTTCGCTTTAAGAAGGTCAAAGCGTCGGATCCTTACGTGTCGCTTG
CTGCAGTGGGCATAAGCACGCATCTTACGCGGTGCATTGATATCGACTGAGAGAACTCCA
TTGCCCATAAGCCGATGCCATAGCAGAGCACTGAGAACGAAAGGAGGGGTCAACACATAT
GAGCCATGCTCTGGAAAACACTGCAGCGACCGCAGTTTACAAATGCGAGGCTTGCCTGTA
GTAATCAGGATTTGGTAAGAACGTCTGTGTGTCAAGCAGTCCGTAGTTGCCACCGATGAG
AGTCTGCCTGCAGAACACTTTTGTGTTGTACTTAGATGCCATTCCAAGTTGATCGAGATA
CCTGTTTGCGTCGAAATCATATCATGACTTTTTTCTCGCATAAGATACATCTGAAACTTG
TCTAAAGTTCATGAGAAAATGTTGAGAGCTGACCATATGCTGTTCATGAAAGTATTTGAT
ACCAGTTGGCGGCCATTGTTGAATACCCCACCGCTTTCACTAACCCAAGCAGAAGCCCAT
GTCCCATGCCTGTGGAGGGTAAGTTGCATGTCCCTGTAAGTATCTTCAGCACGATCTAGG
TACTTAGGATCTACTATCTTCCTCATAAGGTGGACATCATCCCCTGAAAACAAAGTGTCA
CTGCTGATGCATTCTATATATTAATCACATTAACTGACTGAATAAATACTATTAGGATGT
TATGCACCACTATTTTTATTTTTTAAGAAAAGCCTTGCTATTCCTATGGAAGCCTTATTA
TTCAGGAATTTCATGAAGCCTTTCCTTCACATTATGTATCAGTATCACAACTCACAACAA
GCACTAGAATTAAAACAGCAAGGCAATATATTATTTTATTGCAGAAGACAACCATTAGCA
AGACATGTACATAACATTAGTGAAGTCCTGCCTACAAAATTCTCAGCGCCACTTCTTCTG
ATATCTCATGCAAAGCATCAAGATATGATTTTGGAGGACCAAAATGAGCCTTTTCTAAAT
GCCACCAGAGAAAAAGCAACATATCACATACCTCCACCAAGATTGTAAATATGATGTGTC
AAGGCATTAACAACACCATGACCTGAAGTCTGAAGTAACTGAGTGTACCACTGTTGATCA
AAGAATCCTCCAGGGGCTAACAGCAGTGGCTGGGATAGCGGTGCCCTATACAACTGCCGG
AGTATGGATTTAAGTTCAGTCACATCCTTTCCATAAAGTTTGGCATCGACCCTTGCCCCG
GTTCCATGCCCACTCAGCTCATTACCTGACAAGAAAAGAATATTCATGCCTTCAGAACTC
AGAAGGGATAACATAGAAGAGCTGAGCACAGAACACAAAAAGTACAGTAGATTACCGAAT
TCCCACGAGTCAACTGGATATCCTTTTGAGATTGTGTATTTGACAAAATCATAGGTGTTT
GTAGAGTTCCATTTTCCCGCCCAGAAGGAACGTTGGACATTATACCTTCCATGGAGTGCA
TTCAGACCAAACGTGATAATTGCTCTGCAGATAGATTTTTGTTCATCCATGAGCTAATTC
TGCTGAGAGCTTATAAAATGAAGAAATGATGCTAAACAAGCACATGCAGCTCCATTAGGA
GTCCCTCATTGTGCACATCAGTTCCTTGTACATATATTTCACTTATTTATGTTGATAACT
TCATCTGGCTTGGTTTCACTTTTACCGTATCTCCTCCCTAAACAAAATACTAATTTTGAA
GACATGCAGAAAAAAACGACGCTGCTAGTGATTTTCTTCAACTATCAGTAGGTTATAAAA
ACATCCAGAGCAGTGATGGAAATGCAGTATCACATAGTTATGGCTATGTGAGCACAAACA
TGTGAACATCTCACACAAGTTATGCATTCAAAAAACTTAATATTAGACGCCTCACCCTGT
CTTTTGGAATAGACCATTCAGTTTGTCCCACCTATCCATACTTAGACAACCGGCGGAGAA
ACCAAACAAACCATTTGACACATTTGTGAATGGAGAGCACGGACTATTTGTCCCAACATC
GTAAACAACTCGGTCTTGCAAAGAGCCTCCCAGCCTAATCCTCAAATTATGAAACTCTGC
AGACAGAATAAAGAAGTTTATATATTCATCAAACTAACCAACTAATGCTTACAAATACGA
AAGATTTCTGCAAGTAAATACAATTATAATCCACTGATATGATATTAACTACATATGGTA
CATACTGTATTGTGTCAGAATTCTGGGGCAGTTGCCTTAAATATCTTGTGATACTCTATA
AACTAGAGACCGCAACAGGCGATAGTATCATCACAGAGAGAAAACAACCTTCTTTGGAAT
ACGAAATTCACAGTAGGTGGGCAAATTATGAACATAGATCTTCCATAGTTTAGAAAAATA
ATTACCATAGACAAGTAGCAACTACTGAATGAAGACCAGGTATTCATACCTTGAATGGCT
TGAGCCAGAAAGGGGTGATCCAAATCCTGAATAACATGAAAAGTAAGTCAGTCCACGAAC
CACAATGTGCAGTAACAGCCTATTGCTTACTGACAACAAGTCAAGAACATAATAAGCGTA
CCAAATTCAGAATCGAAGATTGCCCCCATGGGCACTGATTGTAGTTGCACTTCTCCGGCG
GCCACCAGTCAATCGTGGCGCAGATGTAATTCACATCCGTCTCAGCAATTTTAGTGGATC
CTTTAACTATGACCGTCGCCTCCTCCGGCTGCTGCTGAGCCGAAGCCGAGTAAGGAGCAT
GTAGGCAGACAAGCGCGAGGAGGAGGAGGAGAAGCCTCGTCGCCATGCTTCCTTACCTAT
TAGAACATGTATAAAAGCAAAATCAGGATACAGTTGTGTGTTGGTTCTACAAGCTCACCA
TTTCGCCGAGGGTTTGCGCATCAGATGCCAAGAAATCGTGCATAATTAACCAGTGAGACG
ACGCAACGAGGCTGAATTCGCCCAAACAATGCGCGGAATTCATAGGCCCGTATGACACCA
TGAGGCAGGCAATTGCAAATTAACGGGATTAACCACTCGGACCAGTAACAGTGGGATCGT
ACACTGGTCTGGGAATGCCGCCGTCTGTTAGAAGAGGCAAAGCAAAGATCCCAAATTTGG
CAGCTGCTAGAAAAGGATAGAAAAGATGCTAAAGTAGGAAGAAGGAAGCGAGGCAAGACC
CGACCTTTCCCGTTCCTCCACCAACCACTCCGTCCCCGTCAGGCGTCGGCAACCGGGAGA
GCCGCGCCGGCGCGGGGGGGGGGCCGGGG